Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8009A13.3 |
| Conread position: | 1-564 |
| Cow position: | chr6:49322424-49321861 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 375-542 |
| Cow position: | chr6:51922120-51921953 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 385-551 |
| Cow position: | chr6:54751445-54751278 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 17, 161 |
| Conread position: | 390-554 |
| Cow position: | chr6:59545126-59544959 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 138 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 391-506 |
| Cow position: | chr6:56449269-56449152 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 391-523 |
| Cow position: | chr6:10573583-10573455 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 391-546 |
| Cow position: | chr6:29756324-29756174 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 11, 98 |
| Conread position: | 391-547 |
| Cow position: | chr6:13957358-13957515 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 391-547 |
| Cow position: | chr6:31757744-31757577 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 391-547 |
| Cow position: | chr6:50483682-50483840 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 391-547 |
| Cow position: | chr6:53441372-53441215 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 391-547 |
| Cow position: | chr6:55556896-55556737 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 391-547 |
| Cow position: | chr6:57308381-57308538 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 11, 123 |
| Conread position: | 391-547 |
| Cow position: | chr6:59615238-59615082 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 391-551 |
| Cow position: | chr6:56838013-56838175 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 391-552 |
| Cow position: | chr6:55735175-55735337 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 11, 153 |
| Conread position: | 392-543 |
| Cow position: | chr6:62938551-62938704 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 9, 135 |
| Conread position: | 398-547 |
| Cow position: | chr6:68858395-68858543 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.