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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8009F01.3
        

               
Conread position:
               
68-291
               

               
Cow position:
               
chr22:5837085-5837312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
151, 111
               

               
Conread position:
               
82-265
               

               
Cow position:
               
chr22:45513688-45513505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 103
               

               
Conread position:
               
82-291
               

               
Cow position:
               
chr22:25943310-25943517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
84-340
               

               
Cow position:
               
chr22:23856885-23857137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
188, 24
               

               
Conread position:
               
87-282
               

               
Cow position:
               
chr22:41271160-41270968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
185, 21
               

               
Conread position:
               
87-286
               

               
Cow position:
               
chr22:19047980-19047781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
88-245
               

               
Cow position:
               
chr22:26316309-26316464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-247
               

               
Cow position:
               
chr22:26106898-26107055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 13
               

               
Conread position:
               
88-264
               

               
Cow position:
               
chr22:12598927-12599100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
88-264
               

               
Cow position:
               
chr22:28731515-28731690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
88-267
               

               
Cow position:
               
chr22:3533784-3533952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
88-269
               

               
Cow position:
               
chr22:13286290-13286473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr22:3987356-3987535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr22:4974584-4974404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-274
               

               
Cow position:
               
chr22:1309888-1309707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
88-274
               

               
Cow position:
               
chr22:32651338-32651527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
88-279
               

               
Cow position:
               
chr22:6123060-6122876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
88-280
               

               
Cow position:
               
chr22:38980738-38980924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr22:10585861-10585670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
134, 20
               

               
Conread position:
               
88-287
               

               
Cow position:
               
chr22:33448244-33448043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr22:534337-534538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr22:5384491-5384694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr22:10420871-10421071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr22:25476903-25477085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr22:32698600-32698799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr22:40121038-40120837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
88-289
               

               
Cow position:
               
chr22:15090580-15090782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
88-290
               

               
Cow position:
               
chr22:8324089-8324280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
176, 11
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:1640465-1640258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:2623679-2623480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:4119725-4119520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:6097185-6096975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:7164793-7165004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:9127246-9127450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:10685248-10685046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:10983188-10983392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
129, 13
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:11130710-11130912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:12315651-12315853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:14691132-14690929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:17814064-17814274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:20626681-20626879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
184, 13
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:26339596-26339796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:26969622-26969825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:27740728-27740932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 98
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:28351816-28351617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:30699019-30699223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
121, 13
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:32480639-32480438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:34476168-34475958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:34712557-34712768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr22:37324386-37324586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
88-292
               

               
Cow position:
               
chr22:37201693-37201893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
88-298
               

               
Cow position:
               
chr22:34606423-34606629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
88-302
               

               
Cow position:
               
chr22:41245085-41245297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
132, 11
               

               
Conread position:
               
88-305
               

               
Cow position:
               
chr22:26097781-26097561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
136, 18
               

               
Conread position:
               
88-313
               

               
Cow position:
               
chr22:40349190-40349408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
181, 11
               

               
Conread position:
               
88-319
               

               
Cow position:
               
chr22:26151276-26151037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
88-321
               

               
Cow position:
               
chr22:13840977-13841212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
88-321
               

               
Cow position:
               
chr22:35753462-35753236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
89-270
               

               
Cow position:
               
chr22:22146068-22146252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
89-282
               

               
Cow position:
               
chr22:30269250-30269445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
89-291
               

               
Cow position:
               
chr22:644926-644726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
89-291
               

               
Cow position:
               
chr22:22861071-22860870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
173, 92
               

               
Conread position:
               
89-291
               

               
Cow position:
               
chr22:30515087-30515299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
89-296
               

               
Cow position:
               
chr22:3316963-3317168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
130, 10
               

               
Conread position:
               
89-296
               

               
Cow position:
               
chr22:43292062-43291855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
16, 97
               

               
Conread position:
               
90-291
               

               
Cow position:
               
chr22:17764222-17764421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
100-270
               

               
Cow position:
               
chr22:27681564-27681736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
101-287
               

               
Cow position:
               
chr22:3965034-3965224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
103-291
               

               
Cow position:
               
chr22:27322168-27322356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
104-288
               

               
Cow position:
               
chr22:16251712-16251534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
110-311
               

               
Cow position:
               
chr22:44410585-44410783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 72
               

               
Conread position:
               
112-290
               

               
Cow position:
               
chr22:4061085-4060906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
113, 70
               

               
Conread position:
               
113-222
               

               
Cow position:
               
chr22:26123468-26123360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
113-250
               

               
Cow position:
               
chr22:1822012-1821872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
113-255
               

               
Cow position:
               
chr22:18219028-18218885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
113-262
               

               
Cow position:
               
chr22:6360627-6360475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
107, 68
               

               
Conread position:
               
