Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8006F01.3
        

               Conread position:
               9-281
               

               Cow position:
               chr6:356507-356780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               10, 104
               

               Conread position:
               14-287
               

               Cow position:
               chr6:26948467-26948187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               15-172
               

               Cow position:
               chr6:32921832-32921675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 85
               

               Conread position:
               20-287
               

               Cow position:
               chr6:18790678-18790937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 157
               

               Conread position:
               25-287
               

               Cow position:
               chr6:14847572-14847832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 6
               

               Conread position:
               27-172
               

               Cow position:
               chr6:2856156-2856013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               27-288
               

               Cow position:
               chr6:340581-340840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               580-843
               

               Cow position:
               chr6:35430140-35429890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               114, 37
               

               Conread position:
               582-795
               

               Cow position:
               chr6:30487086-30487301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               77, 20
               

               Conread position:
               582-855
               

               Cow position:
               chr6:27020087-27019818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 30
               

               Conread position:
               587-835
               

               Cow position:
               chr6:26838657-26838911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 15
               

               Conread position:
               630-851
               

               Cow position:
               chr6:61614616-61614834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 70
               
Show alignments to all cow chromosomes.