Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006M14.5 |
| Conread position: | 1-178 |
| Cow position: | chr25:11861981-11862167 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-306 |
| Cow position: | chr25:14548397-14548719 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 92, 228 |
| Conread position: | 1-326 |
| Cow position: | chr25:26098130-26097798 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 89, 214 |
| Conread position: | 1-359 |
| Cow position: | chr25:23567208-23566846 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 100, 63 |
| Conread position: | 1-359 |
| Cow position: | chr25:27375980-27375612 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 129, 215 |
| Conread position: | 1-370 |
| Cow position: | chr25:20480615-20480235 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 53 |
| Conread position: | 3-88 |
| Cow position: | chr25:24491049-24491134 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 75 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-308 |
| Cow position: | chr25:10167784-10168104 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 95, 141 |
| Conread position: | 13-269 |
| Cow position: | chr25:15917309-15917584 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 77, 217 |
| Conread position: | 13-357 |
| Cow position: | chr25:21665083-21664723 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 267 |
| Conread position: | 13-370 |
| Cow position: | chr25:1780909-1781282 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 209 |
| Conread position: | 30-311 |
| Cow position: | chr25:1591442-1591154 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 68, 51 |
| Conread position: | 55-359 |
| Cow position: | chr25:3735830-3735510 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 46, 168 |
| Conread position: | 94-242 |
| Cow position: | chr25:4012475-4012327 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 63, 118 |
| Conread position: | 94-263 |
| Cow position: | chr25:21655332-21655162 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 113 |
| Conread position: | 94-361 |
| Cow position: | chr25:25952249-25951971 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 94-362 |
| Cow position: | chr25:21293438-21293703 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 94-363 |
| Cow position: | chr25:19452678-19452411 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 27, 57 |
| Conread position: | 94-371 |
| Cow position: | chr25:15970615-15970336 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 96-359 |
| Cow position: | chr25:22129728-22129989 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 23 |
| Conread position: | 97-312 |
| Cow position: | chr25:4228947-4228738 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 100-269 |
| Cow position: | chr25:30065890-30065723 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 144-312 |
| Cow position: | chr25:1849399-1849232 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 122, 66 |
| Conread position: | 168-275 |
| Cow position: | chr25:11862362-11862468 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 169-312 |
| Cow position: | chr25:2722473-2722618 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 41 |
Show alignments to all cow chromosomes.