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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8009H15.5
        

               
Conread position:
               
14-326
               

               
Cow position:
               
chr24:32455968-32456291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
243, 52
               

               
Conread position:
               
14-438
               

               
Cow position:
               
chr24:6160544-6160117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
36-241
               

               
Cow position:
               
chr24:40274110-40274311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
39-398
               

               
Cow position:
               
chr24:5849844-5849462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
185, 140
               

               
Conread position:
               
40-552
               

               
Cow position:
               
chr24:32823229-32822681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
43-398
               

               
Cow position:
               
chr24:37205307-37204945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
44-545
               

               
Cow position:
               
chr24:43363929-43364438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 60
               

               
Conread position:
               
47-432
               

               
Cow position:
               
chr24:20221093-20221486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
50-398
               

               
Cow position:
               
chr24:20862389-20862024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 179
               

               
Conread position:
               
50-439
               

               
Cow position:
               
chr24:41333302-41332903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
51-627
               

               
Cow position:
               
chr24:32158691-32158114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
165, 15
               

               
Conread position:
               
53-392
               

               
Cow position:
               
chr24:13354472-13354107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
53-455
               

               
Cow position:
               
chr24:7030565-7030162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
208, 13
               

               
Conread position:
               
56-255
               

               
Cow position:
               
chr24:37229972-37230175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
56-416
               

               
Cow position:
               
chr24:15036651-15037004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
56-419
               

               
Cow position:
               
chr24:12234726-12234373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
203, 19
               

               
Conread position:
               
56-590
               

               
Cow position:
               
chr24:32125045-32124521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
57-255
               

               
Cow position:
               
chr24:15372705-15372900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
57-319
               

               
Cow position:
               
chr24:28335959-28335683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
57-326
               

               
Cow position:
               
chr24:28067348-28067621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
115, 15
               

               
Conread position:
               
57-375
               

               
Cow position:
               
chr24:17763682-17763351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
57-446
               

               
Cow position:
               
chr24:11876464-11876868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
57-607
               

               
Cow position:
               
chr24:33098907-33098325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 139
               

               
Conread position:
               
58-230
               

               
Cow position:
               
chr24:27039464-27039636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
58-231
               

               
Cow position:
               
chr24:16897258-16897086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
58-236
               

               
Cow position:
               
chr24:6416255-6416431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
58-255
               

               
Cow position:
               
chr24:16844752-16844553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 167
               

               
Conread position:
               
59-394
               

               
Cow position:
               
chr24:14337314-14337660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
113, 20
               

               
Conread position:
               
59-420
               

               
Cow position:
               
chr24:17980801-17981146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
59-425
               

               
Cow position:
               
chr24:18075718-18076109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
6, 265
               

               
Conread position:
               
59-607
               

               
Cow position:
               
chr24:28721466-28722024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
59-644
               

               
Cow position:
               
chr24:32054253-32054843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 200
               

               
Conread position:
               
60-241
               

               
Cow position:
               
chr24:10517858-10518039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
60-255
               

               
Cow position:
               
chr24:37037198-37037394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 165
               

               
Conread position:
               
60-333
               

               
Cow position:
               
chr24:36710724-36711000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
222, 0
               

               
Conread position:
               
60-394
               

               
Cow position:
               
chr24:11006797-11007149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
60-437
               

               
Cow position:
               
chr24:11045963-11045589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
171, 112
               

               
Conread position:
               
60-518
               

               
Cow position:
               
chr24:38814558-38815020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 112
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr24:41006434-41006775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
159, 64
               

               
Conread position:
               
61-409
               

               
Cow position:
               
chr24:9087887-9087533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
179, 140
               

               
Conread position:
               
61-426
               

               
Cow position:
               
chr24:27683853-27683483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
62-326
               

               
Cow position:
               
chr24:37480720-37480453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
62-338
               

               
Cow position:
               
chr24:30766457-30766750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
62-365
               

               
Cow position:
               
chr24:40056131-40055821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
12, 111
               

               
Conread position:
               
62-418
               

               
Cow position:
               
chr24:15919291-15919663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
62-420
               

               
Cow position:
               
chr24:38266772-38267146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
62-430
               

               
Cow position:
               
chr24:33230250-33230643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
12, 135
               

               
Conread position:
               
63-351
               

               
Cow position:
               
chr24:18222578-18222272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
63-392
               

               
Cow position:
               
chr24:14124675-14125023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
29, 292
               

               
Conread position:
               
63-422
               

               
Cow position:
               
chr24:25524655-25525004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
63-645
               

               
Cow position:
               
chr24:3493481-3494064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
64-380
               

               
Cow position:
               
chr24:39238384-39238716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
64-443
               

               
Cow position:
               
chr24:11734322-11734700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 127
               

               
Conread position:
               
64-638
               

               
Cow position:
               
chr24:35675145-35675707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 128
               

               
Conread position:
               
65-547
               

               
Cow position:
               
chr24:11118875-11119359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
66-219
               

               
Cow position:
               
chr24:8814421-8814271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
66-220
               

               
Cow position:
               
chr24:39217037-39216881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
66-289
               

               
Cow position:
               
chr24:38655504-38655278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 204
               

               
Conread position:
               
66-326
               

               
Cow position:
               
chr24:15666822-15666545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 225
               

               
Conread position:
               
66-358
               

               
Cow position:
               
chr24:24002566-24002872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
9, 166
               

               
Conread position:
               
66-391
               

               
Cow position:
               
chr24:27484618-27484305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 86
               

               
Conread position:
               
66-392
               

               
Cow position:
               
chr24:9550177-9550521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
66-392
               

               
Cow position:
               
chr24:13173568-13173222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
66-392
               

               
Cow position:
               
chr24:32359227-32358890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
164, 13
               

               
Conread position:
               
66-403
               

               
Cow position:
               
chr24:39440969-39440616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 106
               

               
Conread position:
               
66-408
               

               
Cow position:
               
chr24:37246630-37246268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
66-414
               

               
Cow position:
               
chr24:27720159-27719805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 113
               

               
Conread position:
               
66-418
               

               
Cow position:
               
chr24:32360939-32360569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
8, 347
               

               
Conread position:
               
