Cow genome map

Conread name: Ss1.1-Pig3-SRG8009F01.3

Conread position: 70-282
Cow position: chr12:8869090-8868881 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 147, 29

Conread position: 84-264
Cow position: chr12:25455916-25456097 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 98

Conread position: 87-279
Cow position: chr12:19715231-19715041 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 127, 21

Conread position: 87-282
Cow position: chr12:23797912-23798099 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 141, 12

Conread position: 88-238
Cow position: chr12:2805239-2805097 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 88-258
Cow position: chr12:32391650-32391820 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 13, 94

Conread position: 88-259
Cow position: chr12:17702424-17702253 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 24

Conread position: 88-260
Cow position: chr12:45814456-45814288 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 12

Conread position: 88-263
Cow position: chr12:5638948-5639124 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 20

Conread position: 88-264
Cow position: chr12:4182886-4182713 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 19

Conread position: 88-264
Cow position: chr12:22047278-22047448 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 20

Conread position: 88-265
Cow position: chr12:40110193-40110361 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 17

Conread position: 88-269
Cow position: chr12:37536684-37536507 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 13

Conread position: 88-270
Cow position: chr12:4116298-4116473 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 134, 20

Conread position: 88-270
Cow position: chr12:11583202-11583374 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 13

Conread position: 88-270
Cow position: chr12:30476286-30476466 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 20

Conread position: 88-270
Cow position: chr12:44622159-44622339 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 121, 13

Conread position: 88-282
Cow position: chr12:41159399-41159588 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 21

Conread position: 88-283
Cow position: chr12:3950542-3950350 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 20

Conread position: 88-286
Cow position: chr12:5800839-5801042 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 13

Conread position: 88-287
Cow position: chr12:27803241-27803050 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 133, 11

Conread position: 88-288
Cow position: chr12:18766172-18765969 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 118, 18

Conread position: 88-289
Cow position: chr12:44596005-44595805 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 131, 20

Conread position: 88-290
Cow position: chr12:731132-730930 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 20

Conread position: 88-290
Cow position: chr12:3510372-3510567 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 182, 20

Conread position: 88-291
Cow position: chr12:3906277-3906480 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 51, 20

Conread position: 88-291
Cow position: chr12:5940152-5940348 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 20

Conread position: 88-291
Cow position: chr12:12178730-12178930 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 17

Conread position: 88-291
Cow position: chr12:18421118-18420915 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 123, 20

Conread position: 88-291
Cow position: chr12:18964122-18963921 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 182, 20

Conread position: 88-291
Cow position: chr12:22881854-22882063 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 26

Conread position: 88-291
Cow position: chr12:23574575-23574770 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 131, 20

Conread position: 88-291
Cow position: chr12:30805659-30805860 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 184, 13

Conread position: 88-291
Cow position: chr12:33851164-33851364 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 129, 11

Conread position: 88-291
Cow position: chr12:42966805-42967002 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 87, 13

Conread position: 88-296
Cow position: chr12:34007108-34007313 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 13

Conread position: 88-309
Cow position: chr12:15162955-15163165 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 20

Conread position: 88-309
Cow position: chr12:27563578-27563351 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 96

Conread position: 88-310
Cow position: chr12:29969385-29969605 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 20

Conread position: 88-310
Cow position: chr12:42879496-42879720 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 95

Conread position: 88-321
Cow position: chr12:6241118-6241357 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 140, 24

Conread position: 88-321
Cow position: chr12:17774600-17774832 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 95

Conread position: 89-261
Cow position: chr12:41214520-41214346 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 80

Conread position: 89-270
Cow position: chr12:1773867-1773681 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 99

Conread position: 89-272
Cow position: chr12:38512042-38511850 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 100

Conread position: 89-274
Cow position: chr12:30438051-30438228 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 89-289
Cow position: chr12:31532600-31532399 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 124, 19

Conread position: 89-291
Cow position: chr12:6410928-6410728 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 164
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 139, 16

Conread position: 89-322
Cow position: chr12:35368447-35368681 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 130, 19

Conread position: 98-265
Cow position: chr12:4122729-4122565 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 61

Conread position: 101-289
Cow position: chr12:8710641-8710826 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 142, 80

