Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006M14.5 |
| Conread position: | 1-88 |
| Cow position: | chr13:44984941-44985028 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-207 |
| Cow position: | chr13:44225486-44225270 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-255 |
| Cow position: | chr13:642815-643079 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 92, 56 |
| Conread position: | 1-276 |
| Cow position: | chr13:47179390-47179130 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 155, 85 |
| Conread position: | 1-288 |
| Cow position: | chr13:3140370-3140674 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 95, 226 |
| Conread position: | 1-351 |
| Cow position: | chr13:27688487-27688851 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 253 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 101, 61 |
| Conread position: | 1-360 |
| Cow position: | chr13:30478919-30479297 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 224 |
| Conread position: | 5-262 |
| Cow position: | chr13:49507696-49507429 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 87-366 |
| Cow position: | chr13:54628952-54629236 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 94-258 |
| Cow position: | chr13:42260478-42260643 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 32, 117 |
| Conread position: | 94-277 |
| Cow position: | chr13:41204335-41204151 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 32, 118 |
| Conread position: | 94-281 |
| Cow position: | chr13:14023845-14023659 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 94-312 |
| Cow position: | chr13:15852366-15852589 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 32, 162 |
| Conread position: | 94-363 |
| Cow position: | chr13:32704516-32704766 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 94-370 |
| Cow position: | chr13:33243960-33244229 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 31, 123 |
| Conread position: | 98-312 |
| Cow position: | chr13:17490903-17490688 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 30, 113 |
| Conread position: | 98-359 |
| Cow position: | chr13:12485599-12485337 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 24 |
| Conread position: | 108-360 |
| Cow position: | chr13:58020800-58020547 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 205, 60 |
| Conread position: | 144-359 |
| Cow position: | chr13:54633250-54633032 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 155, 60 |
| Conread position: | 148-370 |
| Cow position: | chr13:44985147-44985370 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 154, 62 |
| Conread position: | 166-310 |
| Cow position: | chr13:54519699-54519555 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 85 |
| Conread position: | 166-360 |
| Cow position: | chr13:45307334-45307531 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 132, 44 |
| Conread position: | 179-362 |
| Cow position: | chr13:52416427-52416248 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 138, 41 |
| Conread position: | 183-349 |
| Cow position: | chr13:31487531-31487364 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 116, 27 |
| Conread position: | 187-359 |
| Cow position: | chr13:27932226-27932396 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 115, 27 |
Show alignments to all cow chromosomes.