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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8009F01.3
        

               
Conread position:
               
70-288
               

               
Cow position:
               
chr15:18018189-18017976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
81-291
               

               
Cow position:
               
chr15:225550-225760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
82-268
               

               
Cow position:
               
chr15:35642273-35642089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
82-288
               

               
Cow position:
               
chr15:21582666-21582877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
84-291
               

               
Cow position:
               
chr15:8354293-8354085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
127, 24
               

               
Conread position:
               
84-296
               

               
Cow position:
               
chr15:2141046-2141264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr15:22531904-22531717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
194, 15
               

               
Conread position:
               
87-251
               

               
Cow position:
               
chr15:38162254-38162095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
87-265
               

               
Cow position:
               
chr15:5498782-5498962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
87-270
               

               
Cow position:
               
chr15:11646241-11646425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
87-288
               

               
Cow position:
               
chr15:9970726-9970931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 94
               

               
Conread position:
               
87-291
               

               
Cow position:
               
chr15:35417372-35417581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
62, 101
               

               
Conread position:
               
88-248
               

               
Cow position:
               
chr15:21523033-21522875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
88-264
               

               
Cow position:
               
chr15:23927224-23927401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
88-264
               

               
Cow position:
               
chr15:34144909-34145081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-265
               

               
Cow position:
               
chr15:10845968-10845791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
88-268
               

               
Cow position:
               
chr15:40009404-40009585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
134, 20
               

               
Conread position:
               
88-269
               

               
Cow position:
               
chr15:40798183-40798359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr15:608392-608213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr15:15707865-15708047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
124, 20
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr15:16936592-16936781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr15:32323959-32324141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr15:41619941-41620124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
88-279
               

               
Cow position:
               
chr15:39599688-39599499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
177, 11
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr15:9871168-9871364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
134, 20
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr15:16657739-16657545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr15:21388922-21389114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr15:22136928-22136740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
88-286
               

               
Cow position:
               
chr15:17100464-17100657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr15:1329857-1330056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr15:20459054-20459261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
88-289
               

               
Cow position:
               
chr15:16307658-16307468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
184, 20
               

               
Conread position:
               
88-289
               

               
Cow position:
               
chr15:22532483-22532298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
88-290
               

               
Cow position:
               
chr15:21908181-21907980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
131, 11
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr15:1804086-1804291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr15:5234758-5234953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
139, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr15:12655666-12655872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
131, 85
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr15:16112647-16112444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr15:16667257-16667459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr15:18671202-18671412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr15:19186373-19186574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr15:19403227-19403041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr15:23768017-23768213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr15:24044849-24045056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr15:24941130-24941327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr15:29331249-29331050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr15:38877061-38877260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr15:40999823-41000026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
134, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr15:50302429-50302226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr15:1297983-1297778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr15:27972969-27973178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
88-297
               

               
Cow position:
               
chr15:36782082-36782287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
177, 11
               

               
Conread position:
               
88-300
               

               
Cow position:
               
chr15:11995780-11995992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-310
               

               
Cow position:
               
chr15:33306358-33306135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 92
               

               
Conread position:
               
88-313
               

               
Cow position:
               
chr15:29604470-29604679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
183, 13
               

               
Conread position:
               
88-321
               

               
Cow position:
               
chr15:43626712-43626482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
88-340
               

               
Cow position:
               
chr15:11559111-11559360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
89-270
               

               
Cow position:
               
chr15:20725367-20725549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 97
               

               
Conread position:
               
89-279
               

               
Cow position:
               
chr15:5536005-5535811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
89-287
               

               
Cow position:
               
chr15:19119359-19119563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
89-287
               

               
Cow position:
               
chr15:45323035-45322829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
89-288
               

               
Cow position:
               
chr15:35945771-35945576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
183, 10
               

               
Conread position:
               
89-289
               

               
Cow position:
               
chr15:10737498-10737698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
89-291
               

               
Cow position:
               
chr15:20370208-20370411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
89-291
               

               
Cow position:
               
chr15:50322840-50322638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
89-302
               

               
Cow position:
               
chr15:4535158-4534941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
90-300
               

