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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8009H15.5
        

               
Conread position:
               
35-432
               

               
Cow position:
               
chr17:5281016-5280617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
43-397
               

               
Cow position:
               
chr17:43717678-43717321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 166
               

               
Conread position:
               
44-421
               

               
Cow position:
               
chr17:10271136-10271516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
211, 18
               

               
Conread position:
               
45-420
               

               
Cow position:
               
chr17:25181512-25181123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
210, 124
               

               
Conread position:
               
47-437
               

               
Cow position:
               
chr17:8993652-8993250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
50-420
               

               
Cow position:
               
chr17:27698048-27697681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
215, 26
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr17:12929902-12929500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
207, 26
               

               
Conread position:
               
51-317
               

               
Cow position:
               
chr17:26771762-26772041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
51-326
               

               
Cow position:
               
chr17:5748159-5747867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
178, 15
               

               
Conread position:
               
51-420
               

               
Cow position:
               
chr17:11375051-11374677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 173
               

               
Conread position:
               
52-431
               

               
Cow position:
               
chr17:2006343-2006722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 149
               

               
Conread position:
               
54-255
               

               
Cow position:
               
chr17:7614999-7614805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
54-422
               

               
Cow position:
               
chr17:26084679-26085057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
55-436
               

               
Cow position:
               
chr17:242285-242673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 37
               

               
Conread position:
               
55-455
               

               
Cow position:
               
chr17:13237080-13236668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 110
               

               
Conread position:
               
56-254
               

               
Cow position:
               
chr17:18764425-18764227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-260
               

               
Cow position:
               
chr17:19900128-19900334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 112
               

               
Conread position:
               
56-260
               

               
Cow position:
               
chr17:26762355-26762151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
57-179
               

               
Cow position:
               
chr17:6848539-6848662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
57-253
               

               
Cow position:
               
chr17:1456590-1456392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
57-398
               

               
Cow position:
               
chr17:7560032-7559671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
57-403
               

               
Cow position:
               
chr17:6155685-6156044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 324
               

               
Conread position:
               
57-404
               

               
Cow position:
               
chr17:8926582-8926212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
124, 297
               

               
Conread position:
               
57-420
               

               
Cow position:
               
chr17:23880180-23879805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
57-459
               

               
Cow position:
               
chr17:32457934-32457507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
200, 401
               

               
Conread position:
               
57-542
               

               
Cow position:
               
chr17:3042138-3042617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
57-546
               

               
Cow position:
               
chr17:39857063-39857531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
57-552
               

               
Cow position:
               
chr17:24580636-24580144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
57-552
               

               
Cow position:
               
chr17:41029597-41030088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 340
               

               
Conread position:
               
57-573
               

               
Cow position:
               
chr17:40393675-40394179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
57-607
               

               
Cow position:
               
chr17:40771476-40772042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 9
               

               
Conread position:
               
57-644
               

               
Cow position:
               
chr17:29292723-29292142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
58-364
               

               
Cow position:
               
chr17:18569250-18568955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 115
               

               
Conread position:
               
58-365
               

               
Cow position:
               
chr17:33370567-33370250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 280
               

               
Conread position:
               
58-420
               

               
Cow position:
               
chr17:25590580-25590214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
58-420
               

               
Cow position:
               
chr17:25755428-25755814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
58-423
               

               
Cow position:
               
chr17:30204303-30204680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
58-431
               

               
Cow position:
               
chr17:23803113-23803491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 191
               

               
Conread position:
               
58-443
               

               
Cow position:
               
chr17:25740593-25740997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
59-329
               

               
Cow position:
               
chr17:2270416-2270685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
209, 197
               

               
Conread position:
               
59-389
               

               
Cow position:
               
chr17:14231903-14231564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
161, 7
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr17:5553815-5553473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
200, 12
               

               
Conread position:
               
59-397
               

               
Cow position:
               
chr17:34628840-34628482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
59-438
               

               
Cow position:
               
chr17:5255727-5255336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
59-448
               

               
Cow position:
               
chr17:3138931-3138547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
220, 166
               

               
Conread position:
               
60-170
               

               
Cow position:
               
chr17:24334336-24334446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
60-253
               

               
Cow position:
               
chr17:22135148-22135337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
60-335
               

               
Cow position:
               
chr17:40405956-40406243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 112
               

               
Conread position:
               
60-399
               

               
Cow position:
               
chr17:27667545-27667188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
60-421
               

               
Cow position:
               
chr17:5896264-5895890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
17, 160
               

               
Conread position:
               
60-440
               

               
Cow position:
               
chr17:21182197-21182591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
60-593
               

               
Cow position:
               
chr17:20800465-20801014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 248
               

               
Conread position:
               
60-606
               

               
Cow position:
               
chr17:21960029-21959472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 86
               

               
Conread position:
               
60-607
               

               
Cow position:
               
chr17:3388509-3389046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
60-607
               

               
Cow position:
               
chr17:13940671-13940106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
60-639
               

               
Cow position:
               
chr17:33934097-33933506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 258
               

               
Conread position:
               
61-242
               

               
Cow position:
               
chr17:24946904-24946725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
61-438
               

               
Cow position:
               
chr17:19998786-19999174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
185, 57
               

               
Conread position:
               
61-546
               

               
Cow position:
               
chr17:21293400-21292902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 336
               

               
Conread position:
               
61-590
               

               
Cow position:
               
chr17:1493506-1492951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 248
               

               
Conread position:
               
62-313
               

               
Cow position:
               
chr17:16463465-16463198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
62-326
               

               
Cow position:
               
chr17:26532519-26532795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
62-384
               

               
Cow position:
               
chr17:2151842-2152170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
62-413
               

               
Cow position:
               
chr17:15985007-15985364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
62-430
               

               
Cow position:
               
chr17:25145659-25145289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
154, 236
               

               
Conread position:
               
62-506
               

               
Cow position:
               
chr17:25542163-25541711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 172
               

               
Conread position:
               
62-573
               

               
Cow position:
               
chr17:34595593-34596111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
63-255
               

               
Cow position:
               
chr17:38829734-38829927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
13, 109
               

               
Conread position:
               
63-322
               

               
Cow position:
               
chr17:23517516-23517246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 160
               

               
Conread position:
               
63-392
               

               
Cow position:
               
chr17:17493991-17494338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
64-205
               

               
Cow position:
               
chr17:32977545-32977404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
64-431
               

               
Cow position:
               
chr17:11386167-11386550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
10, 159
               

               
Conread position:
               
64-445
               

               
Cow position:
               
chr17:27305816-27306204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 121
               

               
Conread position:
               
64-486
               

               
Cow position:
               
chr17:15334070-15333625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 163
               

               
Conread position:
               
64-545
               

               
Cow position:
               
chr17:18592088-18592587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 313
               

               
Conread position:
               
64-566
               

               
Cow position:
               
chr17:1061404-1060877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
64-570
               

               
Cow position:
               
chr17:1410593-1410069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 163
               

               
Conread position:
               
64-570
               

               
Cow position:
               
chr17:32138746-32138253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
64-644
               

               
Cow position:
               
chr17:32989144-32989722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 161
               

               
Conread position:
               
64-644
               

               
Cow position:
               
chr17:32993962-32993378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 161
               

               
Conread position:
               
65-253
               

               
Cow position:
               
chr17:20858385-20858198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
66-262
               

               
Cow position:
               
chr17:18266715-18266912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
8, 93
               

               
Conread position:
               
66-346
               

               
Cow position:
               
chr17:1710047-1710333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
30, 153
               

               
Conread position:
               
66-374
               

               
Cow position:
               
chr17:9176030-9175714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
66-380
               

               
Cow position:
               
chr17:3131714-3132037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
66-388
               

