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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8009H15.5
        

               
Conread position:
               
23-350
               

               
Cow position:
               
chr15:1735577-1735920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
38-438
               

               
Cow position:
               
chr15:47279651-47280046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
37, 28
               

               
Conread position:
               
40-326
               

               
Cow position:
               
chr15:224938-225242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
40-420
               

               
Cow position:
               
chr15:41323958-41323563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 379
               

               
Conread position:
               
40-425
               

               
Cow position:
               
chr15:32741949-32742346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
180, 31
               

               
Conread position:
               
42-398
               

               
Cow position:
               
chr15:13545594-13545240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
219, 20
               

               
Conread position:
               
42-432
               

               
Cow position:
               
chr15:22531556-22531161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
44-392
               

               
Cow position:
               
chr15:61357-61722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 336
               

               
Conread position:
               
46-392
               

               
Cow position:
               
chr15:4728625-4728983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
174, 25
               

               
Conread position:
               
46-573
               

               
Cow position:
               
chr15:33306600-33306069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 11
               

               
Conread position:
               
48-257
               

               
Cow position:
               
chr15:49073643-49073856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
48-446
               

               
Cow position:
               
chr15:16936376-16936763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
276, 23
               

               
Conread position:
               
49-419
               

               
Cow position:
               
chr15:16741544-16741925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
146, 129
               

               
Conread position:
               
51-437
               

               
Cow position:
               
chr15:49685728-49685330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 124
               

               
Conread position:
               
51-449
               

               
Cow position:
               
chr15:13681220-13681603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 6
               

               
Conread position:
               
55-437
               

               
Cow position:
               
chr15:18230485-18230892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
55-531
               

               
Cow position:
               
chr15:3007359-3006867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
56-253
               

               
Cow position:
               
chr15:10839447-10839632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
56-255
               

               
Cow position:
               
chr15:19782588-19782791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
56-294
               

               
Cow position:
               
chr15:16303531-16303294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
56-326
               

               
Cow position:
               
chr15:8629791-8630081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
56-326
               

               
Cow position:
               
chr15:37039824-37040096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 119
               

               
Conread position:
               
56-364
               

               
Cow position:
               
chr15:23054741-23054421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 130
               

               
Conread position:
               
56-404
               

               
Cow position:
               
chr15:9071943-9072305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 123
               

               
Conread position:
               
56-417
               

               
Cow position:
               
chr15:21695691-21696049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 125
               

               
Conread position:
               
56-419
               

               
Cow position:
               
chr15:27892467-27892120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
196, 10
               

               
Conread position:
               
57-210
               

               
Cow position:
               
chr15:10454332-10454181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
57-255
               

               
Cow position:
               
chr15:8061680-8061875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
57-391
               

               
Cow position:
               
chr15:9267578-9267914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
20, 167
               

               
Conread position:
               
57-398
               

               
Cow position:
               
chr15:1831049-1830692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
57-398
               

               
Cow position:
               
chr15:19403460-19403112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 131
               

               
Conread position:
               
57-403
               

               
Cow position:
               
chr15:18018407-18018050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 168
               

               
Conread position:
               
57-409
               

               
Cow position:
               
chr15:4373961-4373595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
15, 291
               

               
Conread position:
               
57-419
               

               
Cow position:
               
chr15:7962567-7962189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
118, 40
               

               
Conread position:
               
57-431
               

               
Cow position:
               
chr15:45112039-45111657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
204, 9
               

               
Conread position:
               
57-555
               

               
Cow position:
               
chr15:21388686-21389189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 116
               

               
Conread position:
               
57-606
               

               
Cow position:
               
chr15:794534-795098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 128
               

               
Conread position:
               
57-607
               

               
Cow position:
               
chr15:20369987-20370534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
57-640
               

               
Cow position:
               
chr15:16112887-16112281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 131
               

               
Conread position:
               
58-326
               

               
Cow position:
               
chr15:17288471-17288744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 171
               

               
Conread position:
               
58-328
               

               
Cow position:
               
chr15:32475893-32475608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
58-359
               

               
Cow position:
               
chr15:581972-582286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 245
               

               
Conread position:
               
58-384
               

               
Cow position:
               
chr15:22161064-22160725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
58-394
               

               
Cow position:
               
chr15:39418369-39418058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
58-417
               

               
Cow position:
               
chr15:1670291-1670641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
119, 107
               

               
Conread position:
               
58-446
               

               
Cow position:
               
chr15:7749659-7750052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 166
               

               
Conread position:
               
59-213
               

               
Cow position:
               
chr15:10243608-10243761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
59-358
               

               
Cow position:
               
chr15:27732882-27732573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 140
               

               
Conread position:
               
59-360
               

               
Cow position:
               
chr15:24976706-24977028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 237
               

               
Conread position:
               
59-375
               

               
Cow position:
               
chr15:37985073-37985398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 139
               

               
Conread position:
               
59-406
               

               
Cow position:
               
chr15:6282463-6282808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
59-441
               

               
Cow position:
               
chr15:29272676-29272277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
60-233
               

               
Cow position:
               
chr15:20422284-20422456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
60-251
               

               
Cow position:
               
chr15:6321131-6321310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
60-409
               

               
Cow position:
               
chr15:4676525-4676887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
60-420
               

               
Cow position:
               
chr15:143752-144126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 113
               

               
Conread position:
               
60-441
               

               
Cow position:
               
chr15:43030541-43030937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 355
               

               
Conread position:
               
60-545
               

               
Cow position:
               
chr15:10456519-10457026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 389
               

               
Conread position:
               
60-552
               

               
Cow position:
               
chr15:30047055-30047566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 502
               

               
Conread position:
               
60-622
               

               
Cow position:
               
chr15:19119136-19119694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 177
               

               
Conread position:
               
60-638
               

               
Cow position:
               
chr15:32226408-32226985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 122
               

               
Conread position:
               
61-351
               

               
Cow position:
               
chr15:26388504-26388200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
196, 126
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr15:14627466-14627808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
61-426
               

               
Cow position:
               
chr15:24617043-24616674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
207, 144
               

               
Conread position:
               
61-644
               

               
Cow position:
               
chr15:37382103-37381508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 118
               

               
Conread position:
               
62-242
               

               
Cow position:
               
chr15:33455787-33455967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr15:19910855-19910652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
62-438
               

               
Cow position:
               
chr15:17260683-17261067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 121
               

               
Conread position:
               
62-438
               

               
Cow position:
               
chr15:53118813-53118413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
119, 173
               

               
Conread position:
               
63-263
               

               
Cow position:
               
chr15:36643413-36643614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
63-310
               

               
Cow position:
               
chr15:32690444-32690709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
63-394
               

               
Cow position:
               
chr15:5722202-5722534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 194
               

               
Conread position:
               
63-441
               

               
Cow position:
               
chr15:5498552-5498944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
64-179
               

               
Cow position:
               
chr15:24129161-24129044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
64-259
               

               
Cow position:
               
chr15:10442113-10442309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
64-262
               

               
Cow position:
               
chr15:28513608-28513807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 161
               

               
Conread position:
               
64-326
               

               
Cow position:
               
chr15:29542476-29542200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
12, 160
               

               
Conread position:
               
64-346
               

               
Cow position:
               
chr15:52197836-52198124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
64-461
               

               
Cow position:
               
chr15:23703245-23702849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 101
               

               
Conread position:
               
64-518
               

               
Cow position:
               
chr15:32979552-32980021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 356
               

               
Conread position:
               
64-644
               

               
Cow position:
               
chr15:25208290-25208876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 97
               

               
Conread position:
               
66-215
               

               
Cow position:
               
chr15:38936396-38936248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
66-307
               

               
Cow position:
               
chr15:27422922-27423163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
66-374
               

               
Cow position:
               
chr15:4655320-4655640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 176
               

               
Conread position:
               
66-392
               

               
Cow position:
               
chr15:5008499-5008154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
66-392
               

               
Cow position:
               
chr15:5020850-5021194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
66-392
               

               
Cow position:
               
chr15:7586305-7585961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
66-408
               