Conread position: 101-296
Cow position: chr12:31947933-31948127 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 171, 82

Conread position: 101-320
Cow position: chr12:25320737-25320953 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 119, 80

Conread position: 105-264
Cow position: chr12:20354788-20354954 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 76

Conread position: 105-321
Cow position: chr12:3197095-3197308 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 167, 62

Conread position: 110-269
Cow position: chr12:30578631-30578470 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 75

Conread position: 110-321
Cow position: chr12:41580940-41581148 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 74

Conread position: 112-271
Cow position: chr12:42233882-42234041 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 55

Conread position: 113-248
Cow position: chr12:6226824-6226690 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 70

Conread position: 113-251
Cow position: chr12:7191435-7191297 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 38

Conread position: 113-251
Cow position: chr12:44559415-44559553 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 70

Conread position: 113-257
Cow position: chr12:2670090-2670237 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 69

Conread position: 113-270
Cow position: chr12:4714196-4714346 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 53

Conread position: 113-270
Cow position: chr12:19869296-19869447 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 113-270
Cow position: chr12:24032832-24032989 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 113-270
Cow position: chr12:44846216-44846370 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 113-282
Cow position: chr12:12304218-12304381 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 110, 34

Conread position: 113-285
Cow position: chr12:4768753-4768927 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 97

Conread position: 113-285
Cow position: chr12:30753546-30753721 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 73

Conread position: 113-286
Cow position: chr12:33323668-33323494 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 153, 69

Conread position: 113-287
Cow position: chr12:27365753-27365931 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 96, 68

Conread position: 113-288
Cow position: chr12:29995633-29995460 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 113-288
Cow position: chr12:30662122-30661946 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 68

Conread position: 113-288
Cow position: chr12:31429743-31429567 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 101, 68

Conread position: 113-288
Cow position: chr12:34473797-34473617 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 68

Conread position: 113-288
Cow position: chr12:40910462-40910285 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 108, 68

Conread position: 113-288
Cow position: chr12:47803982-47804161 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 23

Conread position: 113-291
Cow position: chr12:4162540-4162356 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 51

Conread position: 113-291
Cow position: chr12:7000778-7000596 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 147
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 22, 69

Conread position: 113-291
Cow position: chr12:10491099-10491279 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 54

Conread position: 113-291
Cow position: chr12:15122147-15122333 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 44, 70

Conread position: 113-291
Cow position: chr12:18518493-18518680 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 56

Conread position: 113-291
Cow position: chr12:30170495-30170676 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 101, 69

Conread position: 113-291
Cow position: chr12:30210309-30210490 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 106, 68

Conread position: 113-291
Cow position: chr12:44919861-44920042 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 101, 68

Conread position: 113-293
Cow position: chr12:5635620-5635444 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 159, 68

Conread position: 113-295
Cow position: chr12:19691407-19691223 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 111, 67

Conread position: 113-296
Cow position: chr12:17881689-17881873 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 42, 69

Conread position: 114-269
Cow position: chr12:29770745-29770589 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 106, 67

Conread position: 114-282
Cow position: chr12:12031006-12030830 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 114-288
Cow position: chr12:3568773-3568945 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 115, 67

Conread position: 114-288
Cow position: chr12:23916670-23916846 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 68

Conread position: 114-288
Cow position: chr12:33457973-33458151 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 68

Conread position: 114-291
Cow position: chr12:4719773-4719954 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 68

Conread position: 114-291
Cow position: chr12:8943391-8943217 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 62

Conread position: 114-291
Cow position: chr12:9710383-9710201 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 38

Conread position: 114-291
Cow position: chr12:35780095-35779921 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 26

Conread position: 114-291
Cow position: chr12:37993894-37993725 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 148, 39

Conread position: 114-291
Cow position: chr12:38774412-38774236 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 69

Conread position: 115-264
Cow position: chr12:24440647-24440793 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 67

Conread position: 115-264
Cow position: chr12:30227399-30227252 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 55

Conread position: 115-283
Cow position: chr12:20326603-20326765 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 138
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 66, 0

Conread position: 115-287
Cow position: chr12:9914616-9914792 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 69

Conread position: 115-288
Cow position: chr12:33976030-33976203 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 157, 21

Conread position: 115-291
Cow position: chr12:6720152-6720335 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 66