               
Cow position:
               
chr17:15854443-15854782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 270
               

               
Conread position:
               
66-388
               

               
Cow position:
               
chr17:36499925-36499589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 193
               

               
Conread position:
               
66-392
               

               
Cow position:
               
chr17:8673762-8674091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
66-396
               

               
Cow position:
               
chr17:11382062-11381721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
9, 129
               

               
Conread position:
               
66-417
               

               
Cow position:
               
chr17:30539595-30539237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 259
               

               
Conread position:
               
66-418
               

               
Cow position:
               
chr17:31232287-31231911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
8, 244
               

               
Conread position:
               
66-437
               

               
Cow position:
               
chr17:3743867-3744254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
23, 354
               

               
Conread position:
               
66-437
               

               
Cow position:
               
chr17:19370754-19370367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 354
               

               
Conread position:
               
66-437
               

               
Cow position:
               
chr17:36413331-36412944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 354
               

               
Conread position:
               
66-445
               

               
Cow position:
               
chr17:15188419-15188031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
152, 19
               

               
Conread position:
               
66-516
               

               
Cow position:
               
chr17:5730578-5731032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 157
               

               
Conread position:
               
66-518
               

               
Cow position:
               
chr17:11035575-11036030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
9, 106
               

               
Conread position:
               
66-607
               

               
Cow position:
               
chr17:13922133-13922694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 117
               

               
Conread position:
               
67-219
               

               
Cow position:
               
chr17:1537017-1537171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-220
               

               
Cow position:
               
chr17:6072232-6072387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr17:9818236-9818076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr17:15118521-15118681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr17:15894653-15894493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr17:16876059-16876219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr17:31077035-31077195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-226
               

               
Cow position:
               
chr17:43992189-43992350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-264
               

               
Cow position:
               
chr17:31671195-31670996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-268
               

               
Cow position:
               
chr17:20271702-20271498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
22, 171
               

               
Conread position:
               
67-303
               

               
Cow position:
               
chr17:5638187-5637934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-313
               

               
Cow position:
               
chr17:23320717-23320457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-326
               

               
Cow position:
               
chr17:77061-76785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-326
               

               
Cow position:
               
chr17:42026190-42026466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-331
               

               
Cow position:
               
chr17:12657988-12657707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
22, 233
               

               
Conread position:
               
67-350
               

               
Cow position:
               
chr17:15318996-15319297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-357
               

               
Cow position:
               
chr17:19377446-19377138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-370
               

               
Cow position:
               
chr17:28155654-28155333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-372
               

               
Cow position:
               
chr17:399910-399587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-388
               

               
Cow position:
               
chr17:5281646-5281308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr17:148613-148954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr17:184851-185173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 218
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr17:2265893-2266236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr17:8213942-8214285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr17:10254601-10254944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr17:14021765-14021426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr17:21926364-21926699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 322
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr17:22248548-22248205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr17:24095059-24094716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr17:27791090-27790747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr17:28024187-28023844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr17:31986496-31986153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr17:34235545-34235202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 314
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr17:43539708-43540051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-393
               

               
Cow position:
               
chr17:25844393-25844739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-422
               

               
Cow position:
               
chr17:43725858-43725487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
22, 316
               

               
Conread position:
               
67-423
               

               
Cow position:
               
chr17:20987946-20987574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
67-431
               

               
Cow position:
               
chr17:6956344-6956726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr17:5548846-5548465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr17:9914262-9914643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr17:10008910-10008529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr17:19317618-19317999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr17:20391479-20391860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr17:21660061-21659685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 348
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr17:33058904-33058524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 352
               

               
Conread position:
               
67-433
               

               
Cow position:
               
chr17:34191278-34190886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 297
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:5541917-5541531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 341
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:5809952-5809566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:6145464-6145850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:6612727-6613113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:7585124-7585507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:10354408-10354022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:11677532-11677146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:11786628-11787014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:12856956-12857342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 354
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:14239781-14239395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 345
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:16505041-16504658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 233
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:16699772-16699392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 347
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:16874289-16874675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:17259932-17260318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:18564105-18563722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 278
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:20226306-20226689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
158, 350
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:20232077-20231691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:21212383-21211997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:21439537-21439923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:21716491-21716105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:25195397-25195783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:27863812-27864198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:30225105-30224719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:31532015-31532400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:34565051-34565437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr17:39823489-39823103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-547
               

               
Cow position:
               
chr17:25835122-25835604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-553
               

               
Cow position:
               
chr17:9564966-9565452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 81
               

               
Conread position:
               
69-437
               

               
Cow position:
               
chr17:22087324-22087705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
69-437
               

               
Cow position:
               
chr17:36284969-36285352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
14, 350
               

               
Conread position:
               
70-381
               

               
Cow position:
               
chr17:15893563-15893887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
147, 108
               

               
Conread position:
               
72-364
               

               
Cow position:
               
chr17:4213418-4213724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
185, 140
               

               
Conread position:
               
72-392
               

               
Cow position:
               
chr17:6123495-6123831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
72-419
               

               
Cow position:
               
chr17:21363072-21363425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
72-437
               

               
Cow position:
               
chr17:10025739-10025360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
144, 346
               

               
Conread position:
               
72-437
               

               
Cow position:
               
chr17:27986175-27985796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
155, 346
               

               
Conread position:
               
72-607
               

               
Cow position:
               
chr17:11397331-11397879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 136
               

               
Conread position:
               
72-617
               

               
Cow position:
               
chr17:12289758-12289186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 282
               

               
Conread position:
               
73-616
               

               
Cow position:
               
chr17:24823926-24824469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
74-409
               

               
Cow position:
               
chr17:21680431-21680775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
183, 271
               

               
Conread position:
               
74-607
               

               
Cow position:
               
chr17:15664333-15664888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
75-432
               

               
Cow position:
               
chr17:20780183-20780540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
182, 40
               

               
Conread position:
               
75-644
               

               
Cow position:
               
chr17:14050528-14049945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
211, 130
               

               
Conread position:
               
75-644
               

               
Cow position:
               
chr17:32027798-32027200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 389
               

               
Conread position:
               
76-255
               

               
Cow position:
               
chr17:31798468-31798658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
76-262
               

               
Cow position:
               
chr17:4107351-4107168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
178, 58
               

               
Conread position:
               
76-262
               

               
Cow position:
               
chr17:4123087-4122903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
178, 58
               

               
Conread position:
               
76-266
               

               
Cow position:
               
chr17:14249368-14249169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
142, 191
               

               
Conread position:
               
76-311
               

               
Cow position:
               
chr17:40701336-40701586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
76-321
               

               
Cow position:
               
chr17:17983109-17982856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
22, 137
               

               
Conread position:
               
76-322
               

               
Cow position:
               
chr17:22057508-22057251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
76-335
               

               
Cow position:
               
chr17:40802477-40802738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
185, 198
               

               
Conread position:
               
76-337
               

               
Cow position:
               
chr17:6082212-6082471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
185, 28
               

               
Conread position:
               
76-350
               

               
Cow position:
               
chr17:8644702-8644990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
76-356
               

               
Cow position:
               
chr17:21038946-21039235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 23
               

               
Conread position:
               
76-359
               

               
Cow position:
               
chr17:14265888-14265594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
181, 23
               

               
Conread position:
               
76-362
               

               
Cow position:
               
chr17:20358544-20358838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
130, 27
               

               
Conread position:
               
76-371
               

               
Cow position:
               
chr17:20129343-20129638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 47
               

               
Conread position:
               
76-375
               

               
Cow position:
               
chr17:16117766-16117447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
76-380
               

               
Cow position:
               
chr17:9897582-9897888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
140, 112
               