66-425
               

               
Cow position:
               
chr24:33985426-33985050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
66-432
               

               
Cow position:
               
chr24:29073089-29072698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 355
               

               
Conread position:
               
66-437
               

               
Cow position:
               
chr24:13042074-13041687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 354
               

               
Conread position:
               
66-438
               

               
Cow position:
               
chr24:13819529-13819919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
8, 325
               

               
Conread position:
               
66-448
               

               
Cow position:
               
chr24:28353747-28354137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 141
               

               
Conread position:
               
66-518
               

               
Cow position:
               
chr24:2391779-2392239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
9, 298
               

               
Conread position:
               
66-518
               

               
Cow position:
               
chr24:32693293-32693772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
8, 107
               

               
Conread position:
               
66-588
               

               
Cow position:
               
chr24:11839768-11840314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 131
               

               
Conread position:
               
66-607
               

               
Cow position:
               
chr24:44987785-44987225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
67-219
               

               
Cow position:
               
chr24:14760819-14760973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
67-220
               

               
Cow position:
               
chr24:13373588-13373433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
67-220
               

               
Cow position:
               
chr24:35066874-35066719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
67-224
               

               
Cow position:
               
chr24:20283292-20283137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 95
               

               
Conread position:
               
67-224
               

               
Cow position:
               
chr24:36027595-36027437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 132
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr24:4649358-4649198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr24:9901290-9901450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr24:15084499-15084659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr24:26795336-26795496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-226
               

               
Cow position:
               
chr24:26412966-26413127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-226
               

               
Cow position:
               
chr24:27153733-27153572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-286
               

               
Cow position:
               
chr24:18740449-18740229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 162
               

               
Conread position:
               
67-308
               

               
Cow position:
               
chr24:13319535-13319278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-364
               

               
Cow position:
               
chr24:38296976-38297291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-372
               

               
Cow position:
               
chr24:42835400-42835723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-387
               

               
Cow position:
               
chr24:25706241-25705904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
157, 315
               

               
Conread position:
               
67-391
               

               
Cow position:
               
chr24:39729831-39729487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:193006-193346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 233
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:3794409-3794736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:6085515-6085858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:6443355-6443695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:10655531-10655874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:11080877-11080534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:11104232-11103885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:11152269-11152610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 317
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:12447397-12447740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:14249663-14249320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:15297035-15297377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 265
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:15881006-15881348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:16541255-16540927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
23, 114
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:16993728-16993388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
149, 15
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:20368481-20368826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:20604669-20605012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:23051982-23051640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:25373022-25373365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:27760441-27760784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:30870054-30869721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
16, 114
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:35793768-35794113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:36308496-36308839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:38588697-38589038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:39253844-39254187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr24:40518694-40518360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-418
               

               
Cow position:
               
chr24:22975725-22976093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 311
               

               
Conread position:
               
67-423
               

               
Cow position:
               
chr24:14530953-14531316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
67-428
               

               
Cow position:
               
chr24:35823008-35822633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
22, 344
               

               
Conread position:
               
67-431
               

               
Cow position:
               
chr24:8776895-8777274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 146
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr24:1840951-1840570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr24:8331587-8331208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
149, 351
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr24:11748214-11747845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
22, 239
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr24:14353265-14353646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr24:18113376-18113757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr24:29097553-29097173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 257
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr24:37142227-37142608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr24:39066943-39066562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:207086-206703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 350
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:2118790-2119174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
22, 324
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:4667000-4667385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
22, 352
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:6325452-6325066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:9365881-9365495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:10035124-10034738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:11215468-11215082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:12377197-12376812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 233
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:12518733-12519119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:12701165-12700779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 314
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:13185774-13185391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
148, 350
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:15802733-15803125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:16475383-16475769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:17455967-17456353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:21210998-21210613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 352
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:22954460-22954846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:27185551-27185937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:28494663-28495049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:28832942-28832556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:29788369-29787983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:34271109-34271495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:35877341-35876956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 314
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:36326277-36326663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:38488440-38488826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:38896957-38896571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:40381918-40381534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:40427772-40427393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 234
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr24:42693819-42693433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-606
               

               
Cow position:
               
chr24:18374381-18374910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
71-391
               

               
Cow position:
               
chr24:16610855-16610519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
71-637
               

               
Cow position:
               
chr24:27844925-27844358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 297
               

               
Conread position:
               
71-647
               

               
Cow position:
               
chr24:15247030-15246458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr24:40789668-40789515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
72-255
               

               
Cow position:
               
chr24:39914011-39914190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
72-351
               

               
Cow position:
               
chr24:38593242-38593537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
72-423
               

               
Cow position:
               
chr24:6413401-6413769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
72-437
               

               
Cow position:
               
chr24:7596636-7596258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
113, 101
               

               
Conread position:
               
73-372
               

               
Cow position:
               
chr24:32668875-32669189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
74-408
               

               
Cow position:
               
chr24:6071196-6071541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
182, 98
               

               
Conread position:
               
75-326
               

               
Cow position:
               
chr24:38479365-38479110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
75-441
               

               
Cow position:
               
chr24:18266565-18266187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
186, 24
               

               
Conread position:
               
76-208
               

               
Cow position:
               
chr24:17491504-17491636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-213
               

               
Cow position:
               
chr24:40210078-40209941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-220
               

               
Cow position:
               
chr24:13890712-13890568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-241
               

               
Cow position:
               
chr24:32419623-32419788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-255
               

               
Cow position:
               
chr24:27754296-27754473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
114, 147
               

               
Conread position:
               
76-326
               

               
Cow position:
               
chr24:23616295-23616553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
185, 146
               

               
Conread position:
               
76-340
               

               
Cow position:
               
chr24:11064470-11064729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
151, 21
               

               
Conread position:
               
76-341
               

               
Cow position:
               
chr24:33379655-33379933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
76-358
               

               
Cow position:
               
chr24:22193326-22193624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
179, 21
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr24:14320056-14319733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 289
               

               
Conread position:
               
76-392
               

               
Cow position:
               
chr24:16482924-16482608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
113, 23
               

               
Conread position:
               
76-392
               

               
Cow position:
               
chr24:30768318-30768643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
189, 85
               

