Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8009F01.3 |
| Conread position: | 64-287 |
| Cow position: | chr14:33828389-33828163 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 45, 120 |
| Conread position: | 84-291 |
| Cow position: | chr14:10078469-10078265 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 129, 8 |
| Conread position: | 84-294 |
| Cow position: | chr14:36289591-36289803 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 95 |
| Conread position: | 87-287 |
| Cow position: | chr14:25779291-25779103 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 130, 13 |
| Conread position: | 87-291 |
| Cow position: | chr14:20110523-20110725 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 132, 30 |
| Conread position: | 88-237 |
| Cow position: | chr14:19624290-19624139 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 96 |
| Conread position: | 88-247 |
| Cow position: | chr14:10702634-10702791 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 88-248 |
| Cow position: | chr14:23464618-23464774 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 88-251 |
| Cow position: | chr14:13810137-13809973 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 12 |
| Conread position: | 88-264 |
| Cow position: | chr14:23712886-23712714 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 129, 13 |
| Conread position: | 88-264 |
| Cow position: | chr14:24581126-24580954 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 132, 94 |
| Conread position: | 88-264 |
| Cow position: | chr14:27312625-27312449 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 88-267 |
| Cow position: | chr14:34355495-34355671 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 88-270 |
| Cow position: | chr14:8101988-8101810 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 129, 12 |
| Conread position: | 88-270 |
| Cow position: | chr14:11819924-11820100 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 88-270 |
| Cow position: | chr14:28304590-28304763 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 88-272 |
| Cow position: | chr14:19394559-19394379 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 88-280 |
| Cow position: | chr14:1802916-1803103 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 20 |
| Conread position: | 88-287 |
| Cow position: | chr14:34199645-34199842 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 29, 95 |
| Conread position: | 88-287 |
| Cow position: | chr14:46685499-46685304 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 88-288 |
| Cow position: | chr14:10858631-10858433 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 88-288 |
| Cow position: | chr14:14621975-14622176 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 88-288 |
| Cow position: | chr14:17841090-17841292 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 118, 20 |
| Conread position: | 88-288 |
| Cow position: | chr14:19618553-19618751 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 131, 20 |
| Conread position: | 88-288 |
| Cow position: | chr14:20712488-20712691 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 88-288 |
| Cow position: | chr14:23762078-23761871 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 88-288 |
| Cow position: | chr14:45605290-45605094 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 136, 12 |
| Conread position: | 88-288 |
| Cow position: | chr14:47672686-47672881 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 69, 12 |
| Conread position: | 88-289 |
| Cow position: | chr14:24237024-24236824 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 88-290 |
| Cow position: | chr14:24796228-24796435 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 20 |
| Conread position: | 88-291 |
| Cow position: | chr14:16834534-16834319 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 20 |
| Conread position: | 88-291 |
| Cow position: | chr14:19863230-19863436 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 88-291 |
| Cow position: | chr14:28114987-28115190 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 166 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 133, 20 |
| Conread position: | 88-291 |
| Cow position: | chr14:33247234-33247432 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 88-291 |
| Cow position: | chr14:35420562-35420767 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 88-291 |
| Cow position: | chr14:38143913-38144110 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 182, 13 |
| Conread position: | 88-291 |
| Cow position: | chr14:41211052-41210851 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 142, 20 |
| Conread position: | 88-291 |
| Cow position: | chr14:41479461-41479665 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 88-291 |
| Cow position: | chr14:49021699-49021902 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 88-296 |
| Cow position: | chr14:41180496-41180720 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 9 |
| Conread position: | 89-212 |
| Cow position: | chr14:15913346-15913469 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 95 |
| Conread position: | 89-216 |
| Cow position: | chr14:4227002-4227130 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 94 |
| Conread position: | 89-249 |
| Cow position: | chr14:10721531-10721687 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 89-257 |
| Cow position: | chr14:21964325-21964154 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 98 |
| Conread position: | 89-265 |
| Cow position: | chr14:25231444-25231625 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 128, 92 |
| Conread position: | 89-270 |
| Cow position: | chr14:41128094-41127917 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 89-280 |
| Cow position: | chr14:41966438-41966254 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 89-288 |
| Cow position: | chr14:3564473-3564284 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 181, 12 |
| Conread position: | 89-288 |
| Cow position: | chr14:25403739-25403935 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 131, 15 |
| Conread position: | 89-289 |
| Cow position: | chr14:33714485-33714679 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 127, 12 |
| Conread position: | 89-291 |
| Cow position: | chr14:13006706-13006501 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 89-291 |
| Cow position: | chr14:22966957-22966752 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 6, 97 |
| Conread position: | 89-296 |
| Cow position: | chr14:42596581-42596375 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 62, 92 |
| Conread position: | 100-269 |
| Cow position: | chr14:1859425-1859592 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 101-280 |
| Cow position: | chr14:7959960-7959788 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 101-283 |