               
Conread position:
               
76-392
               

               
Cow position:
               
chr17:31158-31490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-394
               

               
Cow position:
               
chr17:34317052-34316714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
94, 155
               

               
Conread position:
               
76-407
               

               
Cow position:
               
chr17:1708038-1707695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
76-409
               

               
Cow position:
               
chr17:44924510-44924177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
185, 221
               

               
Conread position:
               
76-419
               

               
Cow position:
               
chr17:5745594-5745232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
76-420
               

               
Cow position:
               
chr17:20233892-20234249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 249
               

               
Conread position:
               
76-422
               

               
Cow position:
               
chr17:24549834-24550198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 147
               

               
Conread position:
               
76-432
               

               
Cow position:
               
chr17:12357248-12356880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
146, 224
               

               
Conread position:
               
76-432
               

               
Cow position:
               
chr17:26771689-26771326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
185, 344
               

               
Conread position:
               
76-438
               

               
Cow position:
               
chr17:26514380-26514753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 313
               

               
Conread position:
               
76-445
               

               
Cow position:
               
chr17:15300199-15299828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
185, 95
               

               
Conread position:
               
76-450
               

               
Cow position:
               
chr17:21495042-21495427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 145
               

               
Conread position:
               
76-461
               

               
Cow position:
               
chr17:5695277-5694891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
184, 112
               

               
Conread position:
               
76-515
               

               
Cow position:
               
chr17:3781700-3782158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 321
               

               
Conread position:
               
76-547
               

               
Cow position:
               
chr17:3683992-3683524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 146
               

               
Conread position:
               
76-552
               

               
Cow position:
               
chr17:26764682-26765175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 103
               

               
Conread position:
               
76-566
               

               
Cow position:
               
chr17:24553670-24554161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 27
               

               
Conread position:
               
76-580
               

               
Cow position:
               
chr17:15103214-15102712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 20
               

               
Conread position:
               
76-605
               

               
Cow position:
               
chr17:29083871-29084380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 144
               

               
Conread position:
               
76-607
               

               
Cow position:
               
chr17:4601877-4601349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 24
               

               
Conread position:
               
76-607
               

               
Cow position:
               
chr17:23101542-23101010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 96
               

               
Conread position:
               
76-607
               

               
Cow position:
               
chr17:25815273-25815807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 266
               

               
Conread position:
               
76-611
               

               
Cow position:
               
chr17:14003494-14004034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 221
               

               
Conread position:
               
76-638
               

               
Cow position:
               
chr17:5767566-5768140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 31
               

               
Conread position:
               
76-638
               

               
Cow position:
               
chr17:24077071-24077643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 111
               

               
Conread position:
               
76-643
               

               
Cow position:
               
chr17:29715521-29714965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 276
               

               
Conread position:
               
76-643
               

               
Cow position:
               
chr17:33288989-33288412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 271
               

               
Conread position:
               
77-416
               

               
Cow position:
               
chr17:3139502-3139857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 276
               

               
Conread position:
               
77-426
               

               
Cow position:
               
chr17:18036321-18035955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
186, 120
               

               
Conread position:
               
77-443
               

               
Cow position:
               
chr17:35287677-35287294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
143, 305
               

               
Conread position:
               
78-255
               

               
Cow position:
               
chr17:42258573-42258751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
78-291
               

               
Cow position:
               
chr17:25344273-25344059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
190, 179
               

               
Conread position:
               
78-310
               

               
Cow position:
               
chr17:11913033-11912790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
78-351
               

               
Cow position:
               
chr17:1482017-1482304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 85
               

               
Conread position:
               
78-388
               

               
Cow position:
               
chr17:17179706-17180017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
6, 128
               

               
Conread position:
               
78-459
               

               
Cow position:
               
chr17:5733764-5733410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
231, 10
               

               
Conread position:
               
78-607
               

               
Cow position:
               
chr17:11216213-11215681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 94
               

               
Conread position:
               
79-228
               

               
Cow position:
               
chr17:17266679-17266531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
79-250
               

               
Cow position:
               
chr17:34208447-34208277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
79-253
               

               
Cow position:
               
chr17:30727942-30728112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
79-257
               

               
Cow position:
               
chr17:21807140-21806956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
79-313
               

               
Cow position:
               
chr17:11638554-11638788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
171, 134
               

               
Conread position:
               
79-325
               

               
Cow position:
               
chr17:3154101-3153843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
177, 93
               

               
Conread position:
               
79-325
               

               
Cow position:
               
chr17:9748437-9748689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
79-330
               

               
Cow position:
               
chr17:9663036-9662767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
79-340
               

               
Cow position:
               
chr17:22773663-22773401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
145, 18
               

               
Conread position:
               
79-341
               

               
Cow position:
               
chr17:20269280-20269543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
160, 179
               

               
Conread position:
               
79-346
               

               
Cow position:
               
chr17:28130372-28130096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
139, 102
               

               
Conread position:
               
79-357
               

               
Cow position:
               
chr17:18312175-18312468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
79-360
               

               
Cow position:
               
chr17:10512221-10511925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
79-370
               

               
Cow position:
               
chr17:3386965-3387258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 93
               

               
Conread position:
               
79-375
               

               
Cow position:
               
chr17:43527651-43527953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
79-383
               

               
Cow position:
               
chr17:21707334-21707029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
131, 267
               

               
Conread position:
               
79-384
               

               
Cow position:
               
chr17:3498996-3498679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 239
               

               
Conread position:
               
79-388
               

               
Cow position:
               
chr17:11471575-11471897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
149, 17
               

               
Conread position:
               
79-389
               

               
Cow position:
               
chr17:25947136-25946810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
141, 223
               

               
Conread position:
               
79-390
               

               
Cow position:
               
chr17:25167981-25168309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 141
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr17:3196918-3196597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
149, 231
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr17:6263576-6263905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr17:6858724-6858395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr17:13725980-13726306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
109, 297
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr17:23337346-23337024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
137, 230
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr17:24026266-24025929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr17:29276900-29277224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
182, 312
               

               
Conread position:
               
79-394
               

               
Cow position:
               
chr17:6566147-6566460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
182, 76
               

               
Conread position:
               
79-397
               

               
Cow position:
               
chr17:13409684-13409360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
171, 81
               

               
Conread position:
               
79-399
               

               
Cow position:
               
chr17:3843159-3843479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
6, 94
               

               
Conread position:
               
79-400
               

               
Cow position:
               
chr17:25608838-25608501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
177, 322
               

               
Conread position:
               
79-411
               

               
Cow position:
               
chr17:19455626-19455299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
193, 49
               

               
Conread position:
               
79-411
               

               
Cow position:
               
chr17:20083844-20083509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 236
               

               
Conread position:
               
79-415
               

               
Cow position:
               
chr17:20006224-20006576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
79-418
               

               
Cow position:
               
chr17:10649517-10649860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 302
               

               
Conread position:
               
79-418
               

               
Cow position:
               
chr17:18099369-18099018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
149, 18
               

               
Conread position:
               
79-418
               

               
Cow position:
               
chr17:34390893-34390541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
138, 341
               

               
Conread position:
               
79-418
               

               
Cow position:
               
chr17:37342805-37342466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
167, 107
               

               
Conread position:
               
79-419
               

               
Cow position:
               
chr17:36504359-36504009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
158, 218
               

               
Conread position:
               
79-421
               

               
Cow position:
               
chr17:13144014-13143670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 103
               

               
Conread position:
               
79-421
               

               
Cow position:
               
chr17:26182890-26183244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
79-423
               

               
Cow position:
               
chr17:139334-139690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
138, 81
               

               
Conread position:
               