               
Conread position:
               
76-392
               

               
Cow position:
               
chr24:32740013-32739686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 177
               

               
Conread position:
               
76-398
               

               
Cow position:
               
chr24:27270396-27270715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
117, 74
               

               
Conread position:
               
76-399
               

               
Cow position:
               
chr24:27809779-27810121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
112, 239
               

               
Conread position:
               
76-405
               

               
Cow position:
               
chr24:43432385-43432734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
17, 167
               

               
Conread position:
               
76-412
               

               
Cow position:
               
chr24:27763402-27763739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 147
               

               
Conread position:
               
76-414
               

               
Cow position:
               
chr24:15472958-15473309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
183, 105
               

               
Conread position:
               
76-417
               

               
Cow position:
               
chr24:18257470-18257121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
140, 159
               

               
Conread position:
               
76-432
               

               
Cow position:
               
chr24:9070835-9070473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
166, 182
               

               
Conread position:
               
76-432
               

               
Cow position:
               
chr24:23034265-23034635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
152, 334
               

               
Conread position:
               
76-432
               

               
Cow position:
               
chr24:35572087-35572450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 129
               

               
Conread position:
               
76-435
               

               
Cow position:
               
chr24:42581231-42580866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 158
               

               
Conread position:
               
76-478
               

               
Cow position:
               
chr24:27052891-27052482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 89
               

               
Conread position:
               
76-506
               

               
Cow position:
               
chr24:7001468-7001028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 20
               

               
Conread position:
               
76-518
               

               
Cow position:
               
chr24:33621886-33621428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 243
               

               
Conread position:
               
76-547
               

               
Cow position:
               
chr24:29064043-29063577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 96
               

               
Conread position:
               
76-547
               

               
Cow position:
               
chr24:29596206-29595729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 44
               

               
Conread position:
               
76-552
               

               
Cow position:
               
chr24:814662-814184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 96
               

               
Conread position:
               
76-564
               

               
Cow position:
               
chr24:24250324-24250821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 361
               

               
Conread position:
               
76-565
               

               
Cow position:
               
chr24:34396540-34396080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
416, 68
               

               
Conread position:
               
76-566
               

               
Cow position:
               
chr24:40129712-40130228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 159
               

               
Conread position:
               
76-570
               

               
Cow position:
               
chr24:2674932-2675414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 70
               

               
Conread position:
               
76-570
               

               
Cow position:
               
chr24:18741970-18741469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
76-580
               

               
Cow position:
               
chr24:27149007-27149498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
185, 116
               

               
Conread position:
               
76-593
               

               
Cow position:
               
chr24:17104963-17104436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 15
               

               
Conread position:
               
76-607
               

               
Cow position:
               
chr24:28496988-28496435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 146
               

               
Conread position:
               
76-607
               

               
Cow position:
               
chr24:32609238-32609796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 158
               

               
Conread position:
               
76-614
               

               
Cow position:
               
chr24:17955836-17955298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 188
               

               
Conread position:
               
76-618
               

               
Cow position:
               
chr24:18025365-18024812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 111
               

               
Conread position:
               
76-628
               

               
Cow position:
               
chr24:5141532-5142119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 155
               

               
Conread position:
               
76-640
               

               
Cow position:
               
chr24:28303750-28303184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 148
               

               
Conread position:
               
76-643
               

               
Cow position:
               
chr24:11886764-11887344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 32
               

               
Conread position:
               
77-392
               

               
Cow position:
               
chr24:11940965-11941294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
78-225
               

               
Cow position:
               
chr24:13492426-13492575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
78-255
               

               
Cow position:
               
chr24:32070270-32070449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
158, 94
               

               
Conread position:
               
78-314
               

               
Cow position:
               
chr24:4616144-4615899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
78-392
               

               
Cow position:
               
chr24:17161047-17160715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
78-405
               

               
Cow position:
               
chr24:20970191-20969860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 181
               

               
Conread position:
               
78-419
               

               
Cow position:
               
chr24:30860230-30860592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
106, 153
               

               
Conread position:
               
78-437
               

               
Cow position:
               
chr24:9044766-9044391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
11, 342
               

               
Conread position:
               
78-552
               

               
Cow position:
               
chr24:29673121-29673607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 464
               

               
Conread position:
               
78-637
               

               
Cow position:
               
chr24:211583-212145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 457
               

               
Conread position:
               
78-644
               

               
Cow position:
               
chr24:18485398-18484810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 235
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr24:5130694-5130553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr24:6080405-6080546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr24:13117566-13117707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr24:15793085-15792944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr24:17544029-17543888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr24:22047142-22046999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr24:39977197-39977056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr24:40035161-40035020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-225
               

               
Cow position:
               
chr24:16962720-16962569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
79-230
               

               
Cow position:
               
chr24:34761441-34761589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
79-254
               

               
Cow position:
               
chr24:8021176-8021355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 129
               

               
Conread position:
               
79-254
               

               
Cow position:
               
chr24:43506910-43506737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
79-255
               

               
Cow position:
               
chr24:32087556-32087381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
79-307
               

               
Cow position:
               
chr24:33639564-33639322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
79-322
               

               
Cow position:
               
chr24:31309027-31309272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
189, 93
               

               
Conread position:
               
79-323
               

               
Cow position:
               
chr24:6067413-6067157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
138, 102
               

               
Conread position:
               
79-323
               

               
Cow position:
               
chr24:36722334-36722583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
79-325
               

               
Cow position:
               
chr24:41963237-41963491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
176, 92
               

               
Conread position:
               
79-326
               

               
Cow position:
               
chr24:17365051-17364792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 231
               

               
Conread position:
               
79-337
               

               
Cow position:
               
chr24:33730468-33730727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
142, 99
               

               
Conread position:
               
79-352
               

               
Cow position:
               
chr24:40974592-40974887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 230
               

               
Conread position:
               
79-354
               

               
Cow position:
               
chr24:27502982-27502700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
146, 257
               

               
Conread position:
               
79-357
               

               
Cow position:
               
chr24:45216512-45216221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 121
               

               
Conread position:
               
