Cow genome map

Conread name: Ss1.1-Pig3-SRG8009F01.3

Conread position: 66-287
Cow position: chr26:8352799-8353027 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 153, 14

Conread position: 87-288
Cow position: chr26:5246629-5246419 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 41

Conread position: 88-262
Cow position: chr26:9850241-9850066 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 20

Conread position: 88-262
Cow position: chr26:9853751-9853576 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 20

Conread position: 88-264
Cow position: chr26:6447743-6447564 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 20

Conread position: 88-264
Cow position: chr26:16549845-16550017 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 88-265
Cow position: chr26:32672578-32672403 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 20

Conread position: 88-270
Cow position: chr26:613821-613636 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 32

Conread position: 88-280
Cow position: chr26:35448921-35449112 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 129, 20

Conread position: 88-282
Cow position: chr26:8642800-8642997 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 99

Conread position: 88-282
Cow position: chr26:12964836-12964641 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 126, 20

Conread position: 88-282
Cow position: chr26:20013338-20013531 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 131, 20

Conread position: 88-286
Cow position: chr26:6475572-6475373 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 126, 11

Conread position: 88-287
Cow position: chr26:15200658-15200458 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 20

Conread position: 88-288
Cow position: chr26:22249618-22249418 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 56, 13

Conread position: 88-288
Cow position: chr26:22354273-22354472 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 20

Conread position: 88-291
Cow position: chr26:9867257-9867064 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 184, 13

Conread position: 88-291
Cow position: chr26:13021285-13021083 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 124, 20

Conread position: 88-291
Cow position: chr26:14175140-14175344 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 94, 20

Conread position: 88-291
Cow position: chr26:23097318-23097122 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 16

Conread position: 88-291
Cow position: chr26:26466861-26466670 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 86, 20

Conread position: 88-291
Cow position: chr26:32898011-32897807 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 13

Conread position: 88-292
Cow position: chr26:11263501-11263702 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 49, 20

Conread position: 88-295
Cow position: chr26:30568797-30568597 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 131, 13

Conread position: 88-309
Cow position: chr26:19459544-19459774 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 19

Conread position: 89-274
Cow position: chr26:2531320-2531139 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 12

Conread position: 101-265
Cow position: chr26:21242971-21243136 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 18

Conread position: 101-274
Cow position: chr26:32955759-32955591 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 126, 8

Conread position: 103-231
Cow position: chr26:21351562-21351691 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 116, 32

Conread position: 105-262
Cow position: chr26:20448840-20448993 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 18

Conread position: 108-285
Cow position: chr26:2994815-2994643 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 74

Conread position: 110-264
Cow position: chr26:13979251-13979098 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 21, 73

Conread position: 110-291
Cow position: chr26:6714414-6714240 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 149, 71

Conread position: 112-270
Cow position: chr26:34108644-34108798 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 145, 69

Conread position: 112-277
Cow position: chr26:31779357-31779528 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 53

Conread position: 112-285
Cow position: chr26:798417-798242 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 51

Conread position: 112-291
Cow position: chr26:12893540-12893365 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 164, 34

Conread position: 113-247
Cow position: chr26:31889975-31890108 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 69

Conread position: 113-248
Cow position: chr26:23926104-23925968 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 107, 68

Conread position: 113-262
Cow position: chr26:8819981-8819827 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 71

Conread position: 113-264
Cow position: chr26:14958133-14957986 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 70

Conread position: 113-270
Cow position: chr26:29353625-29353468 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 45, 70

Conread position: 113-270
Cow position: chr26:32013509-32013672 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 69

Conread position: 113-280
Cow position: chr26:25393913-25394081 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 107, 68

Conread position: 113-283
Cow position: chr26:12155237-12155067 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 70

Conread position: 113-284
Cow position: chr26:20846509-20846678 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 141, 69

Conread position: 113-286
Cow position: chr26:14905929-14905751 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 68

Conread position: 113-287
Cow position: chr26:7315220-7315051 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 113-288
Cow position: chr26:26294314-26294137 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 100, 68

Conread position: 113-289
Cow position: chr26:22152107-22152287 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 24, 71

Conread position: 113-291
Cow position: chr26:10747744-10747572 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 113-291
Cow position: chr26:19774421-19774237 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 70

