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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8009F01.3
        

               
Conread position:
               
70-269
               

               
Cow position:
               
chr17:9853855-9854046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
70-282
               

               
Cow position:
               
chr17:24149046-24149261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
81-282
               

               
Cow position:
               
chr17:24752436-24752242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
82-290
               

               
Cow position:
               
chr17:20870221-20870013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
82-291
               

               
Cow position:
               
chr17:8079191-8079398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
26, 22
               

               
Conread position:
               
85-321
               

               
Cow position:
               
chr17:7654571-7654332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
87-288
               

               
Cow position:
               
chr17:2034421-2034612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
140, 12
               

               
Conread position:
               
87-291
               

               
Cow position:
               
chr17:6328995-6329201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
88-226
               

               
Cow position:
               
chr17:11056487-11056353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-251
               

               
Cow position:
               
chr17:35311310-35311471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
88-252
               

               
Cow position:
               
chr17:41029837-41029996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
88-261
               

               
Cow position:
               
chr17:5246779-5246948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-264
               

               
Cow position:
               
chr17:8544190-8544361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
88-264
               

               
Cow position:
               
chr17:21031666-21031844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-264
               

               
Cow position:
               
chr17:33121979-33122149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
88-267
               

               
Cow position:
               
chr17:1295687-1295511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
88-268
               

               
Cow position:
               
chr17:20990310-20990132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
88-268
               

               
Cow position:
               
chr17:34595828-34596001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
88-269
               

               
Cow position:
               
chr17:27429466-27429641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
126, 13
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr17:9778130-9778306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr17:14026038-14025848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 100
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr17:21298108-21298295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr17:24761344-24761165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
88-272
               

               
Cow position:
               
chr17:13143806-13143623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
88-276
               

               
Cow position:
               
chr17:21911036-21910852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
88-280
               

               
Cow position:
               
chr17:7697941-7698126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr17:18109202-18109007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr17:28539913-28540107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
88-283
               

               
Cow position:
               
chr17:6848689-6848875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
177, 19
               

               
Conread position:
               
88-283
               

               
Cow position:
               
chr17:44232831-44232636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
88-285
               

               
Cow position:
               
chr17:11156605-11156413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
176, 12
               

               
Conread position:
               
88-286
               

               
Cow position:
               
chr17:18720569-18720366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
88-287
               

               
Cow position:
               
chr17:9117531-9117726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
184, 20
               

               
Conread position:
               
88-287
               

               
Cow position:
               
chr17:17410173-17410375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr17:9565193-9565384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
88-290
               

               
Cow position:
               
chr17:24550058-24550260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr17:1113769-1113974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr17:7132567-7132354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr17:7142748-7142947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr17:11216007-11215806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr17:14762235-14762036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr17:15333829-15333624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr17:16371139-16371342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr17:20884407-20884609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr17:24821750-24821947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
155, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr17:25128462-25128267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
183, 21
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr17:32993737-32993538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
131, 78
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr17:39857277-39857476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr17:40771719-40771918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
88-295
               

               
Cow position:
               
chr17:20874274-20874486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 35
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr17:20932213-20932422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr17:21959803-21959597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr17:25097347-25097546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
89-270
               

               
Cow position:
               
chr17:3471299-3471482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
89-270
               

               
Cow position:
               
chr17:4786609-4786434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
89-276
               

               
Cow position:
               
chr17:9079312-9079136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
89-282
               

               
Cow position:
               
chr17:9746397-9746592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
89-286
               

               
Cow position:
               
chr17:38832921-38833124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
89-288
               

               
Cow position:
               
chr17:21738995-21738791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
89-291
               

               
Cow position:
               
chr17:5224282-5224485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
89-291
               

               
Cow position:
               
chr17:27048044-27048242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
89-321
               

               
Cow position:
               
chr17:18146063-18146302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
89-329
               

               
Cow position:
               
chr17:17060798-17060558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
90-282
               

               
Cow position:
               
chr17:30539365-30539186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
96-251
               

               
Cow position:
               
chr17:1505198-1505357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
99-291
               

               
Cow position:
               
chr17:10432082-10431892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
166, 10
               

               
Conread position:
               
101-281
               

               
Cow position:
               
chr17:17683011-17682828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 112
               

               
Conread position:
               
101-291
               

               
Cow position:
               
chr17:18860830-18860635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
102-282
               

               
Cow position:
               
chr17:12447507-12447324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
122, 80
               

               
Conread position:
               
103-291
               

               
Cow position:
               
chr17:25916792-25916981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
104-279
               

               
Cow position:
               
chr17:23246109-23246280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
117, 76
               

               
Conread position:
               
109-291
               

               
Cow position:
               
chr17:23517040-23516856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
100, 73
               

               
Conread position:
               
111-278
               

               
Cow position:
               
chr17:2662331-2662495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
112-293
               

               
Cow position:
               
chr17:15340847-15340664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
160, 61
               