               
Cow position:
               
chr15:33313970-33314328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 327
               

               
Conread position:
               
66-409
               

               
Cow position:
               
chr15:30800359-30800004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
66-432
               

               
Cow position:
               
chr15:21908918-21908536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 346
               

               
Conread position:
               
66-437
               

               
Cow position:
               
chr15:20015658-20015271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 354
               

               
Conread position:
               
66-438
               

               
Cow position:
               
chr15:13683811-13684175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 102
               

               
Conread position:
               
66-446
               

               
Cow position:
               
chr15:51632570-51632952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
148, 222
               

               
Conread position:
               
66-521
               

               
Cow position:
               
chr15:363490-363034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
66-552
               

               
Cow position:
               
chr15:34206724-34207208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 82
               

               
Conread position:
               
66-640
               

               
Cow position:
               
chr15:24797326-24797923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
8, 58
               

               
Conread position:
               
66-641
               

               
Cow position:
               
chr15:43827299-43827897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
67-205
               

               
Cow position:
               
chr15:9520759-9520619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-216
               

               
Cow position:
               
chr15:46861042-46861193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-220
               

               
Cow position:
               
chr15:6617291-6617446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-224
               

               
Cow position:
               
chr15:2820847-2821006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr15:62946-63106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr15:2663001-2662840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr15:4632134-4631974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr15:4670039-4669879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr15:6370919-6370759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr15:7511850-7511690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr15:16800233-16800073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr15:21645968-21646128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr15:29654139-29654299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr15:39560369-39560529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr15:42597535-42597695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr15:43029339-43029498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr15:50057667-50057507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-241
               

               
Cow position:
               
chr15:8047802-8047975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
67-255
               

               
Cow position:
               
chr15:13077016-13077203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
67-270
               

               
Cow position:
               
chr15:7847110-7846905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-330
               

               
Cow position:
               
chr15:6377617-6377339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 228
               

               
Conread position:
               
67-350
               

               
Cow position:
               
chr15:3719911-3719610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-350
               

               
Cow position:
               
chr15:28981942-28981642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-351
               

               
Cow position:
               
chr15:42727864-42728160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
67-360
               

               
Cow position:
               
chr15:12417222-12416919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-364
               

               
Cow position:
               
chr15:2015945-2016263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
67-364
               

               
Cow position:
               
chr15:43239947-43239632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-370
               

               
Cow position:
               
chr15:49214745-49214425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 239
               

               
Conread position:
               
67-371
               

               
Cow position:
               
chr15:488782-488460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-388
               

               
Cow position:
               
chr15:20132558-20132892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:67073-66734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
154, 300
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:2081564-2081910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:3893077-3893416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
174, 71
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:6764367-6764025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:7271835-7272180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:7453177-7452834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:7841813-7842158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:9835243-9835586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:10034180-10033837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:10827347-10827690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:12184299-12183956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:15139068-15138725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:16937149-16937492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:19370005-19369668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
150, 168
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:20404190-20403845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:21637766-21638113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:25133434-25133778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:25540094-25539753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:29008859-29008515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:31357108-31356765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
22, 170
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:32064806-32064471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
153, 15
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:33376332-33376675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:37370362-37370018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:38644485-38644144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:42584700-42585043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:44356951-44356608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:48557214-48557556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:49191073-49190729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:50309435-50309778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:52744621-52744276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:52758327-52757985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 292
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:52764255-52764587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
22, 269
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:53419822-53419479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-393
               

               
Cow position:
               
chr15:32611316-32611660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-395
               

               
Cow position:
               
chr15:51221236-51221576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
67-423
               

               
Cow position:
               
chr15:4389241-4389611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
16, 343
               

               
Conread position:
               
67-423
               

               
Cow position:
               
chr15:29476049-29475678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 344
               

               
Conread position:
               
67-426
               

               
Cow position:
               
chr15:15234058-15233679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
16, 304
               

               
Conread position:
               
67-431
               

               
Cow position:
               
chr15:25203479-25203101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 317
               

               
Conread position:
               
67-431
               

               
Cow position:
               
chr15:39016130-39015750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr15:5479945-5479565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 352
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr15:6015581-6015193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr15:22918536-22918154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 348
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr15:29018081-29018462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr15:42595251-42595620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr15:43756662-43756281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
67-433
               

               
Cow position:
               
chr15:7268089-7268470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:2008796-2009178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 86
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:3734612-3734228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
149, 351
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:3837761-3838145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
149, 351
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:4640946-4641331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
25, 341
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:6158673-6159059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
23, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:8031422-8031039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 145
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:9160279-9159894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
22, 352
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:11595889-11595507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
149, 36
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:16485722-16486108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:16738294-16737909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 291
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:21438334-21437948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:21958484-21958870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:23554919-23554533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:25181338-25180952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:29236192-29236578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 314
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:31270916-31271302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
25, 291
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:31489545-31489928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 278
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:32292901-32292515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:33753814-33754200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:38199099-38199485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:41105551-41105165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:44355666-44355280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:45707790-45708176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:45944205-45943819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:49307286-49307669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 245
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:50142032-50141646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:50142752-50143138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:52980045-52979659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 345
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr15:53053569-53053955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 341
               

               
Conread position:
               
67-441
               

               
Cow position:
               
chr15:50086072-50085679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-446
               

               
Cow position:
               
chr15:7578651-7579041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
16, 343
               

               
Conread position:
               
67-461
               

               
Cow position:
               
chr15:2534224-2534636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-531
               

               
Cow position:
               
chr15:18263618-18263136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
68-220
               

               
Cow position:
               
chr15:2632333-2632181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 106
               

               
Conread position:
               
68-432
               

               
Cow position:
               
chr15:36328968-36328592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
160, 104
               

               
Conread position:
               
69-179
               

               
Cow position:
               
chr15:38395094-38394984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
69-421
               

               
Cow position:
               
chr15:53183107-53183467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
71-220
               

               
Cow position:
               
chr15:6588460-6588312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
71-220
               

               
Cow position:
               
chr15:44771329-44771477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
71-293
               

               
Cow position:
               
chr15:3903346-3903568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
197, 116
               

               
Conread position:
               
71-372
               

               
Cow position:
               
chr15:31160784-31160473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
190, 32
               

               
Conread position:
               
71-392
               

               
Cow position:
               
chr15:11270149-11270486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
71-507
               

               
Cow position:
               
chr15:24044622-24045077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 322
               

               
Conread position:
               
72-238
               

               
Cow position:
               
chr15:2969019-2968852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
133, 107
               

               
Conread position:
               
72-246
               

               
Cow position:
               
chr15:1602458-1602631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 74
               

               
Conread position:
               
72-255
               

               
Cow position:
               
chr15:16666492-16666668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
72-321
               

               
Cow position:
               
chr15:23905226-23905477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
193, 35
               

               
Conread position:
               
72-383
               

               
Cow position:
               
chr15:6098303-6098630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
72-392
               

               
Cow position:
               
chr15:2796834-2797170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
72-392
               

               
Cow position:
               
chr15:44829479-44829817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
118, 11
               

               
Conread position:
               
72-432
               

               
Cow position:
               
chr15:37395202-37395575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
148, 331
               

               
Conread position:
               
72-547
               

               
Cow position:
               
chr15:20390821-20391292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 135
               

               
Conread position:
               
72-571
               

               
Cow position:
               
chr15:33976224-33976734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 340
               

               
Conread position:
               
72-593
               

               
Cow position:
               
chr15:21608262-21608791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 185
               

               
Conread position:
               
72-640
               

               
Cow position:
               
chr15:43626926-43626350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
73-546
               

               
Cow position:
               
chr15:14871208-14870727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
75-397
               

               
Cow position:
               
chr15:6082179-6082511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
186, 24
               

               
Conread position:
               
75-418
               

               
Cow position:
               
chr15:52778069-52778418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
88, 116
               

               
Conread position:
               
75-441
               

               
Cow position:
               
chr15:47274825-47274464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
180, 57
               

               
Conread position:
               
75-607
               

               
Cow position:
               
chr15:20472080-20472626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 285
               

               
Conread position:
               