79-364
               

               
Cow position:
               
chr24:27593568-27593267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
178, 254
               

               
Conread position:
               
79-364
               

               
Cow position:
               
chr24:32014727-32015024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
79-372
               

               
Cow position:
               
chr24:21104582-21104888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 89
               

               
Conread position:
               
79-379
               

               
Cow position:
               
chr24:38643239-38643554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
182, 143
               

               
Conread position:
               
79-383
               

               
Cow position:
               
chr24:35986108-35985806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
193, 93
               

               
Conread position:
               
79-385
               

               
Cow position:
               
chr24:26846675-26846352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
79-388
               

               
Cow position:
               
chr24:5608472-5608795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
162, 271
               

               
Conread position:
               
79-388
               

               
Cow position:
               
chr24:17993071-17992747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
79-389
               

               
Cow position:
               
chr24:31302624-31302939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 44
               

               
Conread position:
               
79-390
               

               
Cow position:
               
chr24:6141353-6141033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
79-391
               

               
Cow position:
               
chr24:6157696-6157363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 285
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr24:31067121-31066796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr24:40466480-40466152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
79-402
               

               
Cow position:
               
chr24:37975466-37975135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 64
               

               
Conread position:
               
79-403
               

               
Cow position:
               
chr24:29170579-29170907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
189, 105
               

               
Conread position:
               
79-403
               

               
Cow position:
               
chr24:29191217-29191549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
149, 237
               

               
Conread position:
               
79-404
               

               
Cow position:
               
chr24:14279490-14279832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 322
               

               
Conread position:
               
79-404
               

               
Cow position:
               
chr24:36486461-36486120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 50
               

               
Conread position:
               
79-405
               

               
Cow position:
               
chr24:21264903-21264569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
178, 126
               

               
Conread position:
               
79-409
               

               
Cow position:
               
chr24:25677636-25677982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 65
               

               
Conread position:
               
79-409
               

               
Cow position:
               
chr24:29360374-29360049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 12
               

               
Conread position:
               
79-410
               

               
Cow position:
               
chr24:3631119-3631453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 223
               

               
Conread position:
               
79-418
               

               
Cow position:
               
chr24:32854141-32854496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
139, 250
               

               
Conread position:
               
79-420
               

               
Cow position:
               
chr24:39681473-39681810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
79-423
               

               
Cow position:
               
chr24:19837102-19837459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
149, 7
               

               
Conread position:
               
79-423
               

               
Cow position:
               
chr24:19886161-19886518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
149, 7
               

               
Conread position:
               
79-423
               

               
Cow position:
               
chr24:21770053-21770399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
203, 330
               

               
Conread position:
               
79-423
               

               
Cow position:
               
chr24:36780350-36780700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
150, 334
               

               
Conread position:
               
79-426
               

               
Cow position:
               
chr24:12090905-12091270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
138, 343
               

               
Conread position:
               
79-426
               

               
Cow position:
               
chr24:32213067-32212703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
124, 226
               

               
Conread position:
               
79-429
               

               
Cow position:
               
chr24:33238946-33238578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 292
               

               
Conread position:
               
79-430
               

               
Cow position:
               
chr24:39492900-39493260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
137, 91
               

               
Conread position:
               
79-431
               

               
Cow position:
               
chr24:6340621-6340979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 18
               

               
Conread position:
               
79-431
               

               
Cow position:
               
chr24:34564727-34565089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 146
               

               
Conread position:
               
79-432
               

               
Cow position:
               
chr24:16870183-16869817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
167, 223
               

               
Conread position:
               
79-432
               

               
Cow position:
               
chr24:19679475-19679838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
142, 266
               

               
Conread position:
               
79-436
               

               
Cow position:
               
chr24:16625895-16625516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
180, 26
               

               
Conread position:
               
79-438
               

               
Cow position:
               
chr24:6154435-6154784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
79-461
               

               
Cow position:
               
chr24:16267379-16267767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 194
               

               
Conread position:
               
79-461
               

               
Cow position:
               
chr24:17364048-17363653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
66, 118
               

               
Conread position:
               
79-484
               

               
Cow position:
               
chr24:7917766-7917343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 144
               

               
Conread position:
               
79-518
               

               
Cow position:
               
chr24:17406999-17407442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
182, 93
               

               
Conread position:
               
79-522
               

               
Cow position:
               
chr24:29180504-29180943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 143
               

               
Conread position:
               
79-537
               

               
Cow position:
               
chr24:39159941-39159479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 309
               

               
Conread position:
               
79-545
               

               
Cow position:
               
chr24:202030-201557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 152
               

               
Conread position:
               
79-546
               

               
Cow position:
               
chr24:31323891-31324365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 81
               

               
Conread position:
               
79-546
               

               
Cow position:
               
chr24:32370308-32369834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 178
               

               
Conread position:
               
79-547
               

               
Cow position:
               
chr24:25991562-25991099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
66, 163
               

               
Conread position:
               
79-552
               

               
Cow position:
               
chr24:27290479-27290957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 97
               

               
Conread position:
               
79-565
               

               
Cow position:
               
chr24:6450135-6450588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
245, 93
               

               
Conread position:
               
79-570
               

               
Cow position:
               
chr24:12851341-12851810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
182, 72
               

               
Conread position:
               
79-570
               

               
Cow position:
               
chr24:18970900-18970404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 5
               

               
Conread position:
               
79-570
               

               
Cow position:
               
chr24:32205193-32204690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 353
               

               
Conread position:
               
79-590
               

               
Cow position:
               
chr24:19466330-19465785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 159
               

               
Conread position:
               
79-603
               

               
Cow position:
               
chr24:18732512-18731960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 76
               

               
Conread position:
               
79-606
               

               
Cow position:
               
chr24:30484331-30483798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 101
               

               
Conread position:
               
79-607
               

               
Cow position:
               
chr24:30235481-30236019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 267
               

               
Conread position:
               
79-637
               

               
Cow position:
               
chr24:28062549-28063125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 82
               

               
Conread position:
               
79-637
               

               
Cow position:
               
chr24:31811790-31812360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 111
               

               
Conread position:
               
79-644
               

               
Cow position:
               
chr24:27906031-27906620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 291
               

               
Conread position:
               
