Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8009A13.3
        

               Conread position:
               391-547
               

               Cow position:
               chr17:9944413-9944571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               391-552
               

               Cow position:
               chr17:25175487-25175325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               11, 155
               

               Conread position:
               391-557
               

               Cow position:
               chr17:36471486-36471654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               10, 92
               

               Conread position:
               393-537
               

               Cow position:
               chr17:6346026-6346172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               7, 55
               

               Conread position:
               393-555
               

               Cow position:
               chr17:40086083-40086242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               30, 70
               

               Conread position:
               399-539
               

               Cow position:
               chr17:24770926-24770791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               399-547
               

               Cow position:
               chr17:25582832-25582684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               425-547
               

               Cow position:
               chr17:36493797-36493675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.