79-423
               

               
Cow position:
               
chr17:15328997-15329357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
79-423
               

               
Cow position:
               
chr17:16854389-16854030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
149, 55
               

               
Conread position:
               
79-423
               

               
Cow position:
               
chr17:19266738-19266382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
79-425
               

               
Cow position:
               
chr17:24503518-24503879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
182, 31
               

               
Conread position:
               
79-426
               

               
Cow position:
               
chr17:20653233-20652873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
87, 264
               

               
Conread position:
               
79-432
               

               
Cow position:
               
chr17:8223422-8223789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
149, 126
               

               
Conread position:
               
79-432
               

               
Cow position:
               
chr17:14212302-14211934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 340
               

               
Conread position:
               
79-432
               

               
Cow position:
               
chr17:20361532-20361896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
138, 43
               

               
Conread position:
               
79-432
               

               
Cow position:
               
chr17:27679576-27679206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 323
               

               
Conread position:
               
79-433
               

               
Cow position:
               
chr17:25077157-25076788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
182, 300
               

               
Conread position:
               
79-437
               

               
Cow position:
               
chr17:1970872-1971245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
149, 340
               

               
Conread position:
               
79-438
               

               
Cow position:
               
chr17:484297-484635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
313, 141
               

               
Conread position:
               
79-442
               

               
Cow position:
               
chr17:35233773-35234145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
151, 91
               

               
Conread position:
               
79-446
               

               
Cow position:
               
chr17:12059425-12059047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
104, 76
               

               
Conread position:
               
79-446
               

               
Cow position:
               
chr17:32651284-32651663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 317
               

               
Conread position:
               
79-490
               

               
Cow position:
               
chr17:2034219-2034618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
200, 24
               

               
Conread position:
               
79-507
               

               
Cow position:
               
chr17:18861050-18860614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 102
               

               
Conread position:
               
79-516
               

               
Cow position:
               
chr17:28539711-28540144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 65
               

               
Conread position:
               
79-545
               

               
Cow position:
               
chr17:8690783-8690307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 39
               

               
Conread position:
               
79-546
               

               
Cow position:
               
chr17:16446763-16446291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 291
               

               
Conread position:
               
79-546
               

               
Cow position:
               
chr17:21336029-21335546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 66
               

               
Conread position:
               
79-546
               

               
Cow position:
               
chr17:25188951-25189431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 93
               

               
Conread position:
               
79-546
               

               
Cow position:
               
chr17:26230607-26231100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
106, 144
               

               
Conread position:
               
79-547
               

               
Cow position:
               
chr17:17061004-17060536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
145, 70
               

               
Conread position:
               
79-570
               

               
Cow position:
               
chr17:14033979-14033472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 299
               

               
Conread position:
               
79-570
               

               
Cow position:
               
chr17:20993372-20992873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 391
               

               
Conread position:
               
79-570
               

               
Cow position:
               
chr17:22563863-22564354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
79-571
               

               
Cow position:
               
chr17:24752607-24752159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
203, 77
               

               
Conread position:
               
79-571
               

               
Cow position:
               
chr17:32365954-32366466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 132
               

               
Conread position:
               
79-571
               

               
Cow position:
               
chr17:40289332-40288828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 93
               

               
Conread position:
               
79-572
               

               
Cow position:
               
chr17:979466-978997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 147
               

               
Conread position:
               
79-606
               

               
Cow position:
               
chr17:11102115-11101607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 69
               

               
Conread position:
               
79-606
               

               
Cow position:
               
chr17:17222013-17222555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 67
               

               
Conread position:
               
79-607
               

               
Cow position:
               
chr17:11618248-11618799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 248
               

               
Conread position:
               
79-607
               

               
Cow position:
               
chr17:18490203-18490745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 104
               

               
Conread position:
               
79-607
               

               
Cow position:
               
chr17:20033245-20032696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 70
               

               
Conread position:
               
79-607
               

               
Cow position:
               
chr17:20848204-20848736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 59
               

               
Conread position:
               
79-607
               

               
Cow position:
               
chr17:22775059-22775582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
79-638
               

               
Cow position:
               
chr17:18201445-18202002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 93
               

               
Conread position:
               
79-640
               

               
Cow position:
               
chr17:923548-924107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 146
               

               
Conread position:
               
79-644
               

               
Cow position:
               
chr17:9853654-9854230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 284
               

               
Conread position:
               
79-646
               

               
Cow position:
               
chr17:20093456-20092879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
142, 225
               

               
Conread position:
               
79-648
               

               
Cow position:
               
chr17:24883895-24883316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 65
               

               
Conread position:
               
80-259
               

               
Cow position:
               
chr17:2730129-2729949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
80-552
               

               
Cow position:
               
chr17:30718747-30718267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 99
               

               
Conread position:
               
80-571
               

               
Cow position:
               
chr17:11839370-11839893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 131
               

               
Conread position:
               
81-225
               

               
Cow position:
               
chr17:19925405-19925262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
81-225
               

               
Cow position:
               
chr17:26870595-26870451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-251
               

               
Cow position:
               
chr17:34779724-34779894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-313
               

               
Cow position:
               
chr17:24978779-24979026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-329
               

               
Cow position:
               
chr17:26829025-26828760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
81-330
               

               
Cow position:
               
chr17:20546858-20547123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
81-357
               

               
Cow position:
               
chr17:42843722-42844014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-388
               

               
Cow position:
               
chr17:7396573-7396248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
81-389
               

               
Cow position:
               
chr17:19214689-19214366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
147, 204
               

               
Conread position:
               
81-391
               

               
Cow position:
               
chr17:4152553-4152227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-391
               

               
Cow position:
               
chr17:36197291-36197617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr17:15439510-15439837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr17:34005567-34005244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
135, 154
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr17:35437764-35438091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
99, 91
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr17:42398105-42398428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
135, 267
               

               
Conread position:
               
81-409
               

               
Cow position:
               
chr17:37528027-37527683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-423
               

               
Cow position:
               
chr17:26822765-26823122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
151, 329
               

               
Conread position:
               
81-431
               

               
Cow position:
               
chr17:13999335-13998971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr17:5174449-5174079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr17:5805770-5805400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr17:13966783-13966414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
135, 329
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr17:15293865-15293495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr17:17958317-17958683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
135, 333
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr17:38837239-38837604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
126, 118
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr17:39844351-39844721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-565
               

               
Cow position:
               
chr17:39735856-39736337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 141
               

               
Conread position:
               
81-571
               

               
Cow position:
               
chr17:21973461-21972961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 140
               

               
Conread position:
               
81-607
               

               
Cow position:
               
chr17:36331292-36330755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 64
               

               
Conread position:
               
82-362
               

               
Cow position:
               
chr17:36265562-36265281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
179, 90
               

               
Conread position:
               
82-391
               

               
Cow position:
               
chr17:16895623-16895313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
179, 257
               

               
Conread position:
               
82-423
               

               
Cow position:
               
chr17:32399850-32399494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
146, 31
               

               
Conread position:
               
83-228
               

               
Cow position:
               
chr17:12539206-12539063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
122, 88
               

               
Conread position:
               
83-432
               

               
Cow position:
               
chr17:33272001-33271649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 89
               

               
Conread position:
               
83-610
               

               
Cow position:
               
chr17:27795320-27795870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 454
               

               
Conread position:
               
85-225
               

               
Cow position:
               
chr17:19484775-19484635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
85-254
               

               
Cow position:
               
chr17:4155280-4155447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
85-432
               

               
Cow position:
               
chr17:1463833-1464196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
137, 328
               

               
Conread position:
               
86-289
               

               
Cow position:
               
chr17:29074666-29074458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
86-392
               

               
Cow position:
               
chr17:37693788-37694106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
91, 153
               