80-220
               

               
Cow position:
               
chr24:28216450-28216590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
80-392
               

               
Cow position:
               
chr24:16558079-16557751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
80-417
               

               
Cow position:
               
chr24:10308883-10309211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
188, 17
               

               
Conread position:
               
81-225
               

               
Cow position:
               
chr24:3851530-3851674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-226
               

               
Cow position:
               
chr24:16654069-16653924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-328
               

               
Cow position:
               
chr24:22187507-22187257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
172, 227
               

               
Conread position:
               
81-333
               

               
Cow position:
               
chr24:13238015-13238271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
175, 32
               

               
Conread position:
               
81-372
               

               
Cow position:
               
chr24:8754451-8754758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-388
               

               
Cow position:
               
chr24:14145951-14145628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
81-391
               

               
Cow position:
               
chr24:6436397-6436721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
147, 207
               

               
Conread position:
               
81-391
               

               
Cow position:
               
chr24:12697478-12697152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr24:274235-273909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
135, 239
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr24:5931474-5931795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 256
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr24:6019035-6018708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr24:13178810-13178483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr24:14363475-14363161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
145, 167
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr24:17720485-17720165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
180, 234
               

               
Conread position:
               
81-409
               

               
Cow position:
               
chr24:6341773-6342127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
81-419
               

               
Cow position:
               
chr24:35568794-35569140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
99, 116
               

               
Conread position:
               
81-432
               

               
Cow position:
               
chr24:1861962-1861597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
135, 328
               

               
Conread position:
               
81-432
               

               
Cow position:
               
chr24:7782195-7781830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr24:599757-599389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
135, 329
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr24:3163406-3163774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
135, 324
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr24:7986280-7985910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr24:12696188-12695818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
136, 329
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr24:13872390-13872760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr24:15810226-15809857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
135, 325
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr24:17188336-17187966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr24:17251861-17251491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr24:27852459-27852089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
82-391
               

               
Cow position:
               
chr24:6090923-6091248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
82-445
               

               
Cow position:
               
chr24:36555222-36554854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
169, 140
               

               
Conread position:
               
82-642
               

               
Cow position:
               
chr24:44041400-44040832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 79
               

               
Conread position:
               
83-212
               

               
Cow position:
               
chr24:5151658-5151783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
83-358
               

               
Cow position:
               
chr24:28689314-28689599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 233
               

               
Conread position:
               
83-607
               

               
Cow position:
               
chr24:13625896-13626433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
133, 297
               

               
Conread position:
               
85-306
               

               
Cow position:
               
chr24:228119-227883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
135, 42
               

               
Conread position:
               
85-403
               

               
Cow position:
               
chr24:19658156-19658495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
87-426
               

               
Cow position:
               
chr24:16298374-16298721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
174, 74
               

               
Conread position:
               
89-403
               

               
Cow position:
               
chr24:43733583-43733909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
90-217
               

               
Cow position:
               
chr24:40607032-40607158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
90-392
               

               
Cow position:
               
chr24:15875016-15874698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
90-422
               

               
Cow position:
               
chr24:5607520-5607181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
171, 44
               

               
Conread position:
               
91-415
               

               
Cow position:
               
chr24:17309488-17309165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
158, 243
               

               
Conread position:
               
91-607
               

               
Cow position:
               
chr24:33372177-33372693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 70
               

               
Conread position:
               
92-607
               

               
Cow position:
               
chr24:3165441-3165967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 64
               

               
Conread position:
               
93-414
               

               
Cow position:
               
chr24:27874219-27874549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
131, 317
               

               
Conread position:
               
93-437
               

               
Cow position:
               
chr24:28221350-28220992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
123, 325
               

               
Conread position:
               
96-387
               

               
Cow position:
               
chr24:29606449-29606142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
8, 52
               

               
Conread position:
               
96-409
               

               
Cow position:
               
chr24:27543856-27543533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
163, 296
               

               
Conread position:
               
97-365
               

               
Cow position:
               
chr24:6956805-6957078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
127, 65
               

               
Conread position:
               
97-392
               

               
Cow position:
               
chr24:8873448-8873141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 162
               

               
Conread position:
               
99-337
               

               
Cow position:
               
chr24:28233013-28233264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
158, 77
               

               
Conread position:
               
99-410
               

               
Cow position:
               
chr24:40346880-40346564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
158, 56
               

               
Conread position:
               
99-446
               

               
Cow position:
               
chr24:42102993-42103354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 112
               

               
Conread position:
               
99-571
               

               
Cow position:
               
chr24:33153411-33153881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 40
               

               
Conread position:
               
99-603
               

               
Cow position:
               
chr24:39483099-39483606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 108
               

               
Conread position:
               
100-552
               

               
Cow position:
               
chr24:20225364-20225822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
156, 17
               

               
Conread position:
               
101-570
               

               
Cow position:
               
chr24:33944018-33944506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
77, 262
               

               
Conread position:
               
102-255
               

               
Cow position:
               
chr24:33291547-33291402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
102-306
               

               
Cow position:
               
chr24:12448021-12448240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
102-425
               

               
Cow position:
               
chr24:6161219-6160890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
148, 85
               

               
Conread position:
               
102-432
               

               
Cow position:
               
chr24:39900691-39900355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
135, 14
               

               
Conread position:
               
102-436
               

               
Cow position:
               
chr24:3152949-3152610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
159, 84
               

               
Conread position:
               
102-437
               

               
Cow position:
               
chr24:11080253-11079903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
114, 309
               

               
Conread position:
               
102-446
               

               
Cow position:
               
chr24:24137234-24136881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 76
               

               
Conread position:
               
102-461
               

               
Cow position:
               
chr24:43635056-43635433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
102-501
               

               
Cow position:
               
chr24:20024232-20024649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 318
               

               
Conread position:
               
102-546
               

               
Cow position:
               
chr24:28690320-28690765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 230
               

               
Conread position:
               
102-605
               

               
Cow position:
               
chr24:28553920-28553424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 122
               

               
Conread position:
               
102-606
               

               
Cow position:
               
chr24:23556702-23556191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 64
               

               
Conread position:
               