               
Conread position:
               
112-296
               

               
Cow position:
               
chr17:22032785-22032607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
162, 69
               

               
Conread position:
               
113-261
               

               
Cow position:
               
chr17:42347318-42347170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
113-262
               

               
Cow position:
               
chr17:21495282-21495433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
113-264
               

               
Cow position:
               
chr17:242542-242695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
113-264
               

               
Cow position:
               
chr17:20305954-20306107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
113-264
               

               
Cow position:
               
chr17:25122502-25122351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
113-264
               

               
Cow position:
               
chr17:30734386-30734237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
113-264
               

               
Cow position:
               
chr17:32950179-32950332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
113-265
               

               
Cow position:
               
chr17:2839814-2839967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 68
               

               
Conread position:
               
113-265
               

               
Cow position:
               
chr17:24580390-24580236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
113-268
               

               
Cow position:
               
chr17:10510752-10510596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
113-269
               

               
Cow position:
               
chr17:12591073-12591231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 68
               

               
Conread position:
               
113-270
               

               
Cow position:
               
chr17:14003724-14003888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
113-270
               

               
Cow position:
               
chr17:22564087-22564251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
113-277
               

               
Cow position:
               
chr17:34207912-34207745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
113-278
               

               
Cow position:
               
chr17:3353787-3353945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
113-280
               

               
Cow position:
               
chr17:31231205-31231042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
159, 55
               

               
Conread position:
               
113-282
               

               
Cow position:
               
chr17:979250-979087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
113-282
               

               
Cow position:
               
chr17:20839655-20839489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
113-282
               

               
Cow position:
               
chr17:41290114-41289945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
106, 62
               

               
Conread position:
               
113-283
               

               
Cow position:
               
chr17:17266988-17266813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr17:5688451-5688280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
152, 68
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr17:32348980-32349152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr17:34751499-34751325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 63
               

               
Conread position:
               
113-287
               

               
Cow position:
               
chr17:13244134-13243963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
156, 68
               

               
Conread position:
               
113-287
               

               
Cow position:
               
chr17:38363080-38362901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
103, 67
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr17:1035694-1035514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr17:6566373-6566564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr17:10561536-10561717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
113-290
               

               
Cow position:
               
chr17:10459031-10458847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
106, 68
               

               
Conread position:
               
113-290
               

               
Cow position:
               
chr17:20126520-20126683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
113-290
               

               
Cow position:
               
chr17:22806630-22806458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
152, 53
               

               
Conread position:
               
113-290
               

               
Cow position:
               
chr17:24973858-24974026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
163, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:1040652-1040831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
157, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:3781951-3782129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 65
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:5900273-5900455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:11296545-11296735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:11664682-11664499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 46
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:11832213-11832029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:12059188-12059007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
106, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:13922385-13922569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
104, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:20993134-20992956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:24559199-24559376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:24587528-24587710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 70
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:25616165-25616335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
156, 57
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:25901103-25901286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:30665176-30665358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:32273780-32273601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
132, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:32989388-32989562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 53
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr17:40289092-40288914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
113-292
               

               
Cow position:
               
chr17:6624164-6624340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
113-293
               

               
Cow position:
               
chr17:21335788-21335604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
107, 68
               

               
Conread position:
               
113-296
               

               
Cow position:
               
chr17:11101894-11101712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
159, 68
               

               
Conread position:
               
113-296
               

               
Cow position:
               
chr17:26000023-26000208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 68
               

               
Conread position:
               
113-300
               

               
Cow position:
               
chr17:12536562-12536370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
113-310
               

               
Cow position:
               
chr17:24077308-24077506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
113-310
               

               
Cow position:
               
chr17:29472375-29472571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
113-321
               

               
Cow position:
               
chr17:21115044-21114837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 62
               

               
Conread position:
               
113-321
               

               
Cow position:
               
chr17:21922718-21922517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
113-325
               

               
Cow position:
               
chr17:28468042-28468245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
104, 53
               

               
Conread position:
               
114-248
               

               
Cow position:
               
chr17:5896003-5895869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
114-264
               

               
Cow position:
               
chr17:11921375-11921217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
114-270
               

               
Cow position:
               
chr17:14652873-14652717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
102, 67
               

               
Conread position:
               
114-285
               

               
Cow position:
               
chr17:267681-267505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
114-285
               

               
Cow position:
               
chr17:21628384-21628558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
114-289
               

               
Cow position:
               
chr17:8690535-8690361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
114-290
               

               
Cow position:
               
chr17:24883659-24883486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
155, 20
               

               
Conread position:
               
114-290
               

               
Cow position:
               
chr17:35339008-35338836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr17:18592351-18592528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 50
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr17:40741553-40741738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
114-296
               

               
Cow position:
               
chr17:32027551-32027361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
114-296
               

               
Cow position:
               
chr17:38614863-38615051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
114-298
               

               
Cow position:
               
chr17:31481129-31480956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
114-309
               