113-264
               

               
Cow position:
               
chr22:14178964-14178814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 71
               

               
Conread position:
               
113-268
               

               
Cow position:
               
chr22:15668612-15668451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
113-270
               

               
Cow position:
               
chr22:11767188-11767031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
113-270
               

               
Cow position:
               
chr22:24734450-24734293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
105, 68
               

               
Conread position:
               
113-270
               

               
Cow position:
               
chr22:26506862-26506705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
113-270
               

               
Cow position:
               
chr22:37029737-37029585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 54
               

               
Conread position:
               
113-271
               

               
Cow position:
               
chr22:11500642-11500799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
113-275
               

               
Cow position:
               
chr22:10292824-10292991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
113-279
               

               
Cow position:
               
chr22:1266068-1265894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
113-279
               

               
Cow position:
               
chr22:26658917-26659079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
113-280
               

               
Cow position:
               
chr22:27835392-27835564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
113-282
               

               
Cow position:
               
chr22:8090666-8090496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 66
               

               
Conread position:
               
113-282
               

               
Cow position:
               
chr22:36433107-36432937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 64
               

               
Conread position:
               
113-283
               

               
Cow position:
               
chr22:4017339-4017511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
106, 68
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr22:1279526-1279351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr22:3241837-3241666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr22:11257873-11257710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
113-287
               

               
Cow position:
               
chr22:26184300-26184123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
113-287
               

               
Cow position:
               
chr22:40789431-40789604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
111, 63
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr22:11458690-11458857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr22:22553373-22553201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr22:24628788-24628619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr22:25222037-25221859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
113-288
               

               
Cow position:
               
chr22:32895079-32895254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
104, 66
               

               
Conread position:
               
113-289
               

               
Cow position:
               
chr22:7838456-7838630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
167, 23
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr22:1975474-1975656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
104, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr22:3993474-3993652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
159, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr22:4583419-4583601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr22:4645635-4645815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr22:10678122-10677949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 62
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr22:15039320-15039142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr22:16044559-16044374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr22:19173561-19173738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr22:23854836-23855015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
111, 67
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr22:30483779-30483957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
159, 68
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr22:31592997-31592814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr22:38439292-38439115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr22:44180453-44180635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
113-296
               

               
Cow position:
               
chr22:8733469-8733290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 62
               

               
Conread position:
               
113-296
               

               
Cow position:
               
chr22:10339251-10339072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
108, 51
               

               
Conread position:
               
113-309
               

               
Cow position:
               
chr22:30963983-30964189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
12, 5
               

               
Conread position:
               
113-310
               

               
Cow position:
               
chr22:31153818-31154015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
159, 66
               

               
Conread position:
               
113-313
               

               
Cow position:
               
chr22:19775569-19775367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
104, 68
               

               
Conread position:
               
113-321
               

               
Cow position:
               
chr22:45846008-45846215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
113-326
               

               
Cow position:
               
chr22:27291957-27292166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
166, 68
               

               
Conread position:
               
114-261
               

               
Cow position:
               
chr22:25341883-25342026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
114-268
               

               
Cow position:
               
chr22:5042183-5042331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
114-271
               

               
Cow position:
               
chr22:13670311-13670152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
114-285
               

               
Cow position:
               
chr22:15959908-15959731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 96
               

               
Conread position:
               
114-285
               

               
Cow position:
               
chr22:25629900-25629728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
114-286
               

               
Cow position:
               
chr22:12946306-12946140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
114-288
               

               
Cow position:
               
chr22:18926218-18926395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 35
               

               
Conread position:
               
114-290
               

               
Cow position:
               
chr22:17295067-17294895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
158, 20
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr22:6622382-6622205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr22:14924869-14924690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
110, 67
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr22:23689342-23689162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
114-291
               

               
Cow position:
               
chr22:27329029-27328852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
114-296
               

               
Cow position:
               
chr22:21325871-21325686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
114-309
               

               
Cow position:
               
chr22:38930647-38930446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
114-320
               

               
Cow position:
               
chr22:21012253-21012456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
103, 53
               

               
Conread position:
               
115-270
               

               
Cow position:
               
chr22:19787816-19787658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
115-280
               

               
Cow position:
               
chr22:3950114-3950284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
115-282
               

               
Cow position:
               
chr22:2912718-2912553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
115-288
               

               
Cow position:
               
chr22:5337733-5337559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
115-288
               

               
Cow position:
               
chr22:8412392-8412567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
144, 62
               

               
Conread position:
               
115-288
               

               
Cow position:
               
chr22:12968207-12968030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr22:15025245-15025068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
150, 68
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr22:15490523-15490696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr22:16822967-16823141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
104, 67
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr22:21502607-21502787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr22:26422047-26421879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
152, 98
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr22:28665149-28665325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr22:34750542-34750717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
115-296
               