102-644
               

               
Cow position:
               
chr24:2402751-2402194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
102-646
               

               
Cow position:
               
chr24:6149656-6150188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 134
               

               
Conread position:
               
103-350
               

               
Cow position:
               
chr24:40249636-40249899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
103-449
               

               
Cow position:
               
chr24:29027680-29028024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 9
               

               
Conread position:
               
103-606
               

               
Cow position:
               
chr24:20874307-20874826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 54
               

               
Conread position:
               
105-350
               

               
Cow position:
               
chr24:11874995-11874746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
152, 66
               

               
Conread position:
               
105-449
               

               
Cow position:
               
chr24:39219217-39218857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 117
               

               
Conread position:
               
106-220
               

               
Cow position:
               
chr24:20157890-20157776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
106-335
               

               
Cow position:
               
chr24:39289646-39289886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
106-426
               

               
Cow position:
               
chr24:38684473-38684139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
111, 123
               

               
Conread position:
               
106-570
               

               
Cow position:
               
chr24:37650309-37650774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 66
               

               
Conread position:
               
107-344
               

               
Cow position:
               
chr24:5448435-5448182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
107-372
               

               
Cow position:
               
chr24:20923233-20923493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
161, 65
               

               
Conread position:
               
107-399
               

               
Cow position:
               
chr24:18405673-18405386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 113
               

               
Conread position:
               
107-562
               

               
Cow position:
               
chr24:44054511-44054072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
188, 150
               

               
Conread position:
               
108-407
               

               
Cow position:
               
chr24:25320624-25320938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 64
               

               
Conread position:
               
108-432
               

               
Cow position:
               
chr24:33571632-33571970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
108, 302
               

               
Conread position:
               
108-437
               

               
Cow position:
               
chr24:33573467-33573124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
108, 302
               

               
Conread position:
               
109-335
               

               
Cow position:
               
chr24:15288490-15288731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
109-607
               

               
Cow position:
               
chr24:39850244-39849745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 214
               

               
Conread position:
               
110-392
               

               
Cow position:
               
chr24:7748808-7748523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
85, 152
               

               
Conread position:
               
113-455
               

               
Cow position:
               
chr24:634627-634966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 109
               

               
Conread position:
               
113-607
               

               
Cow position:
               
chr24:24491373-24490878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 62
               

               
Conread position:
               
115-341
               

               
Cow position:
               
chr24:28662930-28662697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 222
               

               
Conread position:
               
117-394
               

               
Cow position:
               
chr24:38374930-38375214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
144, 5
               

               
Conread position:
               
118-552
               

               
Cow position:
               
chr24:29679669-29679227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
119-383
               

               
Cow position:
               
chr24:34532766-34533046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
119-437
               

               
Cow position:
               
chr24:28332635-28332303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 48
               

               
Conread position:
               
122-402
               

               
Cow position:
               
chr24:27267284-27267571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
122-616
               

               
Cow position:
               
chr24:15057037-15057542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
123-341
               

               
Cow position:
               
chr24:42862304-42862523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
125-428
               

               
Cow position:
               
chr24:31370099-31369788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
142, 132
               

               
Conread position:
               
125-517
               

               
Cow position:
               
chr24:27341378-27340967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
27, 239
               

               
Conread position:
               
126-398
               

               
Cow position:
               
chr24:7301108-7301394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
131, 35
               

               
Conread position:
               
127-417
               

               
Cow position:
               
chr24:39123514-39123816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
45, 122
               

               
Conread position:
               
128-638
               

               
Cow position:
               
chr24:43028680-43028150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 229
               

               
Conread position:
               
129-519
               

               
Cow position:
               
chr24:15508890-15508490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
57, 102
               

               
Conread position:
               
130-388
               

               
Cow position:
               
chr24:24498518-24498250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
131-441
               

               
Cow position:
               
chr24:17159409-17159725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
128, 56
               

               
Conread position:
               
131-545
               

               
Cow position:
               
chr24:34272457-34272890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
130, 262
               

               
Conread position:
               
132-593
               

               
Cow position:
               
chr24:5754497-5754961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 250
               

               
Conread position:
               
133-410
               

               
Cow position:
               
chr24:38347336-38347630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
134-289
               

               
Cow position:
               
chr24:16645948-16645794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
145, 124
               

               
Conread position:
               
139-552
               

               
Cow position:
               
chr24:28319543-28319122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 243
               

               
Conread position:
               
140-517
               

               
Cow position:
               
chr24:3663849-3664228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
187, 95
               

               
Conread position:
               
141-389
               

               
Cow position:
               
chr24:27465900-27465653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
141-392
               

               
Cow position:
               
chr24:29494212-29493959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
143-432
               

               
Cow position:
               
chr24:12466697-12466403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
98, 255
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr24:20988332-20988101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
144-591
               

               
Cow position:
               
chr24:40300824-40301291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 31
               

               
Conread position:
               
145-625
               

               
Cow position:
               
chr24:17311540-17311051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 184
               

               
Conread position:
               
146-445
               

               
Cow position:
               
chr24:34315029-34315335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
115, 37
               

               
Conread position:
               
149-461
               

               
Cow position:
               
chr24:42007419-42007735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
114, 76
               

               
Conread position:
               
152-608
               

               
Cow position:
               
chr24:26929273-26928793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
107, 266
               

               
Conread position:
               
154-543
               

               
Cow position:
               
chr24:20741000-20741399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
114, 103
               

               
Conread position:
               
157-607
               

               
Cow position:
               
chr24:29781843-29782311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
161-393
               

               
Cow position:
               
chr24:18734675-18734423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
161-507
               

               
Cow position:
               
chr24:39842164-39841807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 331
               

               
Conread position:
               
163-461
               

               
Cow position:
               
chr24:30177923-30178236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
165-545
               

               
Cow position:
               
chr24:8886603-8886990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 187
               

               
Conread position:
               
169-441
               

               
Cow position:
               
chr24:6914072-6913788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
6, 93
               

               
Conread position:
               
173-519
               

               
Cow position:
               
chr24:42345311-42344943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
174-447
               

               
Cow position:
               
chr24:30900526-30900246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
175-590
               