               
Conread position:
               
86-638
               

               
Cow position:
               
chr17:20022842-20022272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 541
               

               
Conread position:
               
87-328
               

               
Cow position:
               
chr17:43461863-43462096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
88-284
               

               
Cow position:
               
chr17:2274951-2275146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
128, 170
               

               
Conread position:
               
89-320
               

               
Cow position:
               
chr17:6180684-6180929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
90-607
               

               
Cow position:
               
chr17:5000898-5000389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 134
               

               
Conread position:
               
91-214
               

               
Cow position:
               
chr17:20912300-20912423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
91-215
               

               
Cow position:
               
chr17:10432744-10432622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
91-255
               

               
Cow position:
               
chr17:22790778-22790940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
91-391
               

               
Cow position:
               
chr17:39790366-39790689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
91-425
               

               
Cow position:
               
chr17:21874636-21874278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
92-436
               

               
Cow position:
               
chr17:10473516-10473869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 194
               

               
Conread position:
               
93-399
               

               
Cow position:
               
chr17:3306551-3306866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 73
               

               
Conread position:
               
94-568
               

               
Cow position:
               
chr17:40331453-40331930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 5
               

               
Conread position:
               
94-626
               

               
Cow position:
               
chr17:40421352-40421888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 128
               

               
Conread position:
               
95-330
               

               
Cow position:
               
chr17:18410841-18410590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
95-357
               

               
Cow position:
               
chr17:15040721-15040443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
96-526
               

               
Cow position:
               
chr17:20090932-20090511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
97-425
               

               
Cow position:
               
chr17:36746626-36746306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
189, 82
               

               
Conread position:
               
99-432
               

               
Cow position:
               
chr17:43008407-43008755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
99-590
               

               
Cow position:
               
chr17:2810305-2810829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
111, 8
               

               
Conread position:
               
101-255
               

               
Cow position:
               
chr17:28169238-28169393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
101-613
               

               
Cow position:
               
chr17:30529846-30529332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 279
               

               
Conread position:
               
102-242
               

               
Cow position:
               
chr17:39257323-39257186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
102-255
               

               
Cow position:
               
chr17:9936468-9936315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
102-412
               

               
Cow position:
               
chr17:4606663-4606970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
159, 79
               

               
Conread position:
               
102-421
               

               
Cow position:
               
chr17:4299317-4299637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
159, 16
               

               
Conread position:
               
102-437
               

               
Cow position:
               
chr17:17032929-17032580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
114, 316
               

               
Conread position:
               
102-518
               

               
Cow position:
               
chr17:10529050-10528610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
102-571
               

               
Cow position:
               
chr17:29157121-29157587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 119
               

               
Conread position:
               
102-590
               

               
Cow position:
               
chr17:30664970-30665467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 49
               

               
Conread position:
               
102-640
               

               
Cow position:
               
chr17:34079407-34078861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 155
               

               
Conread position:
               
102-644
               

               
Cow position:
               
chr17:14026224-14025661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 313
               

               
Conread position:
               
102-644
               

               
Cow position:
               
chr17:25875100-25875642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 53
               

               
Conread position:
               
103-266
               

               
Cow position:
               
chr17:19765960-19766122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
103-437
               

               
Cow position:
               
chr17:10318823-10319171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
113, 315
               

               
Conread position:
               
104-388
               

               
Cow position:
               
chr17:40642397-40642097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
104-552
               

               
Cow position:
               
chr17:5900081-5900520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
181, 78
               

               
Conread position:
               
104-570
               

               
Cow position:
               
chr17:17405815-17406303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 227
               

               
Conread position:
               
104-570
               

               
Cow position:
               
chr17:25900892-25901370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 118
               

               
Conread position:
               
105-394
               

               
Cow position:
               
chr17:10308318-10308033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 67
               

               
Conread position:
               
105-420
               

               
Cow position:
               
chr17:11304728-11305053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 244
               

               
Conread position:
               
105-420
               

               
Cow position:
               
chr17:34017274-34016964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
154, 117
               

               
Conread position:
               
105-436
               

               
Cow position:
               
chr17:40892848-40893187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
105-449
               

               
Cow position:
               
chr17:1783910-1783556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 15
               

               
Conread position:
               
106-255
               

               
Cow position:
               
chr17:27053466-27053614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 79
               

               
Conread position:
               
106-341
               

               
Cow position:
               
chr17:36318009-36318235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
117, 141
               

               
Conread position:
               
106-350
               

               
Cow position:
               
chr17:13871245-13871505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
106-358
               

               
Cow position:
               
chr17:43826539-43826288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
106-392
               

               
Cow position:
               
chr17:29951238-29951537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
122, 285
               

               
Conread position:
               
106-409
               

               
Cow position:
               
chr17:21871040-21870719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 51
               

               
Conread position:
               
106-419
               

               
Cow position:
               
chr17:11171491-11171812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
151, 116
               

               
Conread position:
               
106-423
               

               
Cow position:
               
chr17:2517144-2516814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
122, 193
               

               
Conread position:
               
106-423
               

               
Cow position:
               
chr17:2520363-2520033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
122, 193
               

               
Conread position:
               
106-426
               

               
Cow position:
               
chr17:36313954-36314269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
117, 141
               

               
Conread position:
               
106-436
               

               
Cow position:
               
chr17:17121371-17121706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
65, 269
               

               
Conread position:
               
106-518
               

               
Cow position:
               
chr17:23063409-23063837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 66
               

               
Conread position:
               
106-546
               

               
Cow position:
               
chr17:43142025-43141563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 274
               

               
Conread position:
               
106-570
               

               
Cow position:
               
chr17:38832739-38833211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 9
               

               
Conread position:
               
107-225
               

               
Cow position:
               
chr17:2249757-2249639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
107-399
               

               
Cow position:
               
chr17:1295875-1295570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
107-423
               

               
Cow position:
               
chr17:11056683-11056349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
107-509
               

               
Cow position:
               
chr17:20889071-20889480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 115
               

               
Conread position:
               
108-571
               

               
Cow position:
               
chr17:9117345-9117815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 24
               

               
Conread position:
               
110-249
               

               
Cow position:
               
chr17:18146026-18145885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
91, 115
               

               
Conread position:
               
110-303
               

               
Cow position:
               
chr17:20874024-20874221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
153, 29
               

               
Conread position:
               
110-445
               

               
Cow position:
               
chr17:3471115-3471463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
111-518
               

               
Cow position:
               
chr17:38614660-38615078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 55
               

               
Conread position:
               
111-542
               

               
Cow position:
               
chr17:5224103-5224540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 305
               

               
Conread position:
               
111-644
               

               
Cow position:
               
chr17:24973650-24974190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 200
               

               
Conread position:
               
112-617
               

               
Cow position:
               
chr17:29472183-29472681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
149, 43
               

               
Conread position:
               
113-413
               

               
Cow position:
               
chr17:5688645-5688343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
65, 51
               

               
Conread position:
               
113-637
               

               
Cow position:
               
chr17:28285317-28284792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
115-326
               

               
Cow position:
               
chr17:27069188-27069408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
144, 72
               

               
Conread position:
               
115-419
               

               
Cow position:
               
chr17:12216367-12216051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 52
               

               
Conread position:
               
116-467
               

               
Cow position:
               
chr17:33291092-33290744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
147, 56
               

               
Conread position:
               
118-639
               

               
Cow position:
               
chr17:13244313-13243812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
180, 37
               

               
Conread position:
               
125-255
               

               
Cow position:
               
chr17:4085419-4085547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
125-364
               

               
Cow position:
               
chr17:6936950-6936697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
125-606
               