75-608
               

               
Cow position:
               
chr15:28924301-28924841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 147
               

               
Conread position:
               
76-185
               

               
Cow position:
               
chr15:36258813-36258922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-203
               

               
Cow position:
               
chr15:12884461-12884334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-211
               

               
Cow position:
               
chr15:7941920-7942055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-235
               

               
Cow position:
               
chr15:33511309-33511150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-240
               

               
Cow position:
               
chr15:25907691-25907535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
140, 39
               

               
Conread position:
               
76-252
               

               
Cow position:
               
chr15:5692176-5692000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
169, 149
               

               
Conread position:
               
76-253
               

               
Cow position:
               
chr15:42536463-42536287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
76-259
               

               
Cow position:
               
chr15:33228552-33228373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
129, 21
               

               
Conread position:
               
76-281
               

               
Cow position:
               
chr15:608620-608426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
76-284
               

               
Cow position:
               
chr15:42529079-42528874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
76-326
               

               
Cow position:
               
chr15:32325785-32325524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
104, 156
               

               
Conread position:
               
76-358
               

               
Cow position:
               
chr15:6647913-6647618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
148, 238
               

               
Conread position:
               
76-358
               

               
Cow position:
               
chr15:13669440-13669731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 70
               

               
Conread position:
               
76-363
               

               
Cow position:
               
chr15:24821913-24822212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
76-365
               

               
Cow position:
               
chr15:23775496-23775786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 254
               

               
Conread position:
               
76-371
               

               
Cow position:
               
chr15:41087398-41087705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
179, 140
               

               
Conread position:
               
76-372
               

               
Cow position:
               
chr15:12836864-12837163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
185, 69
               

               
Conread position:
               
76-385
               

               
Cow position:
               
chr15:53342523-53342843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
10, 147
               

               
Conread position:
               
76-386
               

               
Cow position:
               
chr15:15040972-15041291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
139, 24
               

               
Conread position:
               
76-390
               

               
Cow position:
               
chr15:18781520-18781841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
185, 85
               

               
Conread position:
               
76-391
               

               
Cow position:
               
chr15:6163610-6163278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
19, 321
               

               
Conread position:
               
76-391
               

               
Cow position:
               
chr15:22759508-22759177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
76-391
               

               
Cow position:
               
chr15:34744268-34743943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
154, 159
               

               
Conread position:
               
76-392
               

               
Cow position:
               
chr15:14879536-14879866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
167, 229
               

               
Conread position:
               
76-392
               

               
Cow position:
               
chr15:31992991-31992663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
76-392
               

               
Cow position:
               
chr15:32647648-32647976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 95
               

               
Conread position:
               
76-392
               

               
Cow position:
               
chr15:32675388-32675060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 95
               

               
Conread position:
               
76-396
               

               
Cow position:
               
chr15:30985332-30985654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
225, 161
               

               
Conread position:
               
76-399
               

               
Cow position:
               
chr15:29792461-29792779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
180, 104
               

               
Conread position:
               
76-409
               

               
Cow position:
               
chr15:53481906-53481578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
185, 79
               

               
Conread position:
               
76-416
               

               
Cow position:
               
chr15:4603484-4603136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 84
               

               
Conread position:
               
76-426
               

               
Cow position:
               
chr15:45610368-45610734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
76-431
               

               
Cow position:
               
chr15:425922-426286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
6, 240
               

               
Conread position:
               
76-432
               

               
Cow position:
               
chr15:31949465-31949092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
181, 353
               

               
Conread position:
               
76-438
               

               
Cow position:
               
chr15:1301605-1301229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
181, 342
               

               
Conread position:
               
76-438
               

               
Cow position:
               
chr15:22095575-22095217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 96
               

               
Conread position:
               
76-440
               

               
Cow position:
               
chr15:23531188-23530810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
185, 146
               

               
Conread position:
               
76-518
               

               
Cow position:
               
chr15:33285336-33284889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
76-526
               

               
Cow position:
               
chr15:41360499-41360946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 115
               

               
Conread position:
               
76-540
               

               
Cow position:
               
chr15:5728103-5727645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
185, 246
               

               
Conread position:
               
76-552
               

               
Cow position:
               
chr15:13554805-13554332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
76-568
               

               
Cow position:
               
chr15:36392127-36391638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
180, 16
               

               
Conread position:
               
76-571
               

               
Cow position:
               
chr15:42415731-42415213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
108, 349
               

               
Conread position:
               
76-591
               

               
Cow position:
               
chr15:38162473-38161932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
185, 303
               

               
Conread position:
               
76-607
               

               
Cow position:
               
chr15:5234540-5235073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 146
               

               
Conread position:
               
76-607
               

               
Cow position:
               
chr15:22532699-22532171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
76-607
               

               
Cow position:
               
chr15:23798057-23798604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 103
               

               
Conread position:
               
76-626
               

               
Cow position:
               
chr15:39082664-39082114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 123
               

               
Conread position:
               
76-627
               

               
Cow position:
               
chr15:14505892-14505332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 317
               

               
Conread position:
               
76-638
               

               
Cow position:
               
chr15:6970442-6969873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 42
               

               
Conread position:
               
76-638
               

               
Cow position:
               
chr15:26078905-26079461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 287
               

               
Conread position:
               
76-644
               

               
Cow position:
               
chr15:25666750-25667352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
117, 303
               

               
Conread position:
               
77-361
               

               
Cow position:
               
chr15:21902979-21903278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 148
               

               
Conread position:
               
77-363
               

               
Cow position:
               
chr15:38683665-38683376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
7, 82
               

               
Conread position:
               
77-392
               

               
Cow position:
               
chr15:11363084-11363414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
143, 56
               

               
Conread position:
               
77-418
               

               
Cow position:
               
chr15:40065233-40065578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 268
               

               
Conread position:
               
77-438
               

               
Cow position:
               
chr15:24037946-24038309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 120
               

               
Conread position:
               
78-214
               

               
Cow position:
               
chr15:10284204-10284340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
78-254
               

               
Cow position:
               
chr15:53712146-53712321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
78-396
               

               
Cow position:
               
chr15:51822605-51822275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
78-431
               

               
Cow position:
               
chr15:18206055-18206414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 70
               

               
Conread position:
               
78-437
               

               
Cow position:
               
chr15:13431663-13432038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
14, 342
               

               
Conread position:
               
79-203
               

               
Cow position:
               
chr15:39406422-39406298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-209
               

               
Cow position:
               
chr15:33525938-33525811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
79-219
               

               
Cow position:
               
chr15:438907-438764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
79-219
               

               
Cow position:
               
chr15:7320062-7320202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr15:4770010-4770148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr15:21532633-21532492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr15:27711608-27711470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr15:44073953-44074094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr15:48297876-48297735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr15:53135255-53135114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-225
               

               
Cow position:
               
chr15:26933555-26933698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
79-226
               

               
Cow position:
               
chr15:7264578-7264725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-227
               

               
Cow position:
               
chr15:3652598-3652452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
79-228
               

               
Cow position:
               
chr15:18661991-18662139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
79-229
               

               
Cow position:
               
chr15:44635984-44636134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-229
               

               
Cow position:
               
chr15:53102151-53102001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-248
               

               
Cow position:
               
chr15:50568633-50568464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-249
               

               
Cow position:
               
chr15:36724664-36724831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 94
               

               
Conread position:
               
79-253
               

               
Cow position:
               
chr15:13791460-13791635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
79-253
               

               
Cow position:
               
chr15:49258533-49258360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
79-255
               

               
Cow position:
               
chr15:276205-276040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
79-255
               

               
Cow position:
               
chr15:16658785-16658615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
79-255
               

               
Cow position:
               
chr15:19858274-19858094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
79-266
               

               
Cow position:
               
chr15:10607592-10607777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
79-267
               

               
Cow position:
               
chr15:5913081-5912882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
93, 169
               

               
Conread position:
               
79-291
               

               
Cow position:
               
chr15:17477280-17477072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
79-300
               

               
Cow position:
               
chr15:5003446-5003209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 157
               

               
Conread position:
               
