Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006M14.5 |
| Conread position: | 1-278 |
| Cow position: | chrX:35974122-35974417 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 89, 227 |
| Conread position: | 8-312 |
| Cow position: | chrX:26594657-26594977 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 218 |
| Conread position: | 9-310 |
| Cow position: | chrX:21247851-21248167 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 193 |
| Conread position: | 11-370 |
| Cow position: | chrX:25257075-25257430 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 94-267 |
| Cow position: | chrX:31140268-31140097 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 94-276 |
| Cow position: | chrX:44664982-44665165 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 130 |
| Conread position: | 94-277 |
| Cow position: | chrX:25714275-25714459 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 117 |
| Conread position: | 94-359 |
| Cow position: | chrX:18968584-18968848 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 72, 116 |
| Conread position: | 94-360 |
| Cow position: | chrX:19121616-19121351 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 159, 115 |
| Conread position: | 94-361 |
| Cow position: | chrX:26592236-26592505 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 117 |
| Conread position: | 94-366 |
| Cow position: | chrX:113997-114277 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 119 |
| Conread position: | 94-366 |
| Cow position: | chrX:1751393-1751668 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 204, 36 |
| Conread position: | 94-370 |
| Cow position: | chrX:278009-278286 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 116 |
| Conread position: | 94-370 |
| Cow position: | chrX:25950124-25949846 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 74 |
| Conread position: | 111-370 |
| Cow position: | chrX:13592554-13592304 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 130-363 |
| Cow position: | chrX:29917383-29917141 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 171, 57 |
| Conread position: | 148-277 |
| Cow position: | chrX:26130192-26130064 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 123, 20 |
| Conread position: | 153-264 |
| Cow position: | chrX:5889997-5889885 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 187-360 |
| Cow position: | chrX:41754691-41754867 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 114, 27 |
Show alignments to all cow chromosomes.