               
Cow position:
               
chr24:28600155-28599741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
86, 122
               

               
Conread position:
               
178-637
               

               
Cow position:
               
chr24:36404447-36403966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
183-439
               

               
Cow position:
               
chr24:35405864-35405592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 258
               

               
Conread position:
               
183-571
               

               
Cow position:
               
chr24:31159335-31159719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
185-357
               

               
Cow position:
               
chr24:39807867-39808032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
139, 37
               

               
Conread position:
               
185-588
               

               
Cow position:
               
chr24:31816294-31816705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 138
               

               
Conread position:
               
185-606
               

               
Cow position:
               
chr24:17860542-17860116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 177
               

               
Conread position:
               
187-461
               

               
Cow position:
               
chr24:35795029-35794740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 194
               

               
Conread position:
               
188-389
               

               
Cow position:
               
chr24:18333363-18333169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
135, 37
               

               
Conread position:
               
188-593
               

               
Cow position:
               
chr24:1269516-1269910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 172
               

               
Conread position:
               
189-437
               

               
Cow position:
               
chr24:35073805-35074065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
74, 230
               

               
Conread position:
               
190-438
               

               
Cow position:
               
chr24:14729123-14729374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 37
               

               
Conread position:
               
190-570
               

               
Cow position:
               
chr24:18331450-18331823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 70
               

               
Conread position:
               
190-640
               

               
Cow position:
               
chr24:27726290-27725830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 67
               

               
Conread position:
               
190-643
               

               
Cow position:
               
chr24:28699771-28700234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 196
               

               
Conread position:
               
191-337
               

               
Cow position:
               
chr24:40257762-40257615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
191-438
               

               
Cow position:
               
chr24:18974916-18975176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
191-518
               

               
Cow position:
               
chr24:27096401-27096742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
191-545
               

               
Cow position:
               
chr24:3430450-3430813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 131
               

               
Conread position:
               
191-552
               

               
Cow position:
               
chr24:16268388-16268043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
191-607
               

               
Cow position:
               
chr24:30229181-30229621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 120
               

               
Conread position:
               
191-616
               

               
Cow position:
               
chr24:23695180-23694753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
192-416
               

               
Cow position:
               
chr24:18243749-18243515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 113
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr24:17567106-17567357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 101
               

               
Conread position:
               
192-565
               

               
Cow position:
               
chr24:25885442-25885061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 127
               

               
Conread position:
               
192-605
               

               
Cow position:
               
chr24:41980947-41980515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
192-644
               

               
Cow position:
               
chr24:27608378-27607929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
193-420
               

               
Cow position:
               
chr24:24311218-24311461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
193-449
               

               
Cow position:
               
chr24:27941291-27941030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
66, 126
               

               
Conread position:
               
193-571
               

               
Cow position:
               
chr24:6102550-6102933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
193-606
               

               
Cow position:
               
chr24:20942894-20943306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
194-521
               

               
Cow position:
               
chr24:7913716-7914062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
197-376
               

               
Cow position:
               
chr24:250848-250659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
197-396
               

               
Cow position:
               
chr24:6900545-6900758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
62, 160
               

               
Conread position:
               
197-408
               

               
Cow position:
               
chr24:8770305-8770527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 217
               

               
Conread position:
               
197-648
               

               
Cow position:
               
chr24:27748375-27748821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
198-374
               

               
Cow position:
               
chr24:28600886-28600705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
199-420
               

               
Cow position:
               
chr24:27967803-27968033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
64, 161
               

               
Conread position:
               
199-514
               

               
Cow position:
               
chr24:30545133-30544817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 58
               

               
Conread position:
               
199-575
               

               
Cow position:
               
chr24:17294464-17294085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
62, 199
               

               
Conread position:
               
199-638
               

               
Cow position:
               
chr24:30314313-30313849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 211
               

               
Conread position:
               
200-404
               

               
Cow position:
               
chr24:18324339-18324560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 219
               

               
Conread position:
               
200-533
               

               
Cow position:
               
chr24:19769222-19769557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
63, 148
               

               
Conread position:
               
201-571
               

               
Cow position:
               
chr24:15861876-15861488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
56, 365
               

               
Conread position:
               
201-607
               

               
Cow position:
               
chr24:43370973-43371390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
62, 211
               

               
Conread position:
               
202-570
               

               
Cow position:
               
chr24:18390562-18390198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
203-509
               

               
Cow position:
               
chr24:23442854-23442537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
60, 159
               

               
Conread position:
               
210-422
               

               
Cow position:
               
chr24:21860486-21860266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
210-521
               

               
Cow position:
               
chr24:45004688-45005003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
51, 112
               

               
Conread position:
               
212-365
               

               
Cow position:
               
chr24:31757943-31757798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
212-506
               

               
Cow position:
               
chr24:29388982-29389272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
47, 104
               

               
Conread position:
               
216-414
               

               
Cow position:
               
chr24:29540160-29539957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 130
               

               
Conread position:
               
217-490
               

               
Cow position:
               
chr24:10841461-10841183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
226-461
               

               
Cow position:
               
chr24:40673677-40673434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
226-563
               

               
Cow position:
               
chr24:27824214-27824558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
241-570
               

               
Cow position:
               
chr24:15373186-15373508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
241-644
               

               
Cow position:
               
chr24:352824-352422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
133, 10
               

               
Conread position:
               
249-546
               

               
Cow position:
               
chr24:2096106-2095801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
252-501
               

               
Cow position:
               
chr24:10125652-10125910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
253-607
               

               
Cow position:
               
chr24:27039830-27040197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 186
               

               
Conread position:
               
257-546
               

               
Cow position:
               
chr24:30897746-30897457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 271
               

               
Conread position:
               
257-599
               

               
Cow position:
               
chr24:31359118-31359457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
257-605
               

               
Cow position:
               
chr24:6132081-6131739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
144, 117
               

               
Conread position:
               
258-345
               

               
Cow position:
               
chr24:11769072-11769159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
258-399
               

               
Cow position:
               
chr24:40184420-40184559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
258-403
               

               
Cow position:
               
chr24:42226094-42226236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
258-408
               

               
Cow position:
               
chr24:40588610-40588761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
258-415
               

