Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006F01.3 |
| Conread position: | 18-180 |
| Cow position: | chr3:52400112-52399947 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 99 |
| Conread position: | 28-175 |
| Cow position: | chr3:5449028-5449177 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 28-175 |
| Cow position: | chr3:67818293-67818145 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 44-281 |
| Cow position: | chr3:67825046-67824806 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 53-287 |
| Cow position: | chr3:25186786-25187017 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 173, 10 |
| Conread position: | 54-287 |
| Cow position: | chr3:61487430-61487196 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 96-288 |
| Cow position: | chr3:78202216-78202018 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 114, 65 |
| Conread position: | 582-836 |
| Cow position: | chr3:80268710-80268453 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 81, 22 |
| Conread position: | 582-845 |
| Cow position: | chr3:18904622-18904351 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 33 |
| Conread position: | 587-831 |
| Cow position: | chr3:7849437-7849195 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 593-845 |
| Cow position: | chr3:78912554-78912303 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 596-819 |
| Cow position: | chr3:31803132-31802914 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 610-862 |
| Cow position: | chr3:36466797-36467044 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 22 |
| Conread position: | 616-845 |
| Cow position: | chr3:18626355-18626580 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 7, 82 |
| Conread position: | 624-849 |
| Cow position: | chr3:42915339-42915124 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 34, 5 |
| Conread position: | 628-846 |
| Cow position: | chr3:74541703-74541489 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 59 |
Show alignments to all cow chromosomes.