Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8009H15.5
        

               Conread position:
               7-420
               

               Cow position:
               chr27:27867281-27867714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               22-364
               

               Cow position:
               chr27:12650245-12650599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 145
               

               Conread position:
               39-202
               

               Cow position:
               chr27:27240031-27240191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               41-392
               

               Cow position:
               chr27:11417527-11417892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               42-208
               

               Cow position:
               chr27:12001264-12001428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 28
               

               Conread position:
               47-175
               

               Cow position:
               chr27:19647300-19647427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               47-372
               

               Cow position:
               chr27:16030586-16030249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               47-381
               

               Cow position:
               chr27:4824758-4825099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               132, 24
               

               Conread position:
               49-285
               

               Cow position:
               chr27:27896890-27897127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               208, 17
               

               Conread position:
               49-409
               

               Cow position:
               chr27:22603522-22603163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 126
               

               Conread position:
               52-443
               

               Cow position:
               chr27:11723552-11723953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               270
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               203, 10
               

               Conread position:
               52-571
               

               Cow position:
               chr27:27136181-27136692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               527
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 37
               

               Conread position:
               53-416
               

               Cow position:
               chr27:26300189-26299818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               203, 26
               

               Conread position:
               54-463
               

               Cow position:
               chr27:4829460-4829869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 66
               

               Conread position:
               54-644
               

               Cow position:
               chr27:19388373-19387766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               617
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 139
               

               Conread position:
               56-255
               

               Cow position:
               chr27:11634330-11634128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               56-364
               

               Cow position:
               chr27:27187067-27187368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               56-438
               

               Cow position:
               chr27:27605993-27606358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               57-255
               

               Cow position:
               chr27:28106784-28106981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               26, 114
               

               Conread position:
               57-262
               

               Cow position:
               chr27:21283426-21283224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               26, 110
               

               Conread position:
               57-338
               

               Cow position:
               chr27:6292721-6292436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               204, 137
               

               Conread position:
               57-390
               

               Cow position:
               chr27:30702736-30703069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               18, 61
               

               Conread position:
               57-404
               

               Cow position:
               chr27:26091054-26091401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               204, 15
               

               Conread position:
               57-432
               

               Cow position:
               chr27:26341270-26341659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               257
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               159, 361
               

               Conread position:
               57-445
               

               Cow position:
               chr27:22330308-22330720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               26, 179
               

               Conread position:
               57-446
               

               Cow position:
               chr27:9090449-9090847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 264
               

               Conread position:
               58-449
               

               Cow position:
               chr27:6523406-6522993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               281
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               19, 372
               

               Conread position:
               58-514
               

               Cow position:
               chr27:23472601-23472142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               58-540
               

               Cow position:
               chr27:4805560-4806043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 47
               

               Conread position:
               59-226
               

               Cow position:
               chr27:20137650-20137815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               59-403
               

               Cow position:
               chr27:27737585-27737931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               60-242
               

               Cow position:
               chr27:15408073-15408252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               60-326
               

               Cow position:
               chr27:264594-264320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               197, 106
               

               Conread position:
               60-341
               

               Cow position:
               chr27:2900893-2901190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               60-399
               

               Cow position:
               chr27:24559104-24559447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               43, 11
               

               Conread position:
               60-403
               

               Cow position:
               chr27:15272254-15271905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               199, 309
               

               Conread position:
               60-440
               

               Cow position:
               chr27:15349454-15349857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               268
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               89, 307
               

               Conread position:
               60-518
               

               Cow position:
               chr27:15871510-15871040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 334
               

               Conread position:
               60-570
               

               Cow position:
               chr27:20629376-20628896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               339
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               148, 121
               

               Conread position:
               60-593
               

               Cow position:
               chr27:10582711-10582167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               557
               

               Alignm identity:
               355
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               201, 316
               

               Conread position:
               60-607
               

               Cow position:
               chr27:26999075-26999638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 103
               

               Conread position:
               61-356
               

               Cow position:
               chr27:25982369-25982668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               189, 110
               

               Conread position:
               61-389
               

               Cow position:
               chr27:732911-732577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               21, 112
               

               Conread position:
               61-601
               

               Cow position:
               chr27:31219584-31219059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               551
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               62-254
               

               Cow position:
               chr27:23511467-23511276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 112
               