| Cow position: | chr14:24981646-24981460 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 108-313 |
| Cow position: | chr14:23424439-23424235 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 157, 73 |
| Conread position: | 108-313 |
| Cow position: | chr14:23443200-23442996 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 157, 73 |
| Conread position: | 110-269 |
| Cow position: | chr14:48740691-48740848 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 112-227 |
| Cow position: | chr14:12613915-12614030 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 68 |
| Conread position: | 112-287 |
| Cow position: | chr14:29592545-29592725 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 25, 68 |
| Conread position: | 113-214 |
| Cow position: | chr14:12484124-12484223 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 113-231 |
| Cow position: | chr14:22952816-22952933 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 113-236 |
| Cow position: | chr14:50518797-50518918 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 113-255 |
| Cow position: | chr14:19513242-19513378 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 103, 24 |
| Conread position: | 113-260 |
| Cow position: | chr14:6419131-6419272 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 113-261 |
| Cow position: | chr14:39422413-39422564 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 113-261 |
| Cow position: | chr14:40346984-40347132 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 108, 68 |
| Conread position: | 113-263 |
| Cow position: | chr14:5836078-5835933 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 104, 55 |
| Conread position: | 113-264 |
| Cow position: | chr14:24786117-24785971 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 113-268 |
| Cow position: | chr14:38747843-38747693 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 27 |
| Conread position: | 113-270 |
| Cow position: | chr14:8964717-8964568 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 104, 54 |
| Conread position: | 113-270 |
| Cow position: | chr14:14466301-14466443 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 113-270 |
| Cow position: | chr14:20932792-20932634 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 113-270 |
| Cow position: | chr14:33830474-33830321 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 113-276 |
| Cow position: | chr14:44234008-44234166 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 55 |
| Conread position: | 113-277 |
| Cow position: | chr14:445589-445419 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 113-278 |
| Cow position: | chr14:18657426-18657597 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 21, 69 |
| Conread position: | 113-282 |
| Cow position: | chr14:4877054-4877225 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 113-282 |
| Cow position: | chr14:8786374-8786544 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 113-282 |
| Cow position: | chr14:30662164-30661997 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 113-282 |
| Cow position: | chr14:35498324-35498499 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 6, 74 |
| Conread position: | 113-282 |
| Cow position: | chr14:48412703-48412876 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 104, 68 |
| Conread position: | 113-285 |
| Cow position: | chr14:6735683-6735862 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 51 |
| Conread position: | 113-288 |
| Cow position: | chr14:5630338-5630162 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 159, 69 |
| Conread position: | 113-288 |
| Cow position: | chr14:37884236-37884410 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 159, 68 |
| Conread position: | 113-288 |
| Cow position: | chr14:40433097-40432925 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 159, 68 |
| Conread position: | 113-288 |
| Cow position: | chr14:43046325-43046155 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 113-288 |
| Cow position: | chr14:44084302-44084489 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 113-289 |
| Cow position: | chr14:33643605-33643777 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 113-290 |
| Cow position: | chr14:36167115-36166936 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 85, 45 |
| Conread position: | 113-291 |
| Cow position: | chr14:4202916-4203101 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 19, 70 |
| Conread position: | 113-291 |
| Cow position: | chr14:14187512-14187329 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 24, 8 |
| Conread position: | 113-291 |
| Cow position: | chr14:16549827-16550006 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 106, 69 |
| Conread position: | 113-291 |
| Cow position: | chr14:19372518-19372336 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 113-291 |
| Cow position: | chr14:21933164-21933346 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 107, 69 |
| Conread position: | 113-291 |
| Cow position: | chr14:24608143-24607964 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 101, 68 |
| Conread position: | 113-291 |
| Cow position: | chr14:34984040-34983867 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 148, 68 |
| Conread position: | 113-291 |
| Cow position: | chr14:35018578-35018756 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 107, 68 |
| Conread position: | 113-291 |
| Cow position: | chr14:37131832-37131650 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 101, 68 |
| Conread position: | 113-291 |
| Cow position: | chr14:37447292-37447466 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 113-291 |
| Cow position: | chr14:46654368-46654545 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 106, 29 |
| Conread position: | 113-295 |
| Cow position: | chr14:40165599-40165417 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 104, 17 |
| Conread position: | 113-302 |
| Cow position: | chr14:6175760-6175570 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 23, 67 |
| Conread position: | 113-308 |
| Cow position: | chr14:27591777-27591977 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 24 |
| Conread position: | 113-309 |
| Cow position: | chr14:33338303-33338497 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 104, 28 |
| Conread position: | 114-247 |
| Cow position: | chr14:12250019-12250153 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 114-256 |
| Cow position: | chr14:38673455-38673598 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 94, 67 |
| Conread position: | 114-262 |
| Cow position: | chr14:15518202-15518348 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 69 |
| Conread position: | 114-263 |
| Cow position: | chr14:16033184-16033032 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 103, 69 |
