Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006F01.3 |
| Conread position: | 14-172 |
| Cow position: | chr5:45694480-45694639 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 15-275 |
| Cow position: | chr5:67954204-67954465 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 197 |
| Conread position: | 26-175 |
| Cow position: | chr5:44113936-44113784 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 26-175 |
| Cow position: | chr5:69116884-69116734 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 48 |
| Conread position: | 28-281 |
| Cow position: | chr5:45001918-45002172 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 36-246 |
| Cow position: | chr5:10037650-10037861 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 33, 77 |
| Conread position: | 145-281 |
| Cow position: | chr5:57077982-57078121 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 150-285 |
| Cow position: | chr5:24639383-24639248 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 75, 99 |
| Conread position: | 587-819 |
| Cow position: | chr5:37707102-37706870 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 71, 108 |
| Conread position: | 631-845 |
| Cow position: | chr5:61454938-61454719 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 712-845 |
| Cow position: | chr5:53900280-53900412 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 59 |
| Conread position: | 712-867 |
| Cow position: | chr5:51128983-51129137 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 152, 0 |
Show alignments to all cow chromosomes.