               
Cow position:
               
chr17:18720730-18720241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
127-591
               

               
Cow position:
               
chr17:18109370-18108890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 365
               

               
Conread position:
               
130-438
               

               
Cow position:
               
chr17:1080723-1081030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
138, 98
               

               
Conread position:
               
133-403
               

               
Cow position:
               
chr17:21620436-21620722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
133-566
               

               
Cow position:
               
chr17:8544030-8544469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
133-607
               

               
Cow position:
               
chr17:18472909-18473375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
135-571
               

               
Cow position:
               
chr17:22032959-22032526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 92
               

               
Conread position:
               
137-645
               

               
Cow position:
               
chr17:7760744-7760221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 176
               

               
Conread position:
               
139-397
               

               
Cow position:
               
chr17:7041209-7040949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
122, 33
               

               
Conread position:
               
139-408
               

               
Cow position:
               
chr17:17950971-17951250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
120, 218
               

               
Conread position:
               
139-509
               

               
Cow position:
               
chr17:11278294-11277919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
116, 104
               

               
Conread position:
               
139-571
               

               
Cow position:
               
chr17:20126349-20126766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 164
               

               
Conread position:
               
140-543
               

               
Cow position:
               
chr17:25796611-25796196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
117, 278
               

               
Conread position:
               
145-418
               

               
Cow position:
               
chr17:37163795-37163500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
50, 222
               

               
Conread position:
               
145-542
               

               
Cow position:
               
chr17:3503312-3503723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 192
               

               
Conread position:
               
145-571
               

               
Cow position:
               
chr17:8079051-8079487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
103, 144
               

               
Conread position:
               
146-438
               

               
Cow position:
               
chr17:42347486-42347187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
113, 164
               

               
Conread position:
               
146-639
               

               
Cow position:
               
chr17:26818717-26818215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 79
               

               
Conread position:
               
148-431
               

               
Cow position:
               
chr17:4612339-4612047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
152-601
               

               
Cow position:
               
chr17:21115204-21114749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
154-432
               

               
Cow position:
               
chr17:29363621-29363343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
158-571
               

               
Cow position:
               
chr17:17059187-17059596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 69
               

               
Conread position:
               
160-451
               

               
Cow position:
               
chr17:21031537-21031837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
103, 62
               

               
Conread position:
               
161-639
               

               
Cow position:
               
chr17:16371001-16371504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
34, 5
               

               
Conread position:
               
163-593
               

               
Cow position:
               
chr17:21004079-21003633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 145
               

               
Conread position:
               
166-590
               

               
Cow position:
               
chr17:18495752-18495324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
172-605
               

               
Cow position:
               
chr17:11664827-11664367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
173-578
               

               
Cow position:
               
chr17:44147210-44146794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 52
               

               
Conread position:
               
176-539
               

               
Cow position:
               
chr17:14848757-14848407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
176-570
               

               
Cow position:
               
chr17:15340964-15340584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
283, 46
               

               
Conread position:
               
181-511
               

               
Cow position:
               
chr17:8837171-8836837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
51, 304
               

               
Conread position:
               
182-399
               

               
Cow position:
               
chr17:20839787-20839561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
183-432
               

               
Cow position:
               
chr17:33999272-33999014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
79, 161
               

               
Conread position:
               
183-644
               

               
Cow position:
               
chr17:23245983-23246435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
184-571
               

               
Cow position:
               
chr17:35126487-35126876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 327
               

               
Conread position:
               
187-547
               

               
Cow position:
               
chr17:22806758-22806396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
188-438
               

               
Cow position:
               
chr17:18884570-18884293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
189-543
               

               
Cow position:
               
chr17:38200988-38200622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
29, 233
               

               
Conread position:
               
190-363
               

               
Cow position:
               
chr17:15132945-15133121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr17:7132676-7132447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
66, 227
               

               
Conread position:
               
190-422
               

               
Cow position:
               
chr17:34948419-34948662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
190-570
               

               
Cow position:
               
chr17:7697835-7698215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 163
               

               
Conread position:
               
190-575
               

               
Cow position:
               
chr17:27047942-27048333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 161
               

               
Conread position:
               
190-629
               

               
Cow position:
               
chr17:5423292-5422841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
190-637
               

               
Cow position:
               
chr17:6423540-6423994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
190-641
               

               
Cow position:
               
chr17:32419339-32418873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 201
               

               
Conread position:
               
191-375
               

               
Cow position:
               
chr17:28359633-28359821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
191-383
               

               
Cow position:
               
chr17:32554243-32554041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
191-390
               

               
Cow position:
               
chr17:38116192-38116403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
66, 159
               

               
Conread position:
               
191-395
               

               
Cow position:
               
chr17:36817722-36817937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
191-404
               

               
Cow position:
               
chr17:4824281-4824501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
191-417
               

               
Cow position:
               
chr17:20209029-20208812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
191-422
               

               
Cow position:
               
chr17:9778031-9778268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
65, 218
               

               
Conread position:
               
191-445
               

               
Cow position:
               
chr17:21313021-21312765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
191-446
               

               
Cow position:
               
chr17:24761443-24761183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
191-552
               

               
Cow position:
               
chr17:9746301-9746663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
191-590
               

               
Cow position:
               
chr17:12220158-12219751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 113
               

               
Conread position:
               
191-605
               

               
Cow position:
               
chr17:36790928-36791337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
191-606
               

               
Cow position:
               
chr17:24787241-24786814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 148
               

               
Conread position:
               
191-607
               

               
Cow position:
               
chr17:24587398-24587835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 316
               

               
Conread position:
               
191-644
               

               
Cow position:
               
chr17:36275137-36275585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
192-640
               

               
Cow position:
               
chr17:25128568-25128110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 119
               

               
Conread position:
               
192-644
               

               
Cow position:
               
chr17:12325965-12325522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
192-647
               

               
Cow position:
               
chr17:33792963-33793415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 91
               

               
Conread position:
               
193-396
               

               
Cow position:
               
chr17:29040684-29040469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 156
               

               
Conread position:
               
193-398
               

               
Cow position:
               
chr17:5380748-5380969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
193-432
               

               
Cow position:
               
chr17:20835375-20835626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 216
               

               
Conread position:
               
193-517
               

               
Cow position:
               
chr17:20870311-20869980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
193-547
               

               
Cow position:
               
chr17:27142538-27142892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 197
               

               
Conread position:
               
193-554
               

               
Cow position:
               
chr17:11172833-11172462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 160
               

               
Conread position:
               
193-607
               

               
Cow position:
               
chr17:32279125-32278692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
193-616
               

               
Cow position:
               
chr17:24004177-24004596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
193-644
               

               
Cow position:
               
chr17:30713135-30713594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 85
               

               
Conread position:
               
194-383
               

               
Cow position:
               
chr17:3182801-3182601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
194-446
               

               
Cow position:
               
chr17:41290234-41289977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
194-546
               

               
Cow position:
               
chr17:11156710-11156348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
65, 196
               

               
Conread position:
               
195-437
               

               
Cow position:
               
chr17:21628267-21628515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
197-358
               

               
Cow position:
               
chr17:21323086-21323251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
197-374
               

               
Cow position:
               
chr17:25078207-25078027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
197-438
               

               
Cow position:
               
chr17:7436952-7437207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 239
               

               
Conread position:
               
197-570
               

               
Cow position:
               
chr17:17410084-17410463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 344
               

               
Conread position:
               
197-607
               

               
Cow position:
               
chr17:32472005-32471576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 372
               

               
Conread position:
               
197-610
               

               
Cow position:
               
chr17:25097249-25097672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
197-642
               

               
Cow position:
               
chr17:7810953-7810500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 168
               

               
Conread position:
               
