Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006M14.5 |
| Conread position: | 1-266 |
| Cow position: | chr9:9535669-9535947 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 1-266 |
| Cow position: | chr9:9584551-9584275 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 1-308 |
| Cow position: | chr9:54361215-54360896 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 83, 137 |
| Conread position: | 1-360 |
| Cow position: | chr9:6598888-6599265 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 268 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 97, 10 |
| Conread position: | 7-322 |
| Cow position: | chr9:51888849-51889179 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 241 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 22, 152 |
| Conread position: | 8-312 |
| Cow position: | chr9:34174248-34174561 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 226 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 85, 263 |
| Conread position: | 8-359 |
| Cow position: | chr9:29098065-29097717 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 263, 98 |
| Conread position: | 94-308 |
| Cow position: | chr9:39590389-39590605 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 59 |
| Conread position: | 94-331 |
| Cow position: | chr9:2604362-2604605 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 32, 10 |
| Conread position: | 94-363 |
| Cow position: | chr9:20709393-20709122 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 207, 33 |
| Conread position: | 94-370 |
| Cow position: | chr9:50215421-50215154 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 94-370 |
| Cow position: | chr9:58397196-58397476 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 98-328 |
| Cow position: | chr9:10726576-10726352 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 31, 113 |
| Conread position: | 98-370 |
| Cow position: | chr9:3439897-3439649 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 100-328 |
| Cow position: | chr9:44403687-44403457 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 58, 111 |
| Conread position: | 102-363 |
| Cow position: | chr9:8759913-8760179 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 20 |
| Conread position: | 108-345 |
| Cow position: | chr9:49371249-49371004 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 164-362 |
| Cow position: | chr9:13082544-13082734 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 137, 42 |
| Conread position: | 166-370 |
| Cow position: | chr9:56283770-56283979 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 116, 44 |
Show alignments to all cow chromosomes.