               
Cow position:
               
chr15:36621664-36621443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
91-247
               

               
Cow position:
               
chr15:53402749-53402901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
99-285
               

               
Cow position:
               
chr15:2380597-2380406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
100-288
               

               
Cow position:
               
chr15:29810351-29810170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
101-272
               

               
Cow position:
               
chr15:10245770-10245932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
102-255
               

               
Cow position:
               
chr15:51632805-51632955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 6
               

               
Conread position:
               
109-321
               

               
Cow position:
               
chr15:39326284-39326504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
110-291
               

               
Cow position:
               
chr15:30047316-30047502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
102, 71
               

               
Conread position:
               
112-288
               

               
Cow position:
               
chr15:22939100-22939278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
110, 69
               

               
Conread position:
               
113-220
               

               
Cow position:
               
chr15:41583134-41583029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
113-251
               

               
Cow position:
               
chr15:16640004-16639872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
113-265
               

               
Cow position:
               
chr15:13684043-13684196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 73
               

               
Conread position:
               
113-268
               

               
Cow position:
               
chr15:35112654-35112814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
113-269
               

               
Cow position:
               
chr15:286702-286546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
113-270
               

               
Cow position:
               
chr15:14856244-14856400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
113-271
               

               
Cow position:
               
chr15:23702998-23702845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
113-276
               

               
Cow position:
               
chr15:36773474-36773637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
113-282
               

               
Cow position:
               
chr15:4138357-4138185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
113-283
               

               
Cow position:
               
chr15:49274175-49274006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
154, 68
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr15:4418177-4418351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr15:6462273-6462448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr15:26903420-26903238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
104, 68
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr15:39598466-39598294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
113-287
               

               
Cow position:
               
chr15:13387303-13387125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
113-287
               

               
Cow position:
               
chr15:37205268-37205096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
152, 68
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr15:794793-794974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr15:10608082-10608259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
103, 70
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr15:16583482-16583645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr15:16604046-16603872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr15:22938546-22938715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr15:44641120-44640943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr15:9107260-9107078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
19, 69
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr15:9648481-9648663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr15:12870640-12870820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr15:13515592-13515410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
106, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr15:17859014-17859182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr15:20352053-20351876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
165, 27
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr15:21803447-21803613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr15:26911855-26912028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr15:26919054-26919231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
159, 24
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr15:27281092-27280915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr15:34206965-34207143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr15:36259379-36259560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 70
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr15:36353892-36353712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
113-295
               

               
Cow position:
               
chr15:22553319-22553501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
113-295
               

               
Cow position:
               
chr15:38883376-38883189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
113-296
               

               
Cow position:
               
chr15:12304865-12304677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
111, 68
               

               
Conread position:
               
113-296
               

               
Cow position:
               
chr15:13554578-13554392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
113-296
               

               
Cow position:
               
chr15:22871830-22871652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
113-296
               

               
Cow position:
               
chr15:42143080-42142898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
113-310
               

               
Cow position:
               
chr15:6970206-6970012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
108, 53
               

               
Conread position:
               
113-316
               

               
Cow position:
               
chr15:17337582-17337378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 68
               

               
Conread position:
               
113-320
               

               
Cow position:
               
chr15:42788927-42789136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
114-248
               

               
Cow position:
               
chr15:11362955-11363087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
114-261
               

               
Cow position:
               
chr15:7430200-7430054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
114-264
               

               
Cow position:
               
chr15:1857950-1857797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
114-270
               

               
Cow position:
               
chr15:12723310-12723159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
114-282
               

               
Cow position:
               
chr15:42415481-42415311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
114-286
               

               
Cow position:
               
chr15:5571413-5571580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
114-287
               

               
Cow position:
               
chr15:21894004-21893827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
111, 67
               

               
Conread position:
               
114-288
               

               
Cow position:
               
chr15:43599408-43599236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
110, 28
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr15:10512048-10512228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 56
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr15:11560289-11560471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr15:19771356-19771180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr15:23115065-23114878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr15:47279917-47280095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
114-293
               

               
Cow position:
               
chr15:51427600-51427784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
114-295
               

               
Cow position:
               
chr15:8007204-8007020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
114-309
               

