Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006M14.5 |
| Conread position: | 1-269 |
| Cow position: | chr2:2667794-2667509 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 73, 226 |
| Conread position: | 1-271 |
| Cow position: | chr2:56299771-56300052 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 173 |
| Conread position: | 1-277 |
| Cow position: | chr2:31079483-31079187 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 66, 228 |
| Conread position: | 1-292 |
| Cow position: | chr2:64662430-64662739 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 222 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 89, 228 |
| Conread position: | 1-311 |
| Cow position: | chr2:47531050-47531376 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 224 |
| Conread position: | 1-312 |
| Cow position: | chr2:39380335-39380026 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 125, 43 |
| Conread position: | 1-358 |
| Cow position: | chr2:47000129-46999748 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 266 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 65, 242 |
| Conread position: | 1-361 |
| Cow position: | chr2:26282354-26282739 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 268 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 97, 229 |
| Conread position: | 1-363 |
| Cow position: | chr2:55498857-55499237 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 259 |
| Conread position: | 2-258 |
| Cow position: | chr2:7309749-7309485 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 76, 216 |
| Conread position: | 21-299 |
| Cow position: | chr2:57318071-57317776 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 207 |
| Conread position: | 53-367 |
| Cow position: | chr2:49000287-49000606 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 89-370 |
| Cow position: | chr2:77519158-77518880 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 33 |
| Conread position: | 94-310 |
| Cow position: | chr2:34585729-34585946 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 94-331 |
| Cow position: | chr2:61865459-61865702 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 29, 118 |
| Conread position: | 94-359 |
| Cow position: | chr2:47127808-47127536 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 29, 115 |
| Conread position: | 94-361 |
| Cow position: | chr2:38839100-38839372 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 73, 95 |
| Conread position: | 94-366 |
| Cow position: | chr2:44344837-44344571 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 12, 50 |
| Conread position: | 94-369 |
| Cow position: | chr2:2482756-2482491 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 90, 118 |
| Conread position: | 96-245 |
| Cow position: | chr2:15343213-15343063 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 96-258 |
| Cow position: | chr2:41362623-41362786 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 96-345 |
| Cow position: | chr2:9581125-9581375 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 32, 114 |
| Conread position: | 96-363 |
| Cow position: | chr2:35900168-35900435 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 77 |
| Conread position: | 97-362 |
| Cow position: | chr2:1481357-1481620 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 31, 58 |
| Conread position: | 98-360 |
| Cow position: | chr2:70183367-70183114 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 108, 74 |
| Conread position: | 122-345 |
| Cow position: | chr2:39758391-39758171 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 179, 9 |
| Conread position: | 128-370 |
| Cow position: | chr2:82140793-82140554 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 140-353 |
| Cow position: | chr2:38902886-38903106 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 148-271 |
| Cow position: | chr2:41437347-41437225 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 153-299 |
| Cow position: | chr2:76045689-76045545 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 164-363 |
| Cow position: | chr2:38168462-38168665 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 178-370 |
| Cow position: | chr2:9696342-9696147 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 133, 42 |
| Conread position: | 179-362 |
| Cow position: | chr2:57647585-57647767 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 48, 30 |
Show alignments to all cow chromosomes.