• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8009F01.3
        

               
Conread position:
               
63-270
               

               
Cow position:
               
chr13:39368120-39367926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
70-279
               

               
Cow position:
               
chr13:17158714-17158921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
71-264
               

               
Cow position:
               
chr13:322623-322816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
43, 34
               

               
Conread position:
               
77-291
               

               
Cow position:
               
chr13:21176170-21176382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
143, 9
               

               
Conread position:
               
84-224
               

               
Cow position:
               
chr13:48372772-48372903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
86-270
               

               
Cow position:
               
chr13:10845737-10845559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
87-220
               

               
Cow position:
               
chr13:60690583-60690712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
87-248
               

               
Cow position:
               
chr13:15869264-15869108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
129, 21
               

               
Conread position:
               
87-288
               

               
Cow position:
               
chr13:25434976-25435180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
87-296
               

               
Cow position:
               
chr13:43919117-43919326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 14
               

               
Conread position:
               
88-222
               

               
Cow position:
               
chr13:14544260-14544130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
88-231
               

               
Cow position:
               
chr13:24776421-24776286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
88-237
               

               
Cow position:
               
chr13:21904808-21904659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
88-241
               

               
Cow position:
               
chr13:37516994-37517145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
88-255
               

               
Cow position:
               
chr13:563001-563165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
132, 13
               

               
Conread position:
               
88-264
               

               
Cow position:
               
chr13:20041820-20042001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
88-265
               

               
Cow position:
               
chr13:61170577-61170750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
88-266
               

               
Cow position:
               
chr13:13265949-13265773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
88-268
               

               
Cow position:
               
chr13:32283266-32283093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
136, 20
               

               
Conread position:
               
88-269
               

               
Cow position:
               
chr13:5752282-5752464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-269
               

               
Cow position:
               
chr13:26480071-26480246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
88-269
               

               
Cow position:
               
chr13:60429932-60430114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr13:10988933-10989111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr13:12546768-12546945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr13:43184731-43184912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
137, 13
               

               
Conread position:
               
88-276
               

               
Cow position:
               
chr13:53070028-53070208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
88-279
               

               
Cow position:
               
chr13:25531646-25531838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
88-279
               

               
Cow position:
               
chr13:46736355-46736169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
88-279
               

               
Cow position:
               
chr13:62474661-62474847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
125, 11
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr13:1779975-1779778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr13:43480199-43480006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr13:45023070-45023263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 20
               

               
Conread position:
               
88-283
               

               
Cow position:
               
chr13:57475274-57475470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-284
               

               
Cow position:
               
chr13:19223787-19223595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
190, 20
               

               
Conread position:
               
88-286
               

               
Cow position:
               
chr13:8609409-8609600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
88-287
               

               
Cow position:
               
chr13:15281795-15281996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-287
               

               
Cow position:
               
chr13:49520680-49520878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
169, 20
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr13:8652296-8652499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
126, 50
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr13:21275997-21275802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr13:60974225-60974022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
88-289
               

               
Cow position:
               
chr13:4420489-4420287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
88-289
               

               
Cow position:
               
chr13:15974756-15974560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
88-290
               

               
Cow position:
               
chr13:26261656-26261847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr13:9593650-9593445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr13:13176792-13176590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
132, 13
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr13:15041330-15041533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr13:15195062-15195265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr13:15884875-15885082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 93
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr13:17021587-17021786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr13:18835334-18835144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
152, 13
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr13:19022417-19022211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr13:19188443-19188241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr13:22085599-22085806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr13:23270071-23270265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr13:25926934-25926730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr13:31814013-31813816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr13:34281818-34281618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr13:61976821-61977020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
184, 16
               

               
Conread position:
               
88-293
               

               
Cow position:
               
chr13:52879550-52879354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-295
               

               
Cow position:
               
chr13:9900291-9900094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr13:1042819-1043034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
29, 100
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr13:3315536-3315740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr13:24230354-24230149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr13:49022732-49022933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
132, 13
               

               
Conread position:
               
88-306
               

               
Cow position:
               
chr13:12282976-12282768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
154, 12
               

               
Conread position:
               
88-309
               

               
Cow position:
               
chr13:43762311-43762089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
133, 13
               

               
Conread position:
               
88-310
               

               
Cow position:
               
chr13:8374630-8374851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
88-321
               

               
Cow position:
               
chr13:27525123-27525351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
88-321
               

               
Cow position:
               
chr13:52284951-52284722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
89-246
               

               
Cow position:
               
chr13:4664721-4664878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
89-270
               

               
Cow position:
               
chr13:12682404-12682583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
89-270
               

               
Cow position:
               
chr13:55583342-55583157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
89-278
               

               
Cow position:
               
chr13:41154891-41155080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
131, 11
               

               
Conread position:
               
89-280
               

               
Cow position:
               
chr13:53566740-53566546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
89-282
               

               
Cow position:
               
chr13:16833931-16834123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
89-287
               

               
Cow position:
               
chr13:17622422-17622235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
89-288
               