197-644
               

               
Cow position:
               
chr17:15684291-15684752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 226
               

               
Conread position:
               
197-644
               

               
Cow position:
               
chr17:20157403-20157856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr17:35372029-35371835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 157
               

               
Conread position:
               
198-437
               

               
Cow position:
               
chr17:1020780-1020525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
52, 224
               

               
Conread position:
               
198-547
               

               
Cow position:
               
chr17:4225704-4225357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 179
               

               
Conread position:
               
199-403
               

               
Cow position:
               
chr17:21017582-21017800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
62, 149
               

               
Conread position:
               
199-511
               

               
Cow position:
               
chr17:1275307-1275634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 277
               

               
Conread position:
               
199-642
               

               
Cow position:
               
chr17:40741435-40741904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 117
               

               
Conread position:
               
200-521
               

               
Cow position:
               
chr17:31231325-31231002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 174
               

               
Conread position:
               
201-388
               

               
Cow position:
               
chr17:966949-966750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
201-460
               

               
Cow position:
               
chr17:27765071-27765333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
62, 106
               

               
Conread position:
               
201-566
               

               
Cow position:
               
chr17:20932126-20932495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
36, 85
               

               
Conread position:
               
202-520
               

               
Cow position:
               
chr17:38646859-38647181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
202-586
               

               
Cow position:
               
chr17:25032681-25032297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 61
               

               
Conread position:
               
203-358
               

               
Cow position:
               
chr17:20912690-20912851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
203-645
               

               
Cow position:
               
chr17:21243994-21243547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
204-580
               

               
Cow position:
               
chr17:1035811-1035417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
204-645
               

               
Cow position:
               
chr17:27429371-27429806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 150
               

               
Conread position:
               
205-393
               

               
Cow position:
               
chr17:33052657-33052853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
205-432
               

               
Cow position:
               
chr17:6624052-6624287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 182
               

               
Conread position:
               
208-644
               

               
Cow position:
               
chr17:12447601-12447155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
211-438
               

               
Cow position:
               
chr17:5514559-5514797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
44, 202
               

               
Conread position:
               
212-509
               

               
Cow position:
               
chr17:21434928-21434622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 130
               

               
Conread position:
               
213-436
               

               
Cow position:
               
chr17:7648022-7648253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
216-432
               

               
Cow position:
               
chr17:4436426-4436200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr17:25999921-26000158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
216-605
               

               
Cow position:
               
chr17:20072270-20071890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
217-552
               

               
Cow position:
               
chr17:9911568-9911908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
7, 148
               

               
Conread position:
               
221-438
               

               
Cow position:
               
chr17:34834393-34834177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
223-606
               

               
Cow position:
               
chr17:25611905-25612298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 175
               

               
Conread position:
               
223-643
               

               
Cow position:
               
chr17:908558-908985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
225-592
               

               
Cow position:
               
chr17:1063003-1063368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
239-445
               

               
Cow position:
               
chr17:30734451-30734250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
244-637
               

               
Cow position:
               
chr17:30728367-30728747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
257-593
               

               
Cow position:
               
chr17:3577399-3577725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
143, 116
               

               
Conread position:
               
258-399
               

               
Cow position:
               
chr17:31481183-31481037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
258-403
               

               
Cow position:
               
chr17:21207273-21207130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
258-403
               

               
Cow position:
               
chr17:21697594-21697740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
258-417
               

               
Cow position:
               
chr17:22781549-22781709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
258-431
               

               
Cow position:
               
chr17:12278352-12278525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 155
               

               
Conread position:
               
258-432
               

               
Cow position:
               
chr17:3442806-3442647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
258-432
               

               
Cow position:
               
chr17:21414977-21414805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 153
               

               
Conread position:
               
258-432
               

               
Cow position:
               
chr17:21437460-21437288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 154
               

               
Conread position:
               
258-438
               

               
Cow position:
               
chr17:33121953-33122129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
258-440
               

               
Cow position:
               
chr17:10020937-10020752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
258-446
               

               
Cow position:
               
chr17:32950134-32950320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 41
               

               
Conread position:
               
258-446
               

               
Cow position:
               
chr17:44232857-44232667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
258-459
               

               
Cow position:
               
chr17:34207958-34207757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
258-461
               

               
Cow position:
               
chr17:10510800-10510597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
258-509
               

               
Cow position:
               
chr17:1256642-1256391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 88
               

               
Conread position:
               
258-526
               

               
Cow position:
               
chr17:4967972-4968238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
234, 102
               

               
Conread position:
               
258-552
               

               
Cow position:
               
chr17:12591025-12591325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 298
               

               
Conread position:
               
258-570
               

               
Cow position:
               
chr17:4121860-4121561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
234, 23
               

               
Conread position:
               
258-603
               

               
Cow position:
               
chr17:9697840-9697472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr17:1562912-1562579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
234, 44
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr17:6328970-6329324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
72, 279
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr17:9966171-9965810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
17, 144
               

               
Conread position:
               
258-626
               

               
Cow position:
               
chr17:4106124-4105748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
234, 23
               

               
Conread position:
               
258-638
               

               
Cow position:
               
chr17:21599823-21599439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 144
               

               
Conread position:
               
258-643
               

               
Cow position:
               
chr17:25916754-25917149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
66, 145
               

               
Conread position:
               
258-644
               

               
Cow position:
               
chr17:12306534-12306147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
258-644
               

               
Cow position:
               
chr17:12536606-12536225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 23
               

               
Conread position:
               
258-644
               

               
Cow position:
               
chr17:12946503-12946106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
260-607
               

               
Cow position:
               
chr17:29025924-29026287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
36, 151
               

               
Conread position:
               
261-403
               

               
Cow position:
               
chr17:35311286-35311430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
261-445
               

               
Cow position:
               
chr17:1353261-1353441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 52
               

               
Conread position:
               
261-566
               

               
Cow position:
               
chr17:27058688-27058392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
231, 28
               

               
Conread position:
               
261-607
               

               
Cow position:
               
chr17:7142729-7143069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
261-638
               

               
Cow position:
               
chr17:31037515-31037131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 20
               

               
Conread position:
               
262-408
               

               
Cow position:
               
chr17:31581346-31581490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
262-433
               

               
Cow position:
               
chr17:33926259-33926093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
262-518
               

               
Cow position:
               
chr17:24149043-24149302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 140
               

               
Conread position:
               
262-518
               

               
Cow position:
               
chr17:34650308-34650578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
262-543
               

               
Cow position:
               
chr17:26233964-26233689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
262-546
               

               
Cow position:
               
chr17:41892202-41891916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
138, 66
               

               
Conread position:
               
262-587
               

               
Cow position:
               
chr17:37482213-37481885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 152
               

               
Conread position:
               
262-607
               

               
Cow position:
               
chr17:32280531-32280880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
214, 38
               

               
Conread position:
               
263-386
               

               
Cow position:
               
chr17:20928777-20928901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
264-441
               

               
Cow position:
               
chr17:26881469-26881291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 95
               

               
Conread position:
               
264-606
               

               
Cow position:
               
chr17:18146050-18146401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
266-511
               

               
Cow position:
               
chr17:14762254-14762011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 72
               

               
Conread position:
               
267-438
               

               
Cow position:
               
chr17:12270049-12269879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 136
               

               
Conread position:
               
267-570
               

               
Cow position:
               
chr17:32273818-32273515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
167, 22
               

               
Conread position:
               
267-646
               

               
Cow position:
               
chr17:6318990-6318619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 81
               

               
Conread position:
               
268-634
               

               
Cow position:
               
chr17:27833493-27833121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 145
               

               
Conread position:
               
269-459
               

               
Cow position:
               
chr17:44561210-44561016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
274-606
               