               
Cow position:
               
chr17:11281200-11280995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
114-309
               

               
Cow position:
               
chr17:25514216-25514018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
111, 67
               

               
Conread position:
               
114-320
               

               
Cow position:
               
chr17:30718512-30718300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
115-244
               

               
Cow position:
               
chr17:14883176-14883045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
115-257
               

               
Cow position:
               
chr17:21312902-21312759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
109, 66
               

               
Conread position:
               
115-268
               

               
Cow position:
               
chr17:36791043-36791197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
115-279
               

               
Cow position:
               
chr17:18920442-18920287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
115-279
               

               
Cow position:
               
chr17:20780419-20780580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
115-282
               

               
Cow position:
               
chr17:5733553-5733391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
115-284
               

               
Cow position:
               
chr17:21325241-21325411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 66
               

               
Conread position:
               
115-284
               

               
Cow position:
               
chr17:32278997-32278833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
115-284
               

               
Cow position:
               
chr17:32280575-32280739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
115-288
               

               
Cow position:
               
chr17:7760556-7760390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr17:6423669-6423850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 66
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr17:21489716-21489539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr17:38646968-38647147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
116-295
               

               
Cow position:
               
chr17:5006578-5006400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 67
               

               
Conread position:
               
117-264
               

               
Cow position:
               
chr17:27765180-27765330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 64
               

               
Conread position:
               
117-291
               

               
Cow position:
               
chr17:27203134-27202960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
117-309
               

               
Cow position:
               
chr17:23798189-23798386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
118-289
               

               
Cow position:
               
chr17:25032573-25032398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
119-270
               

               
Cow position:
               
chr17:17193405-17193555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
119-291
               

               
Cow position:
               
chr17:23883344-23883181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
153, 61
               

               
Conread position:
               
122-248
               

               
Cow position:
               
chr17:5382078-5381953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
122-257
               

               
Cow position:
               
chr17:20857932-20857794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
122-268
               

               
Cow position:
               
chr17:25342825-25342680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
122-291
               

               
Cow position:
               
chr17:20848437-20848608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
122-291
               

               
Cow position:
               
chr17:25612004-25612176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 58
               

               
Conread position:
               
122-291
               

               
Cow position:
               
chr17:33275832-33275664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
122-296
               

               
Cow position:
               
chr17:21758223-21758050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
149, 59
               

               
Conread position:
               
122-296
               

               
Cow position:
               
chr17:25502025-25502201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 58
               

               
Conread position:
               
123-269
               

               
Cow position:
               
chr17:27306074-27306222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
124-288
               

               
Cow position:
               
chr17:27058638-27058474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
126-291
               

               
Cow position:
               
chr17:36275259-36275419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
129-278
               

               
Cow position:
               
chr17:1466507-1466355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 52
               

               
Conread position:
               
129-280
               

               
Cow position:
               
chr17:11839639-11839788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 10
               

               
Conread position:
               
129-340
               

               
Cow position:
               
chr17:1469299-1469510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
88, 28
               

               
Conread position:
               
130-269
               

               
Cow position:
               
chr17:30359397-30359532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
105, 52
               

               
Conread position:
               
130-270
               

               
Cow position:
               
chr17:29025991-29026134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
130-277
               

               
Cow position:
               
chr17:1353322-1353467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
130-282
               

               
Cow position:
               
chr17:21293117-21292966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 51
               

               
Conread position:
               
130-291
               

               
Cow position:
               
chr17:26230874-26231040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
130-296
               

               
Cow position:
               
chr17:33271759-33271592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
130-303
               

               
Cow position:
               
chr17:21755506-21755334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
135, 52
               

               
Conread position:
               
130-321
               

               
Cow position:
               
chr17:2275398-2275587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
131-279
               

               
Cow position:
               
chr17:27795570-27795719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
46, 51
               

               
Conread position:
               
132-290
               

               
Cow position:
               
chr17:36864556-36864715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
135-288
               

               
Cow position:
               
chr17:20335591-20335743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
135-291
               

               
Cow position:
               
chr17:21806521-21806366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 30
               

               
Conread position:
               
136-288
               

               
Cow position:
               
chr17:15684442-15684593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
136, 46
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr17:25189217-25189371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
136-296
               

               
Cow position:
               
chr17:31856600-31856764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
139-286
               

               
Cow position:
               
chr17:14848605-14848461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
81, 36
               

               
Conread position:
               
142-291
               

               
Cow position:
               
chr17:40638885-40639033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
122, 39
               

               
Conread position:
               
150-270
               

               
Cow position:
               
chr17:7590514-7590400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
150-293
               

               
Cow position:
               
chr17:16158434-16158579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
155-280
               

               
Cow position:
               
chr17:4213694-4213817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
158-291
               

               
Cow position:
               
chr17:25126303-25126436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
159-293
               

               
Cow position:
               
chr17:22017135-22016996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 23
               
Show alignments to all cow chromosomes.