               
Cow position:
               
chr13:15110461-15110257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
89-288
               

               
Cow position:
               
chr13:46112114-46111908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
89-291
               

               
Cow position:
               
chr13:7076402-7076197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
89-291
               

               
Cow position:
               
chr13:18172479-18172276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
89-291
               

               
Cow position:
               
chr13:20649838-20650046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
89-291
               

               
Cow position:
               
chr13:20679491-20679279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 10
               

               
Conread position:
               
89-291
               

               
Cow position:
               
chr13:42200762-42200559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
130, 76
               

               
Conread position:
               
89-296
               

               
Cow position:
               
chr13:40722562-40722772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
90-291
               

               
Cow position:
               
chr13:37640726-37640529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
95-266
               

               
Cow position:
               
chr13:13809421-13809596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
32, 88
               

               
Conread position:
               
103-279
               

               
Cow position:
               
chr13:43194305-43194130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
111, 72
               

               
Conread position:
               
103-321
               

               
Cow position:
               
chr13:44202124-44201916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
105-270
               

               
Cow position:
               
chr13:49805099-49804938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
112-291
               

               
Cow position:
               
chr13:16024712-16024529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
112-321
               

               
Cow position:
               
chr13:8524500-8524709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
113-248
               

               
Cow position:
               
chr13:36346091-36345956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
113-251
               

               
Cow position:
               
chr13:6975673-6975813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 69
               

               
Conread position:
               
113-257
               

               
Cow position:
               
chr13:37946084-37946230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
113-259
               

               
Cow position:
               
chr13:6389500-6389355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 69
               

               
Conread position:
               
113-262
               

               
Cow position:
               
chr13:55295503-55295652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
98, 68
               

               
Conread position:
               
113-265
               

               
Cow position:
               
chr13:5091545-5091701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
113-269
               

               
Cow position:
               
chr13:2774247-2774095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
113-269
               

               
Cow position:
               
chr13:5758221-5758378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
106, 68
               

               
Conread position:
               
113-269
               

               
Cow position:
               
chr13:47964077-47964226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
113-270
               

               
Cow position:
               
chr13:26743246-26743089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
113-279
               

               
Cow position:
               
chr13:26369646-26369475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
113-280
               

               
Cow position:
               
chr13:45726016-45725850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
113-282
               

               
Cow position:
               
chr13:1569043-1568877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 68
               

               
Conread position:
               
113-282
               

               
Cow position:
               
chr13:48251864-48252023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
113-285
               

               
Cow position:
               
chr13:12207163-12206994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
159, 68
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr13:6079299-6079464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr13:12875852-12876030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
113-287
               

               
Cow position:
               
chr13:2803589-2803416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
113-287
               

               
Cow position:
               
chr13:8201366-8201539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
149, 26
               

               
Conread position:
               
113-287
               

               
Cow position:
               
chr13:17966089-17966264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
106, 68
               

               
Conread position:
               
113-287
               

               
Cow position:
               
chr13:24715364-24715185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr13:11954990-11955172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr13:18166853-18166675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
104, 68
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr13:41253742-41253564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
107, 68
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr13:51940856-51940677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
111, 68
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr13:54094931-54094753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
113-289
               

               
Cow position:
               
chr13:20839683-20839508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
124, 66
               

               
Conread position:
               
113-290
               

               
Cow position:
               
chr13:4552923-4552759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:311550-311378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:6060890-6061068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
114, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:6153662-6153844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:6974283-6974101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:10098871-10099048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
159, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:11061107-11060928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:11321496-11321677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:15528912-15529094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:17292013-17292191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
98, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:17821148-17821330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:18243983-18243802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:19882917-19883097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 14
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:21039478-21039659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:23960693-23960862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:28552716-28552528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:29831313-29831491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:47186344-47186178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:51115908-51116084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
110, 55
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:55674089-55674268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
159, 68
               

               
Conread position:
               
113-292
               

               
Cow position:
               
chr13:59687761-59687940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
152, 68
               

               
Conread position:
               
113-300
               

               
Cow position:
               
chr13:37484154-37484348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
111, 69
               

               
Conread position:
               
113-312
               

               
Cow position:
               
chr13:11591866-11591672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
113-321
               

               
Cow position:
               
chr13:20706086-20706298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 64
               

               
Conread position:
               
113-322
               

               
Cow position:
               
chr13:17970908-17971121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
114-215
               

               
Cow position:
               
chr13:4514580-4514479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
114-268
               

               
Cow position:
               
chr13:19178395-19178237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
114-269
               

               
Cow position:
               
chr13:25381081-25380927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
114-279
               

               
Cow position:
               
chr13:52749359-52749518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
114-286
               

               
Cow position:
               
chr13:18058127-18058305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
114-288
               

               
Cow position:
               
chr13:50713321-50713153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr13:890053-890229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
95, 66
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr13:1363813-1363634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr13:13338979-13338796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr13:13954269-13954453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr13:14576325-14576153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 65
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr13:15991108-15991290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr13:17613465-17613280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr13:18995247-18995066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr13:24369699-24369521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 52
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr13:34263250-34263430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr13:36771300-36771482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr13:41806894-41806712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
114-296
               