               
Cow position:
               
chr17:4300044-4299731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
217, 17
               

               
Conread position:
               
275-441
               

               
Cow position:
               
chr17:33411147-33410975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
54, 131
               

               
Conread position:
               
275-570
               

               
Cow position:
               
chr17:20874266-20874565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
276-518
               

               
Cow position:
               
chr17:21918000-21917755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 181
               

               
Conread position:
               
276-552
               

               
Cow position:
               
chr17:6848681-6848945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
276-562
               

               
Cow position:
               
chr17:33658190-33657909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
123, 15
               

               
Conread position:
               
279-509
               

               
Cow position:
               
chr17:14060897-14060665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 117
               

               
Conread position:
               
279-545
               

               
Cow position:
               
chr17:5006608-5006343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
125, 96
               

               
Conread position:
               
279-551
               

               
Cow position:
               
chr17:20990315-20990040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
122, 102
               

               
Conread position:
               
279-571
               

               
Cow position:
               
chr17:24821745-24822034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
158, 86
               

               
Conread position:
               
279-588
               

               
Cow position:
               
chr17:27184061-27183748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
279-605
               

               
Cow position:
               
chr17:20884402-20884738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
213, 122
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr17:28468015-28468375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
120, 76
               

               
Conread position:
               
280-569
               

               
Cow position:
               
chr17:265557-265837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
281-607
               

               
Cow position:
               
chr17:3467648-3467963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
182, 85
               

               
Conread position:
               
281-640
               

               
Cow position:
               
chr17:1634606-1634245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 19
               

               
Conread position:
               
281-647
               

               
Cow position:
               
chr17:32348955-32349312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
115, 47
               

               
Conread position:
               
282-607
               

               
Cow position:
               
chr17:31856545-31856884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 260
               

               
Conread position:
               
283-547
               

               
Cow position:
               
chr17:1040629-1040891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 122
               

               
Conread position:
               
284-605
               

               
Cow position:
               
chr17:25616145-25616452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
208, 16
               

               
Conread position:
               
285-547
               

               
Cow position:
               
chr17:25501995-25502257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
114, 195
               

               
Conread position:
               
285-607
               

               
Cow position:
               
chr17:17683015-17682702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
285-607
               

               
Cow position:
               
chr17:24559178-24559505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 112
               

               
Conread position:
               
285-633
               

               
Cow position:
               
chr17:23563904-23563570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
201, 25
               

               
Conread position:
               
286-547
               

               
Cow position:
               
chr17:35339029-35338774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
206, 112
               

               
Conread position:
               
286-570
               

               
Cow position:
               
chr17:10459051-10458762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
287-570
               

               
Cow position:
               
chr17:11215342-11215061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
291-594
               

               
Cow position:
               
chr17:11832228-11831924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
292-643
               

               
Cow position:
               
chr17:40851875-40852218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
199, 72
               

               
Conread position:
               
296-570
               

               
Cow position:
               
chr17:34751509-34751239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
80, 86
               

               
Conread position:
               
297-459
               

               
Cow position:
               
chr17:32009540-32009382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
298-570
               

               
Cow position:
               
chr17:21325231-21325504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
194, 90
               

               
Conread position:
               
301-607
               

               
Cow position:
               
chr17:11912596-11912293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 54
               

               
Conread position:
               
301-643
               

               
Cow position:
               
chr17:35573664-35573993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
191, 61
               

               
Conread position:
               
301-646
               

               
Cow position:
               
chr17:14652879-14652522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
191, 105
               

               
Conread position:
               
305-640
               

               
Cow position:
               
chr17:36864536-36864871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 71
               

               
Conread position:
               
308-570
               

               
Cow position:
               
chr17:25514215-25513955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
189, 116
               

               
Conread position:
               
310-629
               

               
Cow position:
               
chr17:2275384-2275695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
312-449
               

               
Cow position:
               
chr17:32017968-32017828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
312-521
               

               
Cow position:
               
chr17:23798191-23798402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
312-569
               

               
Cow position:
               
chr17:23517030-23516772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
180, 93
               

               
Conread position:
               
312-570
               

               
Cow position:
               
chr17:27203132-27202878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
314-547
               

               
Cow position:
               
chr17:21758224-21757994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
178, 88
               

               
Conread position:
               
316-607
               

               
Cow position:
               
chr17:40250342-40250622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
318-539
               

               
Cow position:
               
chr17:11368932-11368711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
321-638
               

               
Cow position:
               
chr17:9824590-9824908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 108
               

               
Conread position:
               
322-626
               

               
Cow position:
               
chr17:40406366-40406667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 114
               

               
Conread position:
               
326-643
               

               
Cow position:
               
chr17:12511049-12510733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
327-514
               

               
Cow position:
               
chr17:21478995-21478808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 153
               

               
Conread position:
               
329-640
               

               
Cow position:
               
chr17:3153642-3153325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
163, 62
               

               
Conread position:
               
331-593
               

               
Cow position:
               
chr17:40638881-40639147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
160, 71
               

               
Conread position:
               
334-570
               

               
Cow position:
               
chr17:24750851-24751082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
153, 68
               

               
Conread position:
               
335-607
               

               
Cow position:
               
chr17:1025885-1025622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
157, 67
               

               
Conread position:
               
335-639
               

               
Cow position:
               
chr17:34791131-34790823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
67, 78
               

               
Conread position:
               
340-481
               

               
Cow position:
               
chr17:20269671-20269816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
342-648
               

               
Cow position:
               
chr17:22051651-22051339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
344-607
               

               
Cow position:
               
chr17:5372585-5372320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
76, 207
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr17:39606378-39606656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
352-570
               

               
Cow position:
               
chr17:22017135-22016921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 142
               

               
Conread position:
               
352-640
               

               
Cow position:
               
chr17:18934209-18934504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
352-640
               

               
Cow position:
               
chr17:21039516-21039799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
140, 18
               

               
Conread position:
               
355-605
               

               
Cow position:
               
chr17:33155200-33154948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
137, 97
               

               
Conread position:
               
357-593
               

               
Cow position:
               
chr17:25800925-25800686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
111, 54
               

               
Conread position:
               
366-637
               

               
Cow position:
               
chr17:32333126-32332837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
377-643
               

               
Cow position:
               
chr17:33164840-33164573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
378-507
               

               
Cow position:
               
chr17:35141120-35140990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
378-607
               

               
Cow position:
               
chr17:12959083-12959314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
114, 172
               

               
Conread position:
               
378-607
               

               
Cow position:
               
chr17:29995460-29995223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
378-608
               

               
Cow position:
               
chr17:8815168-8815400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 178
               

               
Conread position:
               
378-640
               

               
Cow position:
               
chr17:25511220-25511486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
379-638
               

               
Cow position:
               
chr17:45296394-45296653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
112, 33
               

               
Conread position:
               
381-570
               

               
Cow position:
               
chr17:24163018-24163204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 84
               

               
Conread position:
               
383-605
               

               
Cow position:
               
chr17:9932319-9932101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 168
               

               
Conread position:
               
388-643
               

               
Cow position:
               
chr17:37341053-37340785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 236
               

               
Conread position:
               
396-639
               

               
Cow position:
               
chr17:21472185-21471944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
413-607
               

               
Cow position:
               
chr17:17034961-17035158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
79, 137
               

               
Conread position:
               
416-638
               

               
Cow position:
               
chr17:42150406-42150630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 196
               

               
Conread position:
               
442-640
               

               
Cow position:
               
chr17:21718956-21718754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
50, 173
               

               
Conread position:
               
454-637
               

               
Cow position:
               
chr17:35043871-35043680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 0
               
Show alignments to all cow chromosomes.