Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006M14.5 |
| Conread position: | 1-216 |
| Cow position: | chr4:28457740-28457503 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-306 |
| Cow position: | chr4:57473518-57473205 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 276 |
| Conread position: | 1-308 |
| Cow position: | chr4:25945396-25945072 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 86, 228 |
| Conread position: | 1-315 |
| Cow position: | chr4:39692460-39692788 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 97, 21 |
| Conread position: | 11-215 |
| Cow position: | chr4:64869096-64868881 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 13-277 |
| Cow position: | chr4:21000832-21001086 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 13-360 |
| Cow position: | chr4:5040068-5039702 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 85, 185 |
| Conread position: | 20-323 |
| Cow position: | chr4:29028013-29027693 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 82, 205 |
| Conread position: | 62-363 |
| Cow position: | chr4:11742454-11742772 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 81-357 |
| Cow position: | chr4:60387982-60387702 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 64, 132 |
| Conread position: | 94-288 |
| Cow position: | chr4:43039639-43039448 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 58 |
| Conread position: | 94-330 |
| Cow position: | chr4:59859603-59859367 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 94-359 |
| Cow position: | chr4:39687126-39686855 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 34, 117 |
| Conread position: | 94-359 |
| Cow position: | chr4:51245634-51245365 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 64, 117 |
| Conread position: | 94-361 |
| Cow position: | chr4:28213642-28213913 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 207, 116 |
| Conread position: | 110-309 |
| Cow position: | chr4:53384376-53384577 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 102 |
| Conread position: | 141-357 |
| Cow position: | chr4:53802664-53802446 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 144-359 |
| Cow position: | chr4:7485232-7485017 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 157, 65 |
| Conread position: | 166-359 |
| Cow position: | chr4:5253364-5253161 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 105, 44 |
| Conread position: | 179-363 |
| Cow position: | chr4:20325443-20325258 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 122, 31 |
Show alignments to all cow chromosomes.