Cow genome map

Conread name: Ss1.1-Pig3-SRG8006M14.5

Conread position: 1-180
Cow position: chr11:35366943-35367124 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 125, 0

Conread position: 1-250
Cow position: chr11:72387872-72387605 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 93, 225

Conread position: 1-272
Cow position: chr11:81719188-81719467 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 92, 49

Conread position: 1-312
Cow position: chr11:4158845-4158521 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 100, 217

Conread position: 1-312
Cow position: chr11:13056009-13056330 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 97, 29

Conread position: 1-312
Cow position: chr11:47693534-47693207 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 78, 223

Conread position: 1-312
Cow position: chr11:78471610-78471941 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 230

Conread position: 1-359
Cow position: chr11:10134988-10135360 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 188

Conread position: 1-362
Cow position: chr11:8100279-8100649 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 26

Conread position: 1-363
Cow position: chr11:63668354-63668726 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 21

Conread position: 2-308
Cow position: chr11:34680110-34679811 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 299, 92

Conread position: 2-349
Cow position: chr11:21797695-21797325 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 269

Conread position: 2-360
Cow position: chr11:12337115-12336741 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 26

Conread position: 8-277
Cow position: chr11:19665644-19665356 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 65, 205

Conread position: 39-359
Cow position: chr11:62186701-62187024 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 67

Conread position: 93-360
Cow position: chr11:30129842-30130115 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 120

Conread position: 94-277
Cow position: chr11:61183179-61182995 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 117

Conread position: 94-277
Cow position: chr11:65720258-65720076 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 166, 42

Conread position: 94-345
Cow position: chr11:37710250-37709994 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 116

Conread position: 94-361
Cow position: chr11:62649281-62649017 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 72, 9

Conread position: 94-366
Cow position: chr11:4660548-4660826 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 29, 123

Conread position: 96-270
Cow position: chr11:37331842-37331671 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 84, 0

Conread position: 96-310
Cow position: chr11:40496770-40496554 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 117

Conread position: 96-342
Cow position: chr11:1045104-1045357 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 97-370
Cow position: chr11:82532006-82532286 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 177, 80

Conread position: 98-362
Cow position: chr11:12369649-12369392 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 176, 25

Conread position: 100-263
Cow position: chr11:21793874-21793711 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 110

Conread position: 100-349
Cow position: chr11:19684672-19684928 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 28, 61

Conread position: 111-348
Cow position: chr11:45900067-45900304 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 91

Conread position: 111-368
Cow position: chr11:35101746-35102004 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 97

Conread position: 122-363
Cow position: chr11:37329406-37329660 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 88, 38

Conread position: 129-357
Cow position: chr11:2536534-2536764 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 172, 84

Conread position: 136-360
Cow position: chr11:41534909-41535136 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 75

Conread position: 139-359
Cow position: chr11:38109103-38109319 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 65

Conread position: 140-311
Cow position: chr11:23051284-23051454 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 161, 70

Conread position: 148-362
Cow position: chr11:63674832-63675050 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 63

Conread position: 153-273
Cow position: chr11:24964184-24964067 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 153-349
Cow position: chr11:35943062-35942867 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 147, 56

Conread position: 166-312
Cow position: chr11:16295731-16295876 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 135, 44

Conread position: 166-312
Cow position: chr11:31608881-31609024 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 135, 45

Conread position: 166-360
Cow position: chr11:66492031-66492226 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 136, 44

Conread position: 168-370
Cow position: chr11:9348952-9348753 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 143, 36

Conread position: 170-367
Cow position: chr11:36261212-36261011 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 118, 40

Conread position: 179-359
Cow position: chr11:35367339-35367519 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 31

Show alignments to all cow chromosomes.