Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8006F01.3
        

               Conread position:
               25-154
               

               Cow position:
               chr4:21400699-21400829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               27-281
               

               Cow position:
               chr4:38924304-38924563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               77-219
               

               Cow position:
               chr4:45560286-45560144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-298
               

               Cow position:
               chr4:28703258-28703472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 28
               

               Conread position:
               83-287
               

               Cow position:
               chr4:44417902-44417694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               8, 16
               

               Conread position:
               105-287
               

               Cow position:
               chr4:39139-38954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               120, 55
               

               Conread position:
               128-281
               

               Cow position:
               chr4:44648535-44648691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               452-560
               

               Cow position:
               chr4:44648903-44649011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-845
               

               Cow position:
               chr4:45434123-45434395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               81, 27
               

               Conread position:
               579-852
               

               Cow position:
               chr4:59945348-59945077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               83, 25
               
Show alignments to all cow chromosomes.