Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8006M14.5
        

               Conread position:
               1-362
               

               Cow position:
               chr27:25448148-25448522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               96, 150
               

               Conread position:
               3-361
               

               Cow position:
               chr27:29642747-29642384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               85, 150
               

               Conread position:
               4-312
               

               Cow position:
               chr27:29667296-29666973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               27, 224
               

               Conread position:
               39-310
               

               Cow position:
               chr27:25166879-25167162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               59, 179
               

               Conread position:
               94-264
               

               Cow position:
               chr27:20339204-20339034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 87
               

               Conread position:
               94-308
               

               Cow position:
               chr27:30484543-30484761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               36, 120
               

               Conread position:
               101-361
               

               Cow position:
               chr27:26466386-26466128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               200, 18
               

               Conread position:
               153-312
               

               Cow position:
               chr27:13298950-13298792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               164-362
               

               Cow position:
               chr27:22532822-22532631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               168-359
               

               Cow position:
               chr27:13309497-13309316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               179-362
               

               Cow position:
               chr27:21120962-21120776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               116, 31
               
Show alignments to all cow chromosomes.