79-326
               

               
Cow position:
               
chr15:21152314-21152052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
79-351
               

               
Cow position:
               
chr15:18580404-18580691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
79-357
               

               
Cow position:
               
chr15:6550107-6549813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
79-357
               

               
Cow position:
               
chr15:8676700-8676994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
79-357
               

               
Cow position:
               
chr15:53130268-53129976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 155
               

               
Conread position:
               
79-364
               

               
Cow position:
               
chr15:9392858-9393150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
178, 79
               

               
Conread position:
               
79-364
               

               
Cow position:
               
chr15:18605843-18605555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
178, 93
               

               
Conread position:
               
79-364
               

               
Cow position:
               
chr15:23265096-23265381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
161, 100
               

               
Conread position:
               
79-364
               

               
Cow position:
               
chr15:39090724-39090437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 160
               

               
Conread position:
               
79-373
               

               
Cow position:
               
chr15:24568251-24567941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
79-374
               

               
Cow position:
               
chr15:31202467-31202155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
178, 120
               

               
Conread position:
               
79-380
               

               
Cow position:
               
chr15:33605378-33605072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
178, 46
               

               
Conread position:
               
79-389
               

               
Cow position:
               
chr15:5658624-5658301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 152
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr15:4642707-4643036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr15:4753914-4754221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
177, 82
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr15:6152123-6151798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
178, 27
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr15:6538441-6538763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
182, 291
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr15:12272050-12271722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
141, 169
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr15:12736723-12737045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
178, 215
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr15:19054711-19054384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr15:21913607-21913278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
147, 190
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr15:23716590-23716914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
182, 143
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr15:27747008-27746680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr15:38984181-38984510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
79-394
               

               
Cow position:
               
chr15:1128444-1128130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
152, 101
               

               
Conread position:
               
79-398
               

               
Cow position:
               
chr15:22168525-22168189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 319
               

               
Conread position:
               
79-399
               

               
Cow position:
               
chr15:38846549-38846234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
182, 78
               

               
Conread position:
               
79-403
               

               
Cow position:
               
chr15:5567860-5568199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
151, 66
               

               
Conread position:
               
79-403
               

               
Cow position:
               
chr15:7430444-7430103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
110, 90
               

               
Conread position:
               
79-403
               

               
Cow position:
               
chr15:30809799-30810132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
79-408
               

               
Cow position:
               
chr15:27123088-27123424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 282
               

               
Conread position:
               
79-416
               

               
Cow position:
               
chr15:4627808-4627455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
149, 314
               

               
Conread position:
               
79-418
               

               
Cow position:
               
chr15:4925651-4926009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
79-418
               

               
Cow position:
               
chr15:33681119-33680764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
106, 272
               

               
Conread position:
               
79-419
               

               
Cow position:
               
chr15:20117567-20117219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
172, 5
               

               
Conread position:
               
79-421
               

               
Cow position:
               
chr15:24285448-24285089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
111, 41
               

               
Conread position:
               
79-421
               

               
Cow position:
               
chr15:33625429-33625062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
53, 239
               

               
Conread position:
               
79-422
               

               
Cow position:
               
chr15:25825395-25825748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
105, 131
               

               
Conread position:
               
79-423
               

               
Cow position:
               
chr15:42534337-42534698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 333
               

               
Conread position:
               
79-425
               

               
Cow position:
               
chr15:15343603-15343240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
141, 231
               

               
Conread position:
               
79-426
               

               
Cow position:
               
chr15:4953921-4954265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
173, 109
               

               
Conread position:
               
79-429
               

               
Cow position:
               
chr15:38817950-38818295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
252, 76
               

               
Conread position:
               
79-431
               

               
Cow position:
               
chr15:37822848-37823215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
143, 331
               

               
Conread position:
               
79-433
               

               
Cow position:
               
chr15:34104728-34104371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 231
               

               
Conread position:
               
79-438
               

               
Cow position:
               
chr15:47634544-47634179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
79-438
               

               
Cow position:
               
chr15:50957331-50957707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
24, 235
               

               
Conread position:
               
79-440
               

               
Cow position:
               
chr15:46325102-46324731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
164, 72
               

               
Conread position:
               
79-445
               

               
Cow position:
               
chr15:15707657-15708028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 117
               

               
Conread position:
               
79-450
               

               
Cow position:
               
chr15:41583370-41582989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
46, 83
               

               
Conread position:
               
79-478
               

               
Cow position:
               
chr15:9870953-9871364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 99
               

               
Conread position:
               
79-505
               

               
Cow position:
               
chr15:26421140-26421573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
77, 72
               

               
Conread position:
               
79-509
               

               
Cow position:
               
chr15:21831962-21832415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 230
               

               
Conread position:
               
79-509
               

               
Cow position:
               
chr15:45479470-45479023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 307
               

               
Conread position:
               
79-528
               

               
Cow position:
               
chr15:18720776-18720316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 343
               

               
Conread position:
               
79-533
               

               
Cow position:
               
chr15:23567664-23568130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 83
               

               
Conread position:
               
79-545
               

               
Cow position:
               
chr15:47842806-47843266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
79-546
               

               
Cow position:
               
chr15:17233646-17233177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
175, 82
               

               
Conread position:
               
79-546
               

               
Cow position:
               
chr15:47822248-47821800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
79-547
               

               
Cow position:
               
chr15:20352301-20351815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 275
               

               
Conread position:
               
79-547
               

               
Cow position:
               
chr15:44641359-44640879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 138
               

               
Conread position:
               
79-552
               

               
Cow position:
               
chr15:7191800-7192283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 143
               

               
Conread position:
               
79-570
               

               
Cow position:
               
chr15:10737314-10737782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 109
               

               
Conread position:
               
79-570
               

               
Cow position:
               
chr15:16583250-16583730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 143
               

               
Conread position:
               
79-570
               

               
Cow position:
               
chr15:50302664-50302144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 348
               

               
Conread position:
               
79-571
               

               
Cow position:
               
chr15:6530376-6530891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 111
               

               
Conread position:
               
79-577
               

               
Cow position:
               
chr15:16616655-16616144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 87
               

               
Conread position:
               
79-590
               

               
Cow position:
               
chr15:20533988-20534518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 118
               

               
Conread position:
               
79-591
               

               
Cow position:
               
chr15:4788499-4789033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
100, 292
               

               
Conread position:
               
79-604
               

               
Cow position:
               
chr15:1082925-1083452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 105
               

               
Conread position:
               
79-607
               

               
Cow position:
               
chr15:1329644-1330191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 106
               

               
Conread position:
               
79-607
               

               
Cow position:
               
chr15:4138592-4138052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 60
               

               
Conread position:
               
79-607
               

               
Cow position:
               
chr15:17196607-17196063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 321
               

               
Conread position:
               
79-607
               

               
Cow position:
               
chr15:36435667-36435120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 62
               

               
Conread position:
               
79-607
               

               
Cow position:
               
chr15:42143312-42142791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
79-622
               

               
Cow position:
               
chr15:26911619-26912178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 142
               

               
Conread position:
               
79-628
               

               
Cow position:
               
chr15:50177558-50177010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
109, 100
               

               
Conread position:
               
79-638
               

               
Cow position:
               
chr15:40797972-40798539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
79-639
               

               
Cow position:
               
chr15:24968249-24967680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 193
               

               
Conread position:
               
79-639
               

               
Cow position:
               
chr15:46563016-46563589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 52
               

               
Conread position:
               
79-644
               

               
Cow position:
               
chr15:15881382-15880813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 27
               

               
Conread position:
               
80-251
               

               
Cow position:
               
chr15:52148679-52148508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
80-374
               

               
Cow position:
               
chr15:17034129-17033819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
80-607
               

               
Cow position:
               
chr15:2952688-2953215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
154, 87
               

               
Conread position:
               
80-643
               

               
Cow position:
               
chr15:20458839-20459431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 337
               

               
Conread position:
               
81-220
               

               
Cow position:
               
chr15:311990-311851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-220
               

               
Cow position:
               
chr15:5213483-5213344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-220
               

               
Cow position:
               
chr15:6960206-6960344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
81-228
               