               
Cow position:
               
chr13:7663305-7663487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 68
               

               
Conread position:
               
114-300
               

               
Cow position:
               
chr13:15194613-15194804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 66
               

               
Conread position:
               
114-310
               

               
Cow position:
               
chr13:17439651-17439847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
106, 67
               

               
Conread position:
               
114-321
               

               
Cow position:
               
chr13:2414149-2413939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
114-321
               

               
Cow position:
               
chr13:14771576-14771361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
115-253
               

               
Cow position:
               
chr13:54237470-54237333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
115-259
               

               
Cow position:
               
chr13:52199204-52199060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
98, 66
               

               
Conread position:
               
115-268
               

               
Cow position:
               
chr13:47313037-47312882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 53
               

               
Conread position:
               
115-282
               

               
Cow position:
               
chr13:61990218-61990382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
115-287
               

               
Cow position:
               
chr13:9643768-9643943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
115-288
               

               
Cow position:
               
chr13:24753999-24753830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
115-288
               

               
Cow position:
               
chr13:28683480-28683305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
115-288
               

               
Cow position:
               
chr13:37381924-37381744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
115-290
               

               
Cow position:
               
chr13:17568981-17569160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr13:21135782-21135961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr13:34261352-34261171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr13:55316071-55316251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
116-245
               

               
Cow position:
               
chr13:55947891-55947761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
116-262
               

               
Cow position:
               
chr13:1231764-1231617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 65
               

               
Conread position:
               
116-270
               

               
Cow position:
               
chr13:57002845-57002689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
116-287
               

               
Cow position:
               
chr13:12448875-12449044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
118-280
               

               
Cow position:
               
chr13:21155376-21155541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
7, 65
               

               
Conread position:
               
118-280
               

               
Cow position:
               
chr13:51901703-51901539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
118-286
               

               
Cow position:
               
chr13:46181906-46181740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
118-294
               

               
Cow position:
               
chr13:6455486-6455312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
122-264
               

               
Cow position:
               
chr13:54093856-54093714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
122-286
               

               
Cow position:
               
chr13:47322293-47322462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
122-291
               

               
Cow position:
               
chr13:15192779-15192946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
122-291
               

               
Cow position:
               
chr13:54388908-54389081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 59
               

               
Conread position:
               
123-286
               

               
Cow position:
               
chr13:14967105-14967273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
124-282
               

               
Cow position:
               
chr13:20880817-20880981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
124-282
               

               
Cow position:
               
chr13:32826347-32826509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 57
               

               
Conread position:
               
124-283
               

               
Cow position:
               
chr13:13765893-13765734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
126-335
               

               
Cow position:
               
chr13:55728006-55727798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
139, 13
               

               
Conread position:
               
127-309
               

               
Cow position:
               
chr13:3989308-3989119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
129-291
               

               
Cow position:
               
chr13:15659378-15659219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
147, 8
               

               
Conread position:
               
129-318
               

               
Cow position:
               
chr13:25695667-25695856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 54
               

               
Conread position:
               
130-268
               

               
Cow position:
               
chr13:16038191-16038321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
130-275
               

               
Cow position:
               
chr13:61162748-61162601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 51
               

               
Conread position:
               
130-288
               

               
Cow position:
               
chr13:15621916-15621753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
87, 7
               

               
Conread position:
               
130-288
               

               
Cow position:
               
chr13:18929630-18929469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
130-296
               

               
Cow position:
               
chr13:46329501-46329671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
84, 51
               

               
Conread position:
               
135-282
               

               
Cow position:
               
chr13:49796116-49795976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
135-288
               

               
Cow position:
               
chr13:9974978-9975131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 45
               

               
Conread position:
               
136-269
               

               
Cow position:
               
chr13:16711723-16711591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
136-288
               

               
Cow position:
               
chr13:2463136-2463292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr13:37592846-37593006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
137-279
               

               
Cow position:
               
chr13:30026208-30026063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
139-268
               

               
Cow position:
               
chr13:16014903-16014778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
139-291
               

               
Cow position:
               
chr13:2192804-2192651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 42
               

               
Conread position:
               
140-288
               

               
Cow position:
               
chr13:60389399-60389545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
132, 70
               

               
Conread position:
               
141-278
               

               
Cow position:
               
chr13:20137916-20137778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
142-291
               

               
Cow position:
               
chr13:16187807-16187956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
134, 7
               

               
Conread position:
               
143-279
               

               
Cow position:
               
chr13:15964408-15964265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
150-291
               

               
Cow position:
               
chr13:10040452-10040600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
151-321
               

               
Cow position:
               
chr13:17563816-17563648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 6
               

               
Conread position:
               
155-291
               

               
Cow position:
               
chr13:38872874-38873004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
175-291
               

               
Cow position:
               
chr13:12925831-12925719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
483-660
               

               
Cow position:
               
chr13:10337594-10337416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
17, 77
               
Show alignments to all cow chromosomes.