Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8009A13.3 |
| Conread position: | 390-547 |
| Cow position: | chr1:93587287-93587446 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 390-552 |
| Cow position: | chr1:64595755-64595918 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 10, 120 |
| Conread position: | 391-542 |
| Cow position: | chr1:92416957-92416803 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 391-543 |
| Cow position: | chr1:52410721-52410572 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 119 |
| Conread position: | 391-547 |
| Cow position: | chr1:3635934-3635777 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 132 |
| Conread position: | 391-547 |
| Cow position: | chr1:6821444-6821287 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 391-547 |
| Cow position: | chr1:8329751-8329909 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 391-547 |
| Cow position: | chr1:84893250-84893408 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 391-549 |
| Cow position: | chr1:4534579-4534741 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 158 |
| Conread position: | 391-550 |
| Cow position: | chr1:202908-203069 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 391-553 |
| Cow position: | chr1:87138636-87138473 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 11, 77 |
| Conread position: | 391-554 |
| Cow position: | chr1:85631240-85631405 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 392-543 |
| Cow position: | chr1:63971216-63971064 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 392-547 |
| Cow position: | chr1:42493952-42493802 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 393-551 |
| Cow position: | chr1:96534382-96534540 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 112, 118 |
| Conread position: | 393-554 |
| Cow position: | chr1:30099190-30099037 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 399-506 |
| Cow position: | chr1:71206166-71206059 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 399-547 |
| Cow position: | chr1:7403664-7403518 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 401-543 |
| Cow position: | chr1:54029020-54028878 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 404-542 |
| Cow position: | chr1:102414108-102414240 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
Show alignments to all cow chromosomes.