               
Cow position:
               
chr24:34579169-34579011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
258-418
               

               
Cow position:
               
chr24:5152030-5152186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
258-440
               

               
Cow position:
               
chr24:34761690-34761867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
67, 128
               

               
Conread position:
               
258-478
               

               
Cow position:
               
chr24:6487716-6487931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 96
               

               
Conread position:
               
258-485
               

               
Cow position:
               
chr24:39833719-39833496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
258-547
               

               
Cow position:
               
chr24:33724054-33723763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
258-565
               

               
Cow position:
               
chr24:34742552-34742851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
192, 21
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr24:28990362-28990709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 43
               

               
Conread position:
               
258-636
               

               
Cow position:
               
chr24:39226795-39227153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 83
               

               
Conread position:
               
258-639
               

               
Cow position:
               
chr24:18474952-18474552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 164
               

               
Conread position:
               
258-643
               

               
Cow position:
               
chr24:10499007-10499399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 94
               

               
Conread position:
               
259-570
               

               
Cow position:
               
chr24:16556839-16556541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
12, 76
               

               
Conread position:
               
261-395
               

               
Cow position:
               
chr24:40408147-40408014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
261-430
               

               
Cow position:
               
chr24:32758964-32758792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
261-445
               

               
Cow position:
               
chr24:28253506-28253686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 20
               

               
Conread position:
               
262-438
               

               
Cow position:
               
chr24:22079257-22079435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
262-509
               

               
Cow position:
               
chr24:39143405-39143656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
262-518
               

               
Cow position:
               
chr24:20250103-20249843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
262-566
               

               
Cow position:
               
chr24:42825697-42825406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
229, 139
               

               
Conread position:
               
262-571
               

               
Cow position:
               
chr24:34008780-34008467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
262-606
               

               
Cow position:
               
chr24:25194067-25194412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
114, 36
               

               
Conread position:
               
264-441
               

               
Cow position:
               
chr24:19633872-19634048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
266-403
               

               
Cow position:
               
chr24:18695421-18695558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 35
               

               
Conread position:
               
274-570
               

               
Cow position:
               
chr24:24457437-24457148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
277-546
               

               
Cow position:
               
chr24:32070778-32071042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
278-415
               

               
Cow position:
               
chr24:17938576-17938711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
279-404
               

               
Cow position:
               
chr24:27202411-27202535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
279-438
               

               
Cow position:
               
chr24:885869-885716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
279-547
               

               
Cow position:
               
chr24:43927508-43927251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
213, 62
               

               
Conread position:
               
279-570
               

               
Cow position:
               
chr24:28327269-28326977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
120, 14
               

               
Conread position:
               
279-607
               

               
Cow position:
               
chr24:16509784-16510119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 134
               

               
Conread position:
               
279-607
               

               
Cow position:
               
chr24:27220277-27219941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 135
               

               
Conread position:
               
279-607
               

               
Cow position:
               
chr24:31036167-31036486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
106, 64
               

               
Conread position:
               
279-616
               

               
Cow position:
               
chr24:17833000-17832660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
45, 126
               

               
Conread position:
               
279-644
               

               
Cow position:
               
chr24:16645512-16645137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 171
               

               
Conread position:
               
281-569
               

               
Cow position:
               
chr24:33222126-33221828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
281-607
               

               
Cow position:
               
chr24:19800662-19800986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
283-543
               

               
Cow position:
               
chr24:16895618-16895358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
209, 108
               

               
Conread position:
               
285-500
               

               
Cow position:
               
chr24:17492135-17492331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
288-605
               

               
Cow position:
               
chr24:18357230-18356908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 60
               

               
Conread position:
               
289-637
               

               
Cow position:
               
chr24:37037723-37038072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 40
               

               
Conread position:
               
291-547
               

               
Cow position:
               
chr24:19736502-19736253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
293-571
               

               
Cow position:
               
chr24:23187089-23186812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
308-460
               

               
Cow position:
               
chr24:4615676-4615526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
312-549
               

               
Cow position:
               
chr24:43967654-43967420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
322-548
               

               
Cow position:
               
chr24:24662272-24662048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
170, 26
               

               
Conread position:
               
322-566
               

               
Cow position:
               
chr24:8006168-8006405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 66
               

               
Conread position:
               
323-629
               

               
Cow position:
               
chr24:28233907-28234208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
82, 65
               

               
Conread position:
               
328-607
               

               
Cow position:
               
chr24:27713541-27713263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
335-616
               

               
Cow position:
               
chr24:13352914-13353184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
157, 39
               

               
Conread position:
               
338-547
               

               
Cow position:
               
chr24:32095193-32095389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
154, 32
               

               
Conread position:
               
338-607
               

               
Cow position:
               
chr24:29561701-29561432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
339-647
               

               
Cow position:
               
chr24:39523573-39523270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
153, 62
               

               
Conread position:
               
344-566
               

               
Cow position:
               
chr24:39791418-39791643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
349-638
               

               
Cow position:
               
chr24:37975097-37974807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
361-639
               

               
Cow position:
               
chr24:230172-230457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
48, 257
               

               
Conread position:
               
362-547
               

               
Cow position:
               
chr24:30308660-30308476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 162
               

               
Conread position:
               
369-571
               

               
Cow position:
               
chr24:28042876-28043079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 183
               

               
Conread position:
               
369-643
               

               
Cow position:
               
chr24:37823432-37823705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
123, 37
               

               
Conread position:
               
371-642
               

               
Cow position:
               
chr24:13948027-13948302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
373-547
               

               
Cow position:
               
chr24:116647-116477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 137
               

               
Conread position:
               
378-647
               

               
Cow position:
               
chr24:20364497-20364231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
401-607
               

               
Cow position:
               
chr24:41916188-41916404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
407-591
               

               
Cow position:
               
chr24:22133112-22133298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 143
               

               
Conread position:
               
407-607
               

               
Cow position:
               
chr24:5360658-5360858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
408-641
               

               
Cow position:
               
chr24:2379894-2380135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
84, 213
               

               
Conread position:
               
475-645
               

               
Cow position:
               
chr24:22129629-22129444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               
Show alignments to all cow chromosomes.