Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006M14.5 |
| Conread position: | 1-307 |
| Cow position: | chr7:4588203-4588525 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 92, 225 |
| Conread position: | 1-359 |
| Cow position: | chr7:11136958-11137332 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 89, 210 |
| Conread position: | 1-359 |
| Cow position: | chr7:41551045-41551411 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 63, 97 |
| Conread position: | 1-362 |
| Cow position: | chr7:52568097-52568473 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 217 |
| Conread position: | 1-396 |
| Cow position: | chr7:40195019-40194615 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 79, 133 |
| Conread position: | 2-100 |
| Cow position: | chr7:41720275-41720372 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-175 |
| Cow position: | chr7:62016886-62017070 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 2-362 |
| Cow position: | chr7:21937607-21937972 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 221 |
| Conread position: | 3-333 |
| Cow position: | chr7:62048222-62047873 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 221 |
| Conread position: | 4-368 |
| Cow position: | chr7:63967136-63967515 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 218 |
| Conread position: | 20-364 |
| Cow position: | chr7:64151372-64151732 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 202 |
| Conread position: | 45-358 |
| Cow position: | chr7:4257237-4256912 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 163 |
| Conread position: | 62-370 |
| Cow position: | chr7:51338281-51337958 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 93-311 |
| Cow position: | chr7:4242115-4241898 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 35, 45 |
| Conread position: | 94-268 |
| Cow position: | chr7:59666714-59666538 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 31, 117 |
| Conread position: | 94-271 |
| Cow position: | chr7:52398779-52398603 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 94-272 |
| Cow position: | chr7:47943717-47943897 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 40, 117 |
| Conread position: | 94-308 |
| Cow position: | chr7:33434021-33433806 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 117 |
| Conread position: | 94-312 |
| Cow position: | chr7:15674347-15674566 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 32, 117 |
| Conread position: | 95-270 |
| Cow position: | chr7:33600200-33600026 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 96-262 |
| Cow position: | chr7:15434041-15434206 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 98-262 |
| Cow position: | chr7:43568566-43568729 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 29, 113 |
| Conread position: | 127-370 |
| Cow position: | chr7:11847672-11847439 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 147-277 |
| Cow position: | chr7:68949315-68949186 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 113, 63 |
| Conread position: | 148-360 |
| Cow position: | chr7:25967376-25967592 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 153, 57 |
| Conread position: | 166-362 |
| Cow position: | chr7:62017133-62017332 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 134, 44 |
| Conread position: | 167-368 |
| Cow position: | chr7:35030492-35030693 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 135, 43 |
Show alignments to all cow chromosomes.