               Conread position:
               62-341
               

               Cow position:
               chr27:9371846-9371560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               172, 163
               

               Conread position:
               62-364
               

               Cow position:
               chr27:12277933-12278236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               224, 41
               

               Conread position:
               62-398
               

               Cow position:
               chr27:12231563-12231911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               100, 17
               

               Conread position:
               62-462
               

               Cow position:
               chr27:4819366-4819769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 10
               

               Conread position:
               62-607
               

               Cow position:
               chr27:16787178-16786616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 324
               

               Conread position:
               62-636
               

               Cow position:
               chr27:18558715-18558116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               610
               

               Alignm identity:
               384
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               12, 108
               

               Conread position:
               62-639
               

               Cow position:
               chr27:24445809-24446385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               596
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 301
               

               Conread position:
               64-359
               

               Cow position:
               chr27:4719550-4719855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               64-409
               

               Cow position:
               chr27:23454804-23455169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               8, 129
               

               Conread position:
               64-568
               

               Cow position:
               chr27:26959278-26959786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               519
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               64-616
               

               Cow position:
               chr27:15454557-15453987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               581
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 258
               

               Conread position:
               66-255
               

               Cow position:
               chr27:13977049-13977239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 11
               

               Conread position:
               66-326
               

               Cow position:
               chr27:20634793-20634525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               151, 168
               

               Conread position:
               66-326
               

               Cow position:
               chr27:30749056-30748788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               66-357
               

               Cow position:
               chr27:9337857-9337557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               11, 108
               

               Conread position:
               66-388
               

               Cow position:
               chr27:9989051-9988718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               66-416
               

               Cow position:
               chr27:30677241-30676889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 156
               

               Conread position:
               66-430
               

               Cow position:
               chr27:5915332-5915714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               12, 325
               

               Conread position:
               66-431
               

               Cow position:
               chr27:27683771-27684154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               8, 55
               

               Conread position:
               66-438
               

               Cow position:
               chr27:21350673-21351062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 30
               

               Conread position:
               66-571
               

               Cow position:
               chr27:6074258-6073759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               514
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 156
               

               Conread position:
               66-607
               

               Cow position:
               chr27:13876070-13875518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               562
               

               Alignm identity:
               362
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               13, 53
               

               Conread position:
               67-220
               

               Cow position:
               chr27:17462806-17462963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               67-220
               

               Cow position:
               chr27:26545581-26545735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-223
               

               Cow position:
               chr27:834201-834360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-224
               

               Cow position:
               chr27:20799239-20799398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               67-225
               

               Cow position:
               chr27:1768941-1769101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               67-225
               

               Cow position:
               chr27:1906412-1906252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-225
               

               Cow position:
               chr27:14125416-14125576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-229
               

               Cow position:
               chr27:9060078-9059910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               67-330
               

               Cow position:
               chr27:13901951-13902231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               67-338
               

               Cow position:
               chr27:1481721-1482010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-364
               

               Cow position:
               chr27:20749698-20750016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 294
               

               Conread position:
               67-365
               

               Cow position:
               chr27:2557155-2556838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               67-372
               

               Cow position:
               chr27:1294075-1294389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               67-374
               

               Cow position:
               chr27:14530501-14530826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               67-381
               

               Cow position:
               chr27:17476386-17476067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               67-388
               

               Cow position:
               chr27:12006976-12007315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               22, 291
               

               Conread position:
               67-391
               

               Cow position:
               chr27:30361549-30361207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-392
               

               Cow position:
               chr27:724372-724715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               67-392
               

               Cow position:
               chr27:2390637-2390295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               67-392
               

               Cow position:
               chr27:3340131-3339788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               67-392
               

               Cow position:
               chr27:3988952-3988610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               67-392
               

               Cow position:
               chr27:5836657-5836998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 95
               

               Conread position:
               67-392
               

               Cow position:
               chr27:9046004-9045664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               22, 311
               

               Conread position:
               67-392
               

               Cow position:
               chr27:11606058-11605721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-392
               

               Cow position:
               chr27:12097938-12097595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-392
               

               Cow position:
               chr27:12147720-12148063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-392
               

               Cow position:
               chr27:14298017-14298359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               22, 283
               

               Conread position:
               67-392
               

               Cow position:
               chr27:15033064-15032724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 107
               