| Conread position: | 114-285 |
| Cow position: | chr14:27919561-27919736 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 15, 68 |
| Conread position: | 114-287 |
| Cow position: | chr14:8541034-8541211 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 73 |
| Conread position: | 114-287 |
| Cow position: | chr14:14949034-14949212 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 114-288 |
| Cow position: | chr14:11846674-11846495 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 114-291 |
| Cow position: | chr14:20010133-20010314 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 103, 67 |
| Conread position: | 114-291 |
| Cow position: | chr14:36554979-36555154 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 114-291 |
| Cow position: | chr14:40329620-40329441 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 114-291 |
| Cow position: | chr14:42154788-42154975 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 103, 67 |
| Conread position: | 114-291 |
| Cow position: | chr14:44742206-44742384 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 114-302 |
| Cow position: | chr14:33341934-33341740 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 69 |
| Conread position: | 114-310 |
| Cow position: | chr14:20640451-20640651 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 106, 67 |
| Conread position: | 115-215 |
| Cow position: | chr14:28924561-28924462 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 67 |
| Conread position: | 115-264 |
| Cow position: | chr14:19222057-19221904 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 68 |
| Conread position: | 115-264 |
| Cow position: | chr14:24991998-24991848 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 115-268 |
| Cow position: | chr14:33791361-33791210 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 115-268 |
| Cow position: | chr14:38379196-38379044 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 66 |
| Conread position: | 115-287 |
| Cow position: | chr14:19129686-19129507 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 115-291 |
| Cow position: | chr14:50027397-50027221 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 69 |
| Conread position: | 115-309 |
| Cow position: | chr14:20384808-20385007 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 116-270 |
| Cow position: | chr14:24387622-24387467 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 101, 65 |
| Conread position: | 117-248 |
| Cow position: | chr14:37467588-37467720 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 16, 65 |
| Conread position: | 117-270 |
| Cow position: | chr14:7482228-7482076 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 80, 64 |
| Conread position: | 117-287 |
| Cow position: | chr14:47027196-47027371 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 97, 64 |
| Conread position: | 117-291 |
| Cow position: | chr14:23080591-23080767 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 96, 64 |
| Conread position: | 120-270 |
| Cow position: | chr14:20483287-20483437 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 5, 62 |
| Conread position: | 121-286 |
| Cow position: | chr14:14317052-14316889 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 121-286 |
| Cow position: | chr14:33309338-33309501 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 121-287 |
| Cow position: | chr14:41471799-41471968 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 122-289 |
| Cow position: | chr14:20600554-20600386 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 125-288 |
| Cow position: | chr14:35503528-35503362 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 94, 11 |
| Conread position: | 129-291 |
| Cow position: | chr14:41302670-41302833 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 55 |
| Conread position: | 129-310 |
| Cow position: | chr14:45718105-45718287 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 146, 52 |
| Conread position: | 130-282 |
| Cow position: | chr14:22941562-22941722 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 51 |
| Conread position: | 130-286 |
| Cow position: | chr14:37883758-37883914 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 89, 39 |
| Conread position: | 130-288 |
| Cow position: | chr14:42437184-42437025 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 89, 9 |
| Conread position: | 130-291 |
| Cow position: | chr14:21284783-21284625 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 83, 52 |
| Conread position: | 130-296 |
| Cow position: | chr14:40754085-40754255 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 67, 8 |
| Conread position: | 130-321 |
| Cow position: | chr14:21535161-21535340 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 39, 52 |
| Conread position: | 131-287 |
| Cow position: | chr14:19851774-19851933 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 49 |
| Conread position: | 131-288 |
| Cow position: | chr14:37422628-37422787 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 131-309 |
| Cow position: | chr14:19951728-19951544 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 50 |
| Conread position: | 136-287 |
| Cow position: | chr14:6226473-6226624 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 136, 46 |
| Conread position: | 137-285 |
| Cow position: | chr14:41756412-41756267 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 138, 44 |
| Conread position: | 137-291 |
| Cow position: | chr14:1868231-1868386 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 135, 73 |
| Conread position: | 137-309 |
| Cow position: | chr14:12244229-12244407 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 44 |
| Conread position: | 138-288 |
| Cow position: | chr14:12954231-12954385 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 138-291 |
| Cow position: | chr14:6541572-6541727 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 83, 43 |
| Conread position: | 138-291 |
| Cow position: | chr14:7036203-7036360 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 43 |
| Conread position: | 138-291 |
| Cow position: | chr14:18763293-18763441 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 127, 24 |
| Conread position: | 139-270 |
| Cow position: | chr14:4044826-4044698 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 142-269 |
| Cow position: | chr14:16761425-16761548 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 35 |
| Conread position: | 142-282 |
| Cow position: | chr14:1977923-1978064 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 40 |
| Conread position: | 168-291 |
| Cow position: | chr14:1796312-1796188 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 473-645 |
| Cow position: | chr14:22903740-22903912 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 10 |
Show alignments to all cow chromosomes.