               
Cow position:
               
chr15:4796456-4796309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-259
               

               
Cow position:
               
chr15:6464569-6464746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
81-315
               

               
Cow position:
               
chr15:4082493-4082743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-319
               

               
Cow position:
               
chr15:25463019-25462766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-320
               

               
Cow position:
               
chr15:7855084-7855339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
81-328
               

               
Cow position:
               
chr15:44863184-44863443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
81-330
               

               
Cow position:
               
chr15:21807358-21807623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 91
               

               
Conread position:
               
81-340
               

               
Cow position:
               
chr15:3720633-3720358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
81-372
               

               
Cow position:
               
chr15:1774954-1775261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-372
               

               
Cow position:
               
chr15:3275935-3275640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
180, 223
               

               
Conread position:
               
81-372
               

               
Cow position:
               
chr15:18215077-18215385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
81-384
               

               
Cow position:
               
chr15:12859650-12859967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
135, 61
               

               
Conread position:
               
81-388
               

               
Cow position:
               
chr15:6506197-6505896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
261, 103
               

               
Conread position:
               
81-388
               

               
Cow position:
               
chr15:12443035-12443355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
81-388
               

               
Cow position:
               
chr15:25164595-25164277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
136, 176
               

               
Conread position:
               
81-389
               

               
Cow position:
               
chr15:7389413-7389738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
81-391
               

               
Cow position:
               
chr15:20172203-20171876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr15:1653481-1653808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr15:3004727-3004400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr15:4139405-4139079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr15:4934108-4934427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
180, 239
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr15:6380409-6380079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 265
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr15:8576661-8576988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr15:11398771-11399098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
136, 262
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr15:22138047-22137720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr15:22545125-22544800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
135, 298
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr15:27934661-27934974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
180, 189
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr15:28486634-28486322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
141, 173
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr15:32262918-32263245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr15:34064453-34064780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr15:36146644-36146971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 92
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr15:42940689-42941018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
81-432
               

               
Cow position:
               
chr15:17073854-17073502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
135, 154
               

               
Conread position:
               
81-432
               

               
Cow position:
               
chr15:24088411-24088776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-433
               

               
Cow position:
               
chr15:5938885-5938519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
147, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr15:348827-349197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr15:692895-692526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
147, 294
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr15:2590901-2591270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr15:12399774-12399399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
135, 342
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr15:16345161-16344791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr15:18277955-18278329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr15:20752795-20753161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
135, 333
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr15:33258495-33258125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
146, 329
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr15:50323519-50323149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-570
               

               
Cow position:
               
chr15:10336211-10335716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 136
               

               
Conread position:
               
82-252
               

               
Cow position:
               
chr15:39831721-39831887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
82-284
               

               
Cow position:
               
chr15:12199567-12199767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
82-398
               

               
Cow position:
               
chr15:26735069-26734758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 7
               

               
Conread position:
               
82-419
               

               
Cow position:
               
chr15:11675177-11675531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 287
               

               
Conread position:
               
82-437
               

               
Cow position:
               
chr15:1251226-1250857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
134, 336
               

               
Conread position:
               
82-437
               

               
Cow position:
               
chr15:3724605-3724236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
134, 336
               

               
Conread position:
               
83-385
               

               
Cow position:
               
chr15:7980609-7980301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 257
               

               
Conread position:
               
84-236
               

               
Cow position:
               
chr15:27128411-27128563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
85-220
               

               
Cow position:
               
chr15:50183597-50183732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
85-348
               

               
Cow position:
               
chr15:1134750-1134476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
176, 157
               

               
Conread position:
               
85-390
               

               
Cow position:
               
chr15:18757254-18756955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
240, 158
               

               
Conread position:
               
85-437
               

               
Cow position:
               
chr15:22255435-22255801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
131, 333
               

               
Conread position:
               
85-437
               

               
Cow position:
               
chr15:22811981-22811615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
131, 333
               

               
Conread position:
               
85-644
               

               
Cow position:
               
chr15:6226741-6227303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
103, 139
               

               
Conread position:
               
86-348
               

               
Cow position:
               
chr15:1076451-1076725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
175, 224
               

               
Conread position:
               
86-371
               

               
Cow position:
               
chr15:9624331-9624029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
89-606
               

               
Cow position:
               
chr15:16543012-16543522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 200
               

               
Conread position:
               
90-330
               

               
Cow position:
               
chr15:18249741-18249997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
90-372
               

               
Cow position:
               
chr15:47892160-47892458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
72, 142
               

               
Conread position:
               
90-375
               

               
Cow position:
               
chr15:22099450-22099150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
90-407
               

               
Cow position:
               
chr15:49738596-49738924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 218
               

               
Conread position:
               
90-426
               

               
Cow position:
               
chr15:40546731-40547081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
90-437
               

               
Cow position:
               
chr15:4200157-4200518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
126, 328
               

               
Conread position:
               
90-570
               

               
Cow position:
               
chr15:20486756-20487243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 294
               

               
Conread position:
               
91-310
               

               
Cow position:
               
chr15:23865579-23865799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
148, 131
               

               
Conread position:
               
91-351
               

               
Cow position:
               
chr15:10232451-10232187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
170, 111
               

               
Conread position:
               
91-420
               

               
Cow position:
               
chr15:25110717-25111061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
157, 104
               

               
Conread position:
               
91-430
               

               
Cow position:
               
chr15:18715681-18715338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
103, 133
               

               
Conread position:
               
91-535
               

               
Cow position:
               
chr15:16640233-16639772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 131
               

               
Conread position:
               
91-570
               

               
Cow position:
               
chr15:47042175-47042669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 255
               

               
Conread position:
               
91-626
               

               
Cow position:
               
chr15:20390254-20390824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
166, 31
               

               
Conread position:
               
93-340
               

               
Cow position:
               
chr15:12259772-12259524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
163, 75
               

               
Conread position:
               
93-403
               

               
Cow position:
               
chr15:37485366-37485045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
168, 253
               

               
Conread position:
               
95-583
               

               
Cow position:
               
chr15:46868263-46868764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 431
               

               
Conread position:
               
97-258
               

               
Cow position:
               
chr15:3874151-3873995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
97-322
               

               
Cow position:
               
chr15:15645172-15644936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
98-337
               

               
Cow position:
               
chr15:22607250-22607002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
157, 217
               

               
Conread position:
               
102-255
               

               
Cow position:
               
chr15:10230828-10230982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
102-328
               

               
Cow position:
               
chr15:16425489-16425264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
102-334
               

               
Cow position:
               
chr15:37919296-37919065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
82, 89
               

               
Conread position:
               
102-368
               

               
Cow position:
               
chr15:18284681-18284398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
83, 121
               

               
Conread position:
               
102-375
               

               
Cow position:
               
chr15:34255304-34255589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
102-392
               

               
Cow position:
               
chr15:1056293-1055992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
155, 82
               

               
Conread position:
               
102-392
               

               
Cow position:
               
chr15:6385798-6385496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
102-430
               

               
Cow position:
               
chr15:8643709-8643368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
114, 316
               

               
Conread position:
               
102-431
               

               
Cow position:
               
chr15:27282228-27281899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
81, 132
               

               
Conread position:
               
102-445
               

               
Cow position:
               
chr15:23927051-23927388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
89, 147
               

               
Conread position:
               
102-518
               

               
Cow position:
               
chr15:25584641-25585078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
44, 265
               

               
Conread position:
               
102-519
               

               
Cow position:
               
chr15:13387519-13387088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
157, 20
               

               
Conread position:
               
102-619
               

               
Cow position:
               
chr15:28039191-28038695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 120
               

               
Conread position:
               
102-645
               

               
Cow position:
               
chr15:26896282-26896823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 80
               

               
Conread position:
               
103-328
               

               
Cow position:
               
chr15:40290055-40289817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
154, 70
               

               
Conread position:
               
103-441
               

               
Cow position:
               
chr15:36423087-36422748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
103-587
               

               
Cow position:
               
chr15:45245113-45245603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
105-514
               

               
Cow position:
               
chr15:5536185-5535775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
144, 121
               