               Conread position:
               67-392
               

               Cow position:
               chr27:15312541-15312206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-392
               

               Cow position:
               chr27:19299738-19299395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-392
               

               Cow position:
               chr27:22655034-22655377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-392
               

               Cow position:
               chr27:23079914-23080257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               67-392
               

               Cow position:
               chr27:29446277-29445937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               149, 289
               

               Conread position:
               67-392
               

               Cow position:
               chr27:30684251-30683908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-421
               

               Cow position:
               chr27:2332328-2332696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 55
               

               Conread position:
               67-422
               

               Cow position:
               chr27:19487156-19486782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-423
               

               Cow position:
               chr27:13422336-13421964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-426
               

               Cow position:
               chr27:19423547-19423165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               67-431
               

               Cow position:
               chr27:12016683-12016305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               22, 123
               

               Conread position:
               67-432
               

               Cow position:
               chr27:1654927-1655308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 354
               

               Conread position:
               67-432
               

               Cow position:
               chr27:4983258-4983641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               67-432
               

               Cow position:
               chr27:12501942-12502323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-432
               

               Cow position:
               chr27:16045558-16045934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 257
               

               Conread position:
               67-432
               

               Cow position:
               chr27:24241291-24240910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-432
               

               Cow position:
               chr27:30271494-30271113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-437
               

               Cow position:
               chr27:32620-33004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               22, 345
               

               Conread position:
               67-437
               

               Cow position:
               chr27:523849-524235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-437
               

               Cow position:
               chr27:1521507-1521893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-437
               

               Cow position:
               chr27:5881356-5881741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               258
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               22, 233
               

               Conread position:
               67-437
               

               Cow position:
               chr27:10590332-10590718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-437
               

               Cow position:
               chr27:12005853-12005467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               253
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-437
               

               Cow position:
               chr27:17403239-17402853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               256
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-437
               

               Cow position:
               chr27:18621143-18620765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               22, 345
               

               Conread position:
               67-437
               

               Cow position:
               chr27:18812030-18811643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               256
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-437
               

               Cow position:
               chr27:19325843-19325457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               22, 108
               

               Conread position:
               67-437
               

               Cow position:
               chr27:20858946-20859325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               22, 106
               

               Conread position:
               67-437
               

               Cow position:
               chr27:22796831-22796446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               22, 219
               

               Conread position:
               67-437
               

               Cow position:
               chr27:26584647-26584263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               22, 317
               

               Conread position:
               67-437
               

               Cow position:
               chr27:27630398-27630782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-437
               

               Cow position:
               chr27:29035554-29035168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               256
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-437
               

               Cow position:
               chr27:29374078-29373694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               22, 310
               

               Conread position:
               67-437
               

               Cow position:
               chr27:30014732-30015118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               257
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-437
               

               Cow position:
               chr27:31566241-31566627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-450
               

               Cow position:
               chr27:8743275-8742878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-461
               

               Cow position:
               chr27:651614-652024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               22, 345
               

               Conread position:
               67-461
               

               Cow position:
               chr27:2001672-2002082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               268
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-532
               

               Cow position:
               chr27:30306449-30305966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 353
               

               Conread position:
               67-546
               

               Cow position:
               chr27:27038500-27038986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 30
               

               Conread position:
               70-546
               

               Cow position:
               chr27:25411177-25411658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 369
               

               Conread position:
               71-303
               

               Cow position:
               chr27:28146312-28146558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               132, 108
               

               Conread position:
               71-547
               

               Cow position:
               chr27:1123354-1122882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 60
               

               Conread position:
               72-235
               

               Cow position:
               chr27:23148192-23148354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               152, 100
               

               Conread position:
               72-358
               

               Cow position:
               chr27:6674571-6674276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 76
               

               Conread position:
               72-382
               

               Cow position:
               chr27:25783920-25783619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               189, 70
               

               Conread position:
               72-392
               

               Cow position:
               chr27:1189477-1189810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               185, 249
               

               Conread position:
               72-392
               

               Cow position:
               chr27:12549445-12549109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               72-392
               

               Cow position:
               chr27:25970845-25970513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               47, 151
               

               Conread position:
               72-432
               

               Cow position:
               chr27:14129839-14129466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               72-519
               

               Cow position:
               chr27:25380333-25379866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 242
               