Conread position: 115-291
Cow position: chr12:11836062-11836241 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 105, 49

Conread position: 115-291
Cow position: chr12:17001091-17001265 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 157, 66

Conread position: 115-291
Cow position: chr12:37170114-37169939 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 157, 66

Conread position: 116-282
Cow position: chr12:24211250-24211409 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 20

Conread position: 116-288
Cow position: chr12:7977872-7978041 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 61

Conread position: 116-291
Cow position: chr12:23855665-23855843 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 68

Conread position: 117-219
Cow position: chr12:9413952-9413851 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 64

Conread position: 117-264
Cow position: chr12:28650785-28650935 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 65

Conread position: 117-265
Cow position: chr12:31959724-31959865 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 117-274
Cow position: chr12:6164194-6164035 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 96, 65

Conread position: 117-288
Cow position: chr12:28582673-28582504 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 141
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 105, 65

Conread position: 117-291
Cow position: chr12:5905886-5906063 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 102, 29

Conread position: 117-291
Cow position: chr12:6210326-6210151 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 104, 47

Conread position: 120-310
Cow position: chr12:36790977-36790786 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 61

Conread position: 121-282
Cow position: chr12:20479490-20479337 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 62

Conread position: 121-291
Cow position: chr12:25188022-25188195 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 34

Conread position: 122-261
Cow position: chr12:18021430-18021567 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 60

Conread position: 122-270
Cow position: chr12:9894618-9894766 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 63

Conread position: 122-270
Cow position: chr12:15050782-15050632 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 60

Conread position: 122-287
Cow position: chr12:1030818-1030983 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 41

Conread position: 122-290
Cow position: chr12:28748773-28748948 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 62

Conread position: 122-291
Cow position: chr12:42181302-42181122 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 95, 58

Conread position: 122-291
Cow position: chr12:48415681-48415509 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 14

Conread position: 123-296
Cow position: chr12:5714465-5714642 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 98, 56

Conread position: 124-311
Cow position: chr12:41216046-41215858 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 92, 57

Conread position: 125-288
Cow position: chr12:34161255-34161417 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 56

Conread position: 125-291
Cow position: chr12:15039137-15038969 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 56

Conread position: 125-291
Cow position: chr12:18420309-18420477 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 12, 58

Conread position: 126-283
Cow position: chr12:24107705-24107546 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 86, 54

Conread position: 126-289
Cow position: chr12:24250369-24250208 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 30

Conread position: 127-280
Cow position: chr12:12699924-12699770 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 92, 53

Conread position: 128-291
Cow position: chr12:18943818-18943651 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 56

Conread position: 129-282
Cow position: chr12:12300764-12300909 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 151, 52

Conread position: 130-265
Cow position: chr12:13996177-13996045 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 130-270
Cow position: chr12:27562985-27562844 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 51

Conread position: 130-282
Cow position: chr12:15938422-15938267 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 87, 51

Conread position: 130-288
Cow position: chr12:3623538-3623698 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 51

Conread position: 130-291
Cow position: chr12:4596310-4596471 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 131, 7

Conread position: 130-291
Cow position: chr12:7299617-7299453 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 53

Conread position: 130-310
Cow position: chr12:46120986-46120806 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 135, 52

Conread position: 130-321
Cow position: chr12:35771175-35770983 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 143, 50

Conread position: 135-288
Cow position: chr12:15173674-15173827 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 135, 46

Conread position: 136-269
Cow position: chr12:38184447-38184577 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 119, 46

Conread position: 136-279
Cow position: chr12:42174270-42174412 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 136, 46

Conread position: 136-291
Cow position: chr12:42254517-42254674 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 45

Conread position: 138-282
Cow position: chr12:26217974-26217826 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 43

Conread position: 138-321
Cow position: chr12:19258131-19258314 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 78, 43

Conread position: 142-291
Cow position: chr12:7110056-7110204 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 130, 39

Conread position: 143-296
Cow position: chr12:11587630-11587786 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 79, 44

Conread position: 153-270
Cow position: chr12:30590634-30590748 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 158-291
Cow position: chr12:37137651-37137519 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 26

Conread position: 503-660
Cow position: chr12:38461945-38462102 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 95

Show alignments to all cow chromosomes.