               
Conread position:
               
106-418
               

               
Cow position:
               
chr15:47990327-47990656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
151, 217
               

               
Conread position:
               
106-426
               

               
Cow position:
               
chr15:32204472-32204798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
124, 55
               

               
Conread position:
               
106-442
               

               
Cow position:
               
chr15:53353121-53353460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
151, 21
               

               
Conread position:
               
106-607
               

               
Cow position:
               
chr15:44985-45508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
124, 60
               

               
Conread position:
               
107-229
               

               
Cow position:
               
chr15:11987127-11987005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
107-255
               

               
Cow position:
               
chr15:13113873-13114027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 118
               

               
Conread position:
               
107-355
               

               
Cow position:
               
chr15:237162-236902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
108-226
               

               
Cow position:
               
chr15:49413619-49413737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
108-370
               

               
Cow position:
               
chr15:9493865-9494137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
149, 73
               

               
Conread position:
               
108-398
               

               
Cow position:
               
chr15:27627391-27627692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
153, 69
               

               
Conread position:
               
108-415
               

               
Cow position:
               
chr15:47803960-47803646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
25, 260
               

               
Conread position:
               
108-438
               

               
Cow position:
               
chr15:22751881-22751545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 71
               

               
Conread position:
               
108-449
               

               
Cow position:
               
chr15:6331628-6331957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
162, 73
               

               
Conread position:
               
110-308
               

               
Cow position:
               
chr15:5931008-5930800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
110-607
               

               
Cow position:
               
chr15:30982345-30981870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 78
               

               
Conread position:
               
111-390
               

               
Cow position:
               
chr15:6806238-6806532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 7
               

               
Conread position:
               
111-644
               

               
Cow position:
               
chr15:3699854-3700403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 76
               

               
Conread position:
               
112-547
               

               
Cow position:
               
chr15:17869865-17870301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 146
               

               
Conread position:
               
112-591
               

               
Cow position:
               
chr15:39490222-39490727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
137, 319
               

               
Conread position:
               
114-326
               

               
Cow position:
               
chr15:45919812-45919587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
115-455
               

               
Cow position:
               
chr15:47105441-47105117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
115, 57
               

               
Conread position:
               
121-437
               

               
Cow position:
               
chr15:52380710-52380382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
140, 101
               

               
Conread position:
               
121-446
               

               
Cow position:
               
chr15:46611338-46611017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
140, 101
               

               
Conread position:
               
122-255
               

               
Cow position:
               
chr15:6508094-6507961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-362
               

               
Cow position:
               
chr15:26752598-26752837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 141
               

               
Conread position:
               
123-403
               

               
Cow position:
               
chr15:4485562-4485268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 282
               

               
Conread position:
               
124-372
               

               
Cow position:
               
chr15:20267057-20266793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
124-394
               

               
Cow position:
               
chr15:27281279-27281003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
137, 84
               

               
Conread position:
               
127-409
               

               
Cow position:
               
chr15:53102002-53101708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 261
               

               
Conread position:
               
127-510
               

               
Cow position:
               
chr15:53164433-53164041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
134, 98
               

               
Conread position:
               
127-569
               

               
Cow position:
               
chr15:52482415-52482865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
129-569
               

               
Cow position:
               
chr15:8578704-8579173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
130, 272
               

               
Conread position:
               
129-626
               

               
Cow position:
               
chr15:9648323-9648803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
130-358
               

               
Cow position:
               
chr15:4689592-4689827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
130-521
               

               
Cow position:
               
chr15:13515780-13515375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 92
               

               
Conread position:
               
131-422
               

               
Cow position:
               
chr15:53680361-53680655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
119, 14
               

               
Conread position:
               
132-455
               

               
Cow position:
               
chr15:23486764-23487092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 197
               

               
Conread position:
               
134-438
               

               
Cow position:
               
chr15:19781941-19781639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 66
               

               
Conread position:
               
134-546
               

               
Cow position:
               
chr15:17084616-17084193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 31
               

               
Conread position:
               
135-335
               

               
Cow position:
               
chr15:10450499-10450711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
135-590
               

               
Cow position:
               
chr15:23180825-23180380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
122, 21
               

               
Conread position:
               
135-591
               

               
Cow position:
               
chr15:8428411-8427943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
116, 151
               

               
Conread position:
               
136-570
               

               
Cow position:
               
chr15:22938931-22939365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
136-572
               

               
Cow position:
               
chr15:19186213-19186653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
125, 43
               

               
Conread position:
               
137-461
               

               
Cow position:
               
chr15:44256881-44256547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
120, 236
               

               
Conread position:
               
139-335
               

               
Cow position:
               
chr15:25618180-25618384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
122, 83
               

               
Conread position:
               
139-358
               

               
Cow position:
               
chr15:30316184-30316422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
141-398
               

               
Cow position:
               
chr15:8962397-8962141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
120, 38
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr15:5571236-5571518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
116, 213
               

               
Conread position:
               
142-570
               

               
Cow position:
               
chr15:42788764-42789186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 161
               

               
Conread position:
               
147-331
               

               
Cow position:
               
chr15:37238266-37238072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
152-426
               

               
Cow position:
               
chr15:28126660-28126946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
152-446
               

               
Cow position:
               
chr15:36621808-36621494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 160
               

               
Conread position:
               
157-364
               

               
Cow position:
               
chr15:6045931-6046151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
157-606
               

               
Cow position:
               
chr15:5420520-5420963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 28
               

               
Conread position:
               
158-518
               

               
Cow position:
               
chr15:38806116-38806490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
161-544
               

               
Cow position:
               
chr15:26404649-26404269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 205
               

               
Conread position:
               
161-547
               

               
Cow position:
               
chr15:16307796-16307405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 235
               

               
Conread position:
               
161-568
               

               
Cow position:
               
chr15:24941008-24941404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
100, 15
               

               
Conread position:
               
165-570
               

               
Cow position:
               
chr15:33303708-33303284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
167-441
               

               
Cow position:
               
chr15:8978774-8978497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 186
               

               
Conread position:
               
169-440
               

               
Cow position:
               
chr15:12316297-12316017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
173-438
               

               
Cow position:
               
chr15:20725249-20725524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
175-547
               

               
Cow position:
               
chr15:29340429-29340044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 202
               

               
Conread position:
               
175-637
               

               
Cow position:
               
chr15:44377624-44377161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
175-639
               

               
Cow position:
               
chr15:44051133-44051593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
178-567
               

               
Cow position:
               
chr15:16476380-16476765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
22, 184
               

               
Conread position:
               
178-611
               

               
Cow position:
               
chr15:1298100-1297658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
183-445
               

               
Cow position:
               
chr15:14856126-14856381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
183-516
               

               
Cow position:
               
chr15:51898582-51898242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 120
               

               
Conread position:
               
183-546
               

               
Cow position:
               
chr15:4093567-4093949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
183-639
               

               
Cow position:
               
chr15:21365842-21366313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
188-542
               

               
Cow position:
               
chr15:5730290-5729928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 147
               

               
Conread position:
               
188-552
               

               
Cow position:
               
chr15:12170591-12170223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
47, 185
               

               
Conread position:
               
188-642
               

               
Cow position:
               
chr15:34140333-34139867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
189-644
               

               
Cow position:
               
chr15:22532013-22531556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
190-396
               

               
Cow position:
               
chr15:5984255-5984459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
134, 74
               

               
Conread position:
               
190-418
               

               
Cow position:
               
chr15:50341459-50341232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
73, 32
               

               
Conread position:
               
190-510
               

               
Cow position:
               
chr15:23767914-23768237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
71, 206
               

               
Conread position:
               
190-518
               

               
Cow position:
               
chr15:51427472-51427817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 144
               

               
Conread position:
               
190-545
               

               
Cow position:
               
chr15:52611664-52611288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
191-386
               

               
Cow position:
               
chr15:33679044-33678844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
191-394
               

               
Cow position:
               
chr15:14020821-14020608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
66, 201
               

               
Conread position:
               
191-421
               

               
Cow position:
               
chr15:2210916-2210683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
191-446
               