               
Cow position:
               
chr15:39405954-39405769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
115-264
               

               
Cow position:
               
chr15:29792690-29792832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
115-282
               

               
Cow position:
               
chr15:4178715-4178891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr15:31857810-31857635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
154, 66
               

               
Conread position:
               
115-293
               

               
Cow position:
               
chr15:1083154-1083334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
102, 65
               

               
Conread position:
               
116-291
               

               
Cow position:
               
chr15:10231521-10231706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
117-291
               

               
Cow position:
               
chr15:5726544-5726369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
117-291
               

               
Cow position:
               
chr15:30470750-30470928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
118-280
               

               
Cow position:
               
chr15:53036748-53036916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
7, 64
               

               
Conread position:
               
118-291
               

               
Cow position:
               
chr15:20422558-20422734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
122-263
               

               
Cow position:
               
chr15:36724965-36725104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
122-284
               

               
Cow position:
               
chr15:26573593-26573434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
122-286
               

               
Cow position:
               
chr15:5930107-5929947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
122-287
               

               
Cow position:
               
chr15:51898445-51898276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
122-288
               

               
Cow position:
               
chr15:662254-662421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
122-290
               

               
Cow position:
               
chr15:23696696-23696866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
122-291
               

               
Cow position:
               
chr15:4295979-4295807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
122-291
               

               
Cow position:
               
chr15:9781681-9781515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
125-287
               

               
Cow position:
               
chr15:21421150-21420986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
94, 56
               

               
Conread position:
               
126-288
               

               
Cow position:
               
chr15:6232806-6232967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
126-309
               

               
Cow position:
               
chr15:46563282-46563459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
139, 40
               

               
Conread position:
               
129-291
               

               
Cow position:
               
chr15:5717917-5717754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
130-262
               

               
Cow position:
               
chr15:32287551-32287679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
130-278
               

               
Cow position:
               
chr15:12785630-12785488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
130-279
               

               
Cow position:
               
chr15:37381827-37381680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
135, 9
               

               
Conread position:
               
130-288
               

               
Cow position:
               
chr15:5158581-5158421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
130-310
               

               
Cow position:
               
chr15:16927891-16928069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
135, 39
               

               
Conread position:
               
130-323
               

               
Cow position:
               
chr15:16448892-16448694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
131-282
               

               
Cow position:
               
chr15:6657302-6657150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
131-321
               

               
Cow position:
               
chr15:23572480-23572673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
132-270
               

               
Cow position:
               
chr15:12359240-12359105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
136-269
               

               
Cow position:
               
chr15:43673737-43673866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
136-287
               

               
Cow position:
               
chr15:31928698-31928848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
116, 46
               

               
Conread position:
               
136-309
               

               
Cow position:
               
chr15:24797611-24797785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
133, 45
               

               
Conread position:
               
137-257
               

               
Cow position:
               
chr15:13846392-13846509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
137-268
               

               
Cow position:
               
chr15:35204949-35205077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
137-296
               

               
Cow position:
               
chr15:23779872-23780032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
128, 45
               

               
Conread position:
               
138-261
               

               
Cow position:
               
chr15:29861523-29861398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
138-286
               

               
Cow position:
               
chr15:34284213-34284361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
139-288
               

               
Cow position:
               
chr15:5683338-5683192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 42
               

               
Conread position:
               
142-278
               

               
Cow position:
               
chr15:43788446-43788313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
142-288
               

               
Cow position:
               
chr15:10660357-10660508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
142-291
               

               
Cow position:
               
chr15:47843054-47843207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
144-283
               

               
Cow position:
               
chr15:5632875-5632741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
145-288
               

               
Cow position:
               
chr15:35440884-35441031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
156-310
               

               
Cow position:
               
chr15:39286232-39286384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
160-291
               

               
Cow position:
               
chr15:5727829-5727694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
161-291
               

               
Cow position:
               
chr15:41527802-41527928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
171-291
               

               
Cow position:
               
chr15:14176334-14176455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
472-648
               

               
Cow position:
               
chr15:35592857-35593027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
30, 122
               
Show alignments to all cow chromosomes.