Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8006F01.3
        

               Conread position:
               13-175
               

               Cow position:
               chr21:3392357-3392195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               97, 51
               

               Conread position:
               15-168
               

               Cow position:
               chr21:41537852-41537698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               42, 97
               

               Conread position:
               15-169
               

               Cow position:
               chr21:11253475-11253320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               40, 59
               

               Conread position:
               16-175
               

               Cow position:
               chr21:39665990-39666149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               39, 141
               

               Conread position:
               39-225
               

               Cow position:
               chr21:37509556-37509744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               16, 68
               

               Conread position:
               80-287
               

               Cow position:
               chr21:20776608-20776396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               146, 88
               

               Conread position:
               81-219
               

               Cow position:
               chr21:15244977-15245116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               100-287
               

               Cow position:
               chr21:1071077-1070887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               126, 61
               

               Conread position:
               582-843
               

               Cow position:
               chr21:12346123-12346392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               586-872
               

               Cow position:
               chr21:24394560-24394852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               72, 18
               
Show alignments to all cow chromosomes.