               
Cow position:
               
chr15:40009300-40009569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
191-489
               

               
Cow position:
               
chr15:36781986-36782283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
191-538
               

               
Cow position:
               
chr15:4535257-4534903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
70, 271
               

               
Conread position:
               
191-607
               

               
Cow position:
               
chr15:11011259-11011675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 218
               

               
Conread position:
               
191-639
               

               
Cow position:
               
chr15:19771477-19771025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
17, 123
               

               
Conread position:
               
191-640
               

               
Cow position:
               
chr15:17100366-17100817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
191-643
               

               
Cow position:
               
chr15:286808-286360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
208, 65
               

               
Conread position:
               
191-647
               

               
Cow position:
               
chr15:24994178-24994636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
191-648
               

               
Cow position:
               
chr15:38883507-38883025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
7, 310
               

               
Conread position:
               
192-507
               

               
Cow position:
               
chr15:11658216-11658550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 260
               

               
Conread position:
               
192-607
               

               
Cow position:
               
chr15:35642369-35641930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 222
               

               
Conread position:
               
192-643
               

               
Cow position:
               
chr15:6462153-6462609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
69, 226
               

               
Conread position:
               
193-409
               

               
Cow position:
               
chr15:11362834-11363058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
193-566
               

               
Cow position:
               
chr15:40957927-40957549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 178
               

               
Conread position:
               
193-570
               

               
Cow position:
               
chr15:5683482-5683112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 90
               

               
Conread position:
               
194-511
               

               
Cow position:
               
chr15:41619839-41620171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
45, 241
               

               
Conread position:
               
194-552
               

               
Cow position:
               
chr15:22137030-22136669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 167
               

               
Conread position:
               
194-570
               

               
Cow position:
               
chr15:12723425-12723049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
194-590
               

               
Cow position:
               
chr15:39406081-39405677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
194-607
               

               
Cow position:
               
chr15:27972868-27973288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 221
               

               
Conread position:
               
195-449
               

               
Cow position:
               
chr15:6586367-6586635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
68, 201
               

               
Conread position:
               
197-420
               

               
Cow position:
               
chr15:10615397-10615623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
197-429
               

               
Cow position:
               
chr15:15215364-15215116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
197-430
               

               
Cow position:
               
chr15:3572360-3572603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
62, 172
               

               
Conread position:
               
198-421
               

               
Cow position:
               
chr15:37931426-37931655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
198-569
               

               
Cow position:
               
chr15:29604374-29604739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 167
               

               
Conread position:
               
198-608
               

               
Cow position:
               
chr15:21894125-21893697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
61, 291
               

               
Conread position:
               
199-420
               

               
Cow position:
               
chr15:39894920-39894695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
66, 152
               

               
Conread position:
               
200-570
               

               
Cow position:
               
chr15:39621679-39621300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
59, 359
               

               
Conread position:
               
201-420
               

               
Cow position:
               
chr15:17124707-17124926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
201-622
               

               
Cow position:
               
chr15:39599780-39599339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
60, 210
               

               
Conread position:
               
201-638
               

               
Cow position:
               
chr15:29810449-29810014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 133
               

               
Conread position:
               
203-640
               

               
Cow position:
               
chr15:22938439-22938880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
79, 168
               

               
Conread position:
               
205-438
               

               
Cow position:
               
chr15:21523126-21522879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
52, 211
               

               
Conread position:
               
206-544
               

               
Cow position:
               
chr15:31857927-31857577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 233
               

               
Conread position:
               
207-606
               

               
Cow position:
               
chr15:26158284-26158680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
208-590
               

               
Cow position:
               
chr15:21421274-21420878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
208-607
               

               
Cow position:
               
chr15:16823269-16822866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
209-538
               

               
Cow position:
               
chr15:24128352-24128023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 160
               

               
Conread position:
               
210-414
               

               
Cow position:
               
chr15:23332551-23332761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
212-446
               

               
Cow position:
               
chr15:11629553-11629801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
213-590
               

               
Cow position:
               
chr15:35112560-35112940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
69, 203
               

               
Conread position:
               
214-640
               

               
Cow position:
               
chr15:12304968-12304526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 350
               

               
Conread position:
               
214-647
               

               
Cow position:
               
chr15:17763226-17762785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
223-565
               

               
Cow position:
               
chr15:11995707-11996060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 191
               

               
Conread position:
               
223-644
               

               
Cow position:
               
chr15:39598556-39598125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 176
               

               
Conread position:
               
237-576
               

               
Cow position:
               
chr15:11559071-11559400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
244-544
               

               
Cow position:
               
chr15:23115132-23114820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
244-644
               

               
Cow position:
               
chr15:53036683-53037079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
246-539
               

               
Cow position:
               
chr15:26117789-26117515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
246-607
               

               
Cow position:
               
chr15:23696622-23696984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 170
               

               
Conread position:
               
257-451
               

               
Cow position:
               
chr15:20046570-20046379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 54
               

               
Conread position:
               
258-432
               

               
Cow position:
               
chr15:8610050-8610222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 154
               

               
Conread position:
               
258-432
               

               
Cow position:
               
chr15:19733633-19733459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
258-478
               

               
Cow position:
               
chr15:24305210-24305429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
145, 66
               

               
Conread position:
               
258-483
               

               
Cow position:
               
chr15:38103622-38103837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
258-490
               

               
Cow position:
               
chr15:38877035-38877263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 76
               

               
Conread position:
               
258-536
               

               
Cow position:
               
chr15:35417353-35417631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
258-547
               

               
Cow position:
               
chr15:49258145-49257847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
45, 131
               

               
Conread position:
               
258-552
               

               
Cow position:
               
chr15:2144862-2145159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 19
               

               
Conread position:
               
258-552
               

               
Cow position:
               
chr15:40999797-41000091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
134, 162
               

               
Conread position:
               
258-570
               

               
Cow position:
               
chr15:20082028-20081733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
231, 115
               

               
Conread position:
               
258-571
               

               
Cow position:
               
chr15:27900233-27900553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 113
               

               
Conread position:
               
258-605
               

               
Cow position:
               
chr15:16667231-16667578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
138, 101
               

               
Conread position:
               
258-606
               

               
Cow position:
               
chr15:21908205-21907862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 25
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr15:245042-244700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
133, 32
               

               
Conread position:
               
258-610
               

               
Cow position:
               
chr15:31137193-31137550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 154
               

               
Conread position:
               
258-627
               

               
Cow position:
               
chr15:50322863-50322496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 29
               

               
Conread position:
               
258-628
               

               
Cow position:
               
chr15:36773426-36773797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
66, 145
               

               
Conread position:
               
258-643
               

               
Cow position:
               
chr15:1722582-1722957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 26
               

               
Conread position:
               
258-644
               

               
Cow position:
               
chr15:26919006-26919389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
234, 70
               

               
Conread position:
               
258-648
               

               
Cow position:
               
chr15:1804060-1804463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
66, 147
               

               
Conread position:
               
258-648
               

               
Cow position:
               
chr15:30001958-30001573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
259-409
               

               
Cow position:
               
chr15:18322659-18322812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
259-573
               

               
Cow position:
               
chr15:275914-275613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
140, 99
               

               
Conread position:
               
259-627
               

               
Cow position:
               
chr15:33643357-33642990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 28
               

               
Conread position:
               
260-607
               

               
Cow position:
               
chr15:16261584-16261248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
5, 52
               

               
Conread position:
               
260-638
               

               
Cow position:
               
chr15:41125301-41125683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 152
               

               
Conread position:
               
261-399
               

               
Cow position:
               
chr15:17858969-17859106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
261-519
               

               
Cow position:
               
chr15:41225296-41225552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
137, 95
               

               
Conread position:
               
261-570
               

               
Cow position:
               
chr15:22871875-22871574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 140
               

               
Conread position:
               
261-639
               

               
Cow position:
               
chr15:36259336-36259709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
262-509
               

               
Cow position:
               
chr15:41045670-41045427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 93
               

               
Conread position:
               
262-518
               

               
Cow position:
               
chr15:43913820-43914083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 143
               

               
Conread position:
               