               
Cow position:
               
chr22:30049705-30049519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
115-310
               

               
Cow position:
               
chr22:10302878-10303077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
116-291
               

               
Cow position:
               
chr22:6936131-6936299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
116-291
               

               
Cow position:
               
chr22:21355273-21355099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
154, 65
               

               
Conread position:
               
116-291
               

               
Cow position:
               
chr22:34726537-34726710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
117-283
               

               
Cow position:
               
chr22:28058187-28058018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
117-291
               

               
Cow position:
               
chr22:877379-877557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
117-291
               

               
Cow position:
               
chr22:25387190-25387369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
118-279
               

               
Cow position:
               
chr22:14372050-14372207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
118-282
               

               
Cow position:
               
chr22:14638616-14638447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 64
               

               
Conread position:
               
118-291
               

               
Cow position:
               
chr22:28071423-28071601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
8, 65
               

               
Conread position:
               
122-265
               

               
Cow position:
               
chr22:2523835-2523976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
122-284
               

               
Cow position:
               
chr22:21567866-21568028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
122-288
               

               
Cow position:
               
chr22:5616175-5616341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
124-280
               

               
Cow position:
               
chr22:3325457-3325613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 57
               

               
Conread position:
               
125-282
               

               
Cow position:
               
chr22:9597706-9597544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
125-282
               

               
Cow position:
               
chr22:21890482-21890324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
125-292
               

               
Cow position:
               
chr22:9372397-9372564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 25
               

               
Conread position:
               
126-245
               

               
Cow position:
               
chr22:35579167-35579046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
129-262
               

               
Cow position:
               
chr22:11497078-11497212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 52
               

               
Conread position:
               
129-270
               

               
Cow position:
               
chr22:41045033-41044890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
129-288
               

               
Cow position:
               
chr22:21746521-21746684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
88, 48
               

               
Conread position:
               
129-291
               

               
Cow position:
               
chr22:1848949-1849116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
129-291
               

               
Cow position:
               
chr22:4076011-4075845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
129-291
               

               
Cow position:
               
chr22:10609232-10609400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 52
               

               
Conread position:
               
129-291
               

               
Cow position:
               
chr22:23833168-23833337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
130-266
               

               
Cow position:
               
chr22:30712639-30712775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
130-269
               

               
Cow position:
               
chr22:1602072-1602207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
130-280
               

               
Cow position:
               
chr22:16621055-16621205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
130-283
               

               
Cow position:
               
chr22:2627454-2627606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
130-286
               

               
Cow position:
               
chr22:12341074-12341234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
130-291
               

               
Cow position:
               
chr22:12388976-12389141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
130-291
               

               
Cow position:
               
chr22:23176558-23176399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 52
               

               
Conread position:
               
130-291
               

               
Cow position:
               
chr22:43237528-43237366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
139, 52
               

               
Conread position:
               
130-309
               

               
Cow position:
               
chr22:7153765-7153941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
131-265
               

               
Cow position:
               
chr22:15020516-15020384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
131-291
               

               
Cow position:
               
chr22:1911550-1911707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
141, 21
               

               
Conread position:
               
131-291
               

               
Cow position:
               
chr22:19890840-19891000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
105, 50
               

               
Conread position:
               
132-287
               

               
Cow position:
               
chr22:46568007-46567853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
140, 49
               

               
Conread position:
               
136-245
               

               
Cow position:
               
chr22:32952361-32952471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 45
               

               
Conread position:
               
136-251
               

               
Cow position:
               
chr22:20687189-20687302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
136-264
               

               
Cow position:
               
chr22:10362955-10363081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
136-283
               

               
Cow position:
               
chr22:13221996-13222146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr22:6852698-6852542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
91, 45
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr22:12829726-12829567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 45
               

               
Conread position:
               
137-269
               

               
Cow position:
               
chr22:15915156-15915024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
142-270
               

               
Cow position:
               
chr22:3264356-3264224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
142-282
               

               
Cow position:
               
chr22:47555742-47555881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
143-287
               

               
Cow position:
               
chr22:4135510-4135654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
116, 40
               

               
Conread position:
               
143-291
               

               
Cow position:
               
chr22:3842510-3842659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
149-270
               

               
Cow position:
               
chr22:23122111-23121987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
159-291
               

               
Cow position:
               
chr22:18293853-18293723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
160-291
               

               
Cow position:
               
chr22:34618705-34618840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
165-296
               

               
Cow position:
               
chr22:12678506-12678375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
166-296
               

               
Cow position:
               
chr22:10553770-10553638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
473-638
               

               
Cow position:
               
chr22:7871348-7871178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 129
               

               
Conread position:
               
507-660
               

               
Cow position:
               
chr22:28165402-28165248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 26
               
Show alignments to all cow chromosomes.