Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006M14.5 |
| Conread position: | 1-256 |
| Cow position: | chr6:41251452-41251719 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 37 |
| Conread position: | 1-277 |
| Cow position: | chr6:20397200-20396911 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 97, 224 |
| Conread position: | 1-345 |
| Cow position: | chr6:9518624-9518988 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 59 |
| Conread position: | 1-352 |
| Cow position: | chr6:32921765-32921405 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 94, 18 |
| Conread position: | 1-362 |
| Cow position: | chr6:47866298-47866668 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 215 |
| Conread position: | 62-257 |
| Cow position: | chr6:52441539-52441739 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 78, 52 |
| Conread position: | 62-370 |
| Cow position: | chr6:52439814-52439505 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 78, 52 |
| Conread position: | 94-201 |
| Cow position: | chr6:44570755-44570862 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-311 |
| Cow position: | chr6:41284304-41284522 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 10, 119 |
| Conread position: | 94-311 |
| Cow position: | chr6:58621721-58621938 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 207, 152 |
| Conread position: | 94-359 |
| Cow position: | chr6:8812741-8813010 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 33, 117 |
| Conread position: | 94-363 |
| Cow position: | chr6:27903854-27904118 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 32, 128 |
| Conread position: | 94-363 |
| Cow position: | chr6:45553445-45553170 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 38, 121 |
| Conread position: | 94-370 |
| Cow position: | chr6:11299039-11298760 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 96-308 |
| Cow position: | chr6:26222830-26222618 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 115 |
| Conread position: | 96-370 |
| Cow position: | chr6:16440485-16440211 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 114 |
| Conread position: | 100-260 |
| Cow position: | chr6:541395-541237 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 58, 110 |
| Conread position: | 100-353 |
| Cow position: | chr6:18405432-18405687 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 28, 87 |
| Conread position: | 111-345 |
| Cow position: | chr6:1566025-1565790 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 16, 101 |
| Conread position: | 117-361 |
| Cow position: | chr6:11073242-11073489 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 172, 92 |
| Conread position: | 132-359 |
| Cow position: | chr6:15594406-15594176 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 169, 77 |
| Conread position: | 133-270 |
| Cow position: | chr6:39768149-39768019 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 136-339 |
| Cow position: | chr6:48777916-48778112 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 134, 59 |
| Conread position: | 148-367 |
| Cow position: | chr6:55022215-55022438 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 154, 73 |
| Conread position: | 166-346 |
| Cow position: | chr6:38415345-38415165 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 148, 44 |
Show alignments to all cow chromosomes.