Conread position: 113-291
Cow position: chr26:20551025-20551206 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 101, 11

Conread position: 113-291
Cow position: chr26:23315652-23315835 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 114, 68

Conread position: 113-291
Cow position: chr26:25526129-25526311 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 68

Conread position: 113-296
Cow position: chr26:9491808-9491989 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 101, 64

Conread position: 113-303
Cow position: chr26:34256183-34256380 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 70

Conread position: 113-309
Cow position: chr26:586993-586799 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 159, 68

Conread position: 113-313
Cow position: chr26:31605288-31605491 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 100, 68

Conread position: 114-264
Cow position: chr26:33253438-33253283 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 70

Conread position: 114-265
Cow position: chr26:25737354-25737505 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 70

Conread position: 114-269
Cow position: chr26:33011785-33011630 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 21, 72

Conread position: 114-279
Cow position: chr26:32834691-32834529 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 23, 69

Conread position: 114-287
Cow position: chr26:29332973-29333151 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 64

Conread position: 114-291
Cow position: chr26:34314572-34314753 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 17, 68

Conread position: 114-295
Cow position: chr26:6723985-6724167 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 25, 70

Conread position: 114-320
Cow position: chr26:4585325-4585119 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 70

Conread position: 115-270
Cow position: chr26:18692308-18692460 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 115-282
Cow position: chr26:27491617-27491445 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 106, 66

Conread position: 115-287
Cow position: chr26:5361085-5360921 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 157, 51

Conread position: 115-291
Cow position: chr26:14578210-14578389 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 17, 43

Conread position: 115-304
Cow position: chr26:10768027-10767838 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 166, 67

Conread position: 115-321
Cow position: chr26:8811014-8811220 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 161, 66

Conread position: 116-282
Cow position: chr26:12238137-12237976 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 101, 59

Conread position: 118-276
Cow position: chr26:11134808-11134642 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 103, 63

Conread position: 118-291
Cow position: chr26:2739571-2739393 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 99, 63

Conread position: 121-286
Cow position: chr26:9604449-9604619 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 122-276
Cow position: chr26:25299490-25299644 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 61

Conread position: 122-291
Cow position: chr26:8700155-8699985 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 98, 16

Conread position: 122-291
Cow position: chr26:21991993-21992164 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 61

Conread position: 122-296
Cow position: chr26:33567156-33566977 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 61

Conread position: 123-288
Cow position: chr26:32832079-32832243 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 91, 58

Conread position: 125-264
Cow position: chr26:16921833-16921971 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 39

Conread position: 129-291
Cow position: chr26:31633627-31633790 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 124, 52

Conread position: 129-296
Cow position: chr26:34060232-34060400 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 137, 53

Conread position: 130-251
Cow position: chr26:7153240-7153366 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 51

Conread position: 130-287
Cow position: chr26:6486755-6486593 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 52

Conread position: 130-288
Cow position: chr26:4807461-4807613 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 130-288
Cow position: chr26:9104380-9104222 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 51

Conread position: 136-296
Cow position: chr26:13827978-13828136 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 45

Conread position: 137-291
Cow position: chr26:6794057-6794207 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 45

Conread position: 138-279
Cow position: chr26:32776600-32776456 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 83, 44

Conread position: 138-291
Cow position: chr26:32836148-32836301 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 134, 43

Conread position: 139-291
Cow position: chr26:29889589-29889452 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 139-320
Cow position: chr26:30254719-30254540 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 126, 41

Conread position: 142-282
Cow position: chr26:10965678-10965541 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 123, 40

Conread position: 142-285
Cow position: chr26:26928-26783 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 75, 40

Conread position: 142-291
Cow position: chr26:6864927-6865086 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 75, 40

Conread position: 142-291
Cow position: chr26:32842890-32842743 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 140, 40

Conread position: 143-314
Cow position: chr26:32815880-32815705 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 77, 38

Conread position: 152-291
Cow position: chr26:18877036-18876900 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 120, 30

Conread position: 152-291
Cow position: chr26:34106320-34106455 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 175-309
Cow position: chr26:22603095-22602957 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 7

Show alignments to all cow chromosomes.