262-546
               

               
Cow position:
               
chr15:53045611-53045893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
141, 74
               

               
Conread position:
               
262-552
               

               
Cow position:
               
chr15:23598044-23598337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 139
               

               
Conread position:
               
262-571
               

               
Cow position:
               
chr15:608414-608103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 139
               

               
Conread position:
               
264-433
               

               
Cow position:
               
chr15:6168253-6168421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 117
               

               
Conread position:
               
266-438
               

               
Cow position:
               
chr15:16657757-16657584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 155
               

               
Conread position:
               
266-570
               

               
Cow position:
               
chr15:23275798-23275504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
221, 75
               

               
Conread position:
               
266-607
               

               
Cow position:
               
chr15:25907172-25906836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 67
               

               
Conread position:
               
266-607
               

               
Cow position:
               
chr15:44658621-44658284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 135
               

               
Conread position:
               
266-616
               

               
Cow position:
               
chr15:47843847-47844181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
226, 89
               

               
Conread position:
               
266-638
               

               
Cow position:
               
chr15:7456962-7456604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 171
               

               
Conread position:
               
269-640
               

               
Cow position:
               
chr15:36888084-36887724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
222, 92
               

               
Conread position:
               
274-605
               

               
Cow position:
               
chr15:4296020-4295679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
120, 96
               

               
Conread position:
               
274-606
               

               
Cow position:
               
chr15:26903449-26903112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
132, 33
               

               
Conread position:
               
274-626
               

               
Cow position:
               
chr15:6905317-6904990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
209, 61
               

               
Conread position:
               
274-636
               

               
Cow position:
               
chr15:18671192-18671560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
22, 258
               

               
Conread position:
               
274-640
               

               
Cow position:
               
chr15:49922396-49922021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 152
               

               
Conread position:
               
275-437
               

               
Cow position:
               
chr15:10845977-10845813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 129
               

               
Conread position:
               
275-642
               

               
Cow position:
               
chr15:22553291-22553658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
126, 32
               

               
Conread position:
               
276-443
               

               
Cow position:
               
chr15:5715806-5715639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 86
               

               
Conread position:
               
277-571
               

               
Cow position:
               
chr15:29331257-29330965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
6, 64
               

               
Conread position:
               
279-398
               

               
Cow position:
               
chr15:33770868-33770748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
279-439
               

               
Cow position:
               
chr15:34144904-34145062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 121
               

               
Conread position:
               
279-461
               

               
Cow position:
               
chr15:11646237-11646422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
279-569
               

               
Cow position:
               
chr15:10608055-10608344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
120, 133
               

               
Conread position:
               
279-569
               

               
Cow position:
               
chr15:12655661-12655954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
279-570
               

               
Cow position:
               
chr15:39316584-39316882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 101
               

               
Conread position:
               
279-607
               

               
Cow position:
               
chr15:23572428-23572771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
58, 101
               

               
Conread position:
               
279-639
               

               
Cow position:
               
chr15:225553-225915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 10
               

               
Conread position:
               
281-546
               

               
Cow position:
               
chr15:5726573-5726309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 136
               

               
Conread position:
               
281-644
               

               
Cow position:
               
chr15:30986040-30986404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
283-588
               

               
Cow position:
               
chr15:34897010-34896702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
284-535
               

               
Cow position:
               
chr15:3726364-3726119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
208, 43
               

               
Conread position:
               
284-607
               

               
Cow position:
               
chr15:8354289-8353959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 267
               

               
Conread position:
               
286-518
               

               
Cow position:
               
chr15:11560268-11560503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
287-551
               

               
Cow position:
               
chr15:37205287-37205028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
204, 101
               

               
Conread position:
               
289-570
               

               
Cow position:
               
chr15:22930099-22930388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 132
               

               
Conread position:
               
289-593
               

               
Cow position:
               
chr15:53716673-53716366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
111, 87
               

               
Conread position:
               
295-605
               

               
Cow position:
               
chr15:20422544-20422847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
33, 154
               

               
Conread position:
               
296-588
               

               
Cow position:
               
chr15:915612-915905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
297-644
               

               
Cow position:
               
chr15:36353901-36353548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 79
               

               
Conread position:
               
298-448
               

               
Cow position:
               
chr15:36724947-36725095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 108
               

               
Conread position:
               
300-611
               

               
Cow position:
               
chr15:17337588-17337284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
192, 102
               

               
Conread position:
               
301-587
               

               
Cow position:
               
chr15:9107265-9106979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
24, 225
               

               
Conread position:
               
305-448
               

               
Cow position:
               
chr15:23905708-23905851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
305-518
               

               
Cow position:
               
chr15:11987184-11987395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 98
               

               
Conread position:
               
305-607
               

               
Cow position:
               
chr15:2380581-2380283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
103, 170
               

               
Conread position:
               
305-644
               

               
Cow position:
               
chr15:49274176-49273845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 108
               

               
Conread position:
               
308-607
               

               
Cow position:
               
chr15:1503126-1502831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
309-607
               

               
Cow position:
               
chr15:10231521-10231825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
21, 248
               

               
Conread position:
               
312-574
               

               
Cow position:
               
chr15:30470752-30471015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
92, 238
               

               
Conread position:
               
314-648
               

               
Cow position:
               
chr15:51307464-51307801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
87, 204
               

               
Conread position:
               
317-644
               

               
Cow position:
               
chr15:39326299-39326629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 131
               

               
Conread position:
               
323-644
               

               
Cow position:
               
chr15:5158581-5158257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
169, 73
               

               
Conread position:
               
323-647
               

               
Cow position:
               
chr15:34284205-34284534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
169, 54
               

               
Conread position:
               
324-547
               

               
Cow position:
               
chr15:35425607-35425826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 78
               

               
Conread position:
               
325-588
               

               
Cow position:
               
chr15:31928694-31928960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
167, 49
               

               
Conread position:
               
330-640
               

               
Cow position:
               
chr15:49784091-49784390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
333-638
               

               
Cow position:
               
chr15:14888444-14888753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
69, 205
               

               
Conread position:
               
334-576
               

               
Cow position:
               
chr15:10563309-10563549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
69, 40
               

               
Conread position:
               
348-570
               

               
Cow position:
               
chr15:21821170-21820951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 135
               

               
Conread position:
               
357-566
               

               
Cow position:
               
chr15:10442331-10442537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 90
               

               
Conread position:
               
360-545
               

               
Cow position:
               
chr15:16908601-16908418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
362-626
               

               
Cow position:
               
chr15:41056037-41056313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
362-640
               

               
Cow position:
               
chr15:14988157-14987882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
368-616
               

               
Cow position:
               
chr15:26718759-26719003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
369-636
               

               
Cow position:
               
chr15:37284616-37284355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
377-570
               

               
Cow position:
               
chr15:25650268-25650448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
378-547
               

               
Cow position:
               
chr15:40415487-40415656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
378-549
               

               
Cow position:
               
chr15:22442121-22442296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
378-552
               

               
Cow position:
               
chr15:44237570-44237396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
113, 172
               

               
Conread position:
               
378-628
               

               
Cow position:
               
chr15:4694897-4694644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 161
               

               
Conread position:
               
379-571
               

               
Cow position:
               
chr15:40594351-40594546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
379-644
               

               
Cow position:
               
chr15:3695785-3695517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
391-607
               

               
Cow position:
               
chr15:47773351-47773562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
393-640
               

               
Cow position:
               
chr15:40835251-40835001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 217
               

               
Conread position:
               
405-607
               

               
Cow position:
               
chr15:27063396-27063600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
406-605
               

               
Cow position:
               
chr15:21903284-21903490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
407-643
               

               
Cow position:
               
chr15:50333105-50332857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
413-607
               

               
Cow position:
               
chr15:49132176-49131977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
419-606
               

               
Cow position:
               
chr15:26442327-26442133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
420-639
               

               
Cow position:
               
chr15:11908840-11909059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
131, 60
               

               
Conread position:
               
422-571
               

               
Cow position:
               
chr15:2389806-2389655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               
Show alignments to all cow chromosomes.