Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006M14.5 |
| Conread position: | 1-96 |
| Cow position: | chr15:1996646-1996551 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-344 |
| Cow position: | chr15:14472567-14472225 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 93, 195 |
| Conread position: | 1-345 |
| Cow position: | chr15:16896728-16896394 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 49 |
| Conread position: | 1-361 |
| Cow position: | chr15:50744279-50744654 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 164 |
| Conread position: | 1-362 |
| Cow position: | chr15:34401205-34401566 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 69, 214 |
| Conread position: | 2-228 |
| Cow position: | chr15:17697717-17697478 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 3-105 |
| Cow position: | chr15:6173864-6173966 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 100 |
| Conread position: | 5-312 |
| Cow position: | chr15:5123992-5124306 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 19-310 |
| Cow position: | chr15:603861-603556 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 45-349 |
| Cow position: | chr15:12825120-12824817 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 45, 9 |
| Conread position: | 94-276 |
| Cow position: | chr15:38619217-38619035 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 35, 116 |
| Conread position: | 94-308 |
| Cow position: | chr15:15237196-15236987 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 158, 34 |
| Conread position: | 94-345 |
| Cow position: | chr15:52931271-52931014 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 29, 118 |
| Conread position: | 94-361 |
| Cow position: | chr15:18250652-18250392 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 114 |
| Conread position: | 94-366 |
| Cow position: | chr15:1996481-1996197 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 33, 121 |
| Conread position: | 94-367 |
| Cow position: | chr15:13910700-13910422 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 25 |
| Conread position: | 95-360 |
| Cow position: | chr15:16923321-16923050 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 45, 116 |
| Conread position: | 96-363 |
| Cow position: | chr15:22249128-22248856 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 32, 85 |
| Conread position: | 97-370 |
| Cow position: | chr15:28094486-28094756 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 204, 25 |
| Conread position: | 128-345 |
| Cow position: | chr15:3278355-3278139 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 183, 83 |
| Conread position: | 148-363 |
| Cow position: | chr15:51450529-51450751 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 153, 61 |
| Conread position: | 164-318 |
| Cow position: | chr15:12727044-12727197 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 137, 46 |
| Conread position: | 187-359 |
| Cow position: | chr15:29658433-29658251 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 211-349 |
| Cow position: | chr15:17639575-17639715 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 103, 0 |
Show alignments to all cow chromosomes.