               Conread position:
               72-542
               

               Cow position:
               chr27:26433478-26433951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 101
               

               Conread position:
               74-432
               

               Cow position:
               chr27:26833505-26833159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               238, 11
               

               Conread position:
               75-179
               

               Cow position:
               chr27:1386979-1386876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               75-408
               

               Cow position:
               chr27:26856878-26857206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 157
               

               Conread position:
               75-433
               

               Cow position:
               chr27:28276602-28276246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               258
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               75-518
               

               Cow position:
               chr27:21408218-21408684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               313
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               115, 38
               

               Conread position:
               76-205
               

               Cow position:
               chr27:20554284-20554153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               76-214
               

               Cow position:
               chr27:26848870-26848734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               76-255
               

               Cow position:
               chr27:12191117-12191296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               76-255
               

               Cow position:
               chr27:13273677-13273853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 89
               

               Conread position:
               76-255
               

               Cow position:
               chr27:16984119-16983940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               76-255
               

               Cow position:
               chr27:29341212-29341399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               76-259
               

               Cow position:
               chr27:20549352-20549543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               102, 16
               

               Conread position:
               76-259
               

               Cow position:
               chr27:26313869-26314048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               76-307
               

               Cow position:
               chr27:427451-427211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               181, 82
               

               Conread position:
               76-326
               

               Cow position:
               chr27:1173211-1173477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               76-326
               

               Cow position:
               chr27:15927104-15926843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               185, 0
               

               Conread position:
               76-363
               

               Cow position:
               chr27:30388885-30389185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               140, 21
               

               Conread position:
               76-392
               

               Cow position:
               chr27:13409834-13410169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               76-392
               

               Cow position:
               chr27:27521672-27522004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               76-393
               

               Cow position:
               chr27:22179455-22179788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               64, 126
               

               Conread position:
               76-404
               

               Cow position:
               chr27:11413047-11412712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               183, 54
               

               Conread position:
               76-419
               

               Cow position:
               chr27:16238228-16237890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 193
               

               Conread position:
               76-420
               

               Cow position:
               chr27:2298744-2298384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               247
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               155, 334
               

               Conread position:
               76-438
               

               Cow position:
               chr27:21977805-21978175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               172, 213
               

               Conread position:
               76-438
               

               Cow position:
               chr27:23502793-23502448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               185, 105
               

               Conread position:
               76-445
               

               Cow position:
               chr27:7289777-7290152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               256
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               185, 307
               

               Conread position:
               76-448
               

               Cow position:
               chr27:27141924-27141552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 149
               

               Conread position:
               76-509
               

               Cow position:
               chr27:26427796-26428244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 336
               

               Conread position:
               76-545
               

               Cow position:
               chr27:8629542-8630018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 219
               

               Conread position:
               76-546
               

               Cow position:
               chr27:11434999-11435469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 76
               

               Conread position:
               76-546
               

               Cow position:
               chr27:20641011-20641482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 291
               

               Conread position:
               76-547
               

               Cow position:
               chr27:8353796-8353329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               76-570
               

               Cow position:
               chr27:19718251-19717742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               523
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 108
               

               Conread position:
               76-571
               

               Cow position:
               chr27:4673347-4672842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               518
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 85
               

               Conread position:
               76-588
               

               Cow position:
               chr27:24227461-24227992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               540
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 243
               

               Conread position:
               76-590
               

               Cow position:
               chr27:1353927-1353382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               548
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 158
               

               Conread position:
               76-591
               

               Cow position:
               chr27:22418435-22418963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               537
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 112
               

               Conread position:
               76-593
               

               Cow position:
               chr27:1768302-1768823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               535
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 43
               

               Conread position:
               76-606
               

               Cow position:
               chr27:299051-299588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               550
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 276
               

               Conread position:
               76-616
               

               Cow position:
               chr27:17645866-17646381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               344
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               323, 181
               

               Conread position:
               76-622
               

               Cow position:
               chr27:23632928-23632366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 54
               

               Conread position:
               76-622
               

               Cow position:
               chr27:25809191-25809759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 146
               

               Conread position:
               76-640
               

               Cow position:
               chr27:15866553-15865968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               596
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 125
               

               Conread position:
               76-640
               

               Cow position:
               chr27:28207124-28206558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               586
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 23
               

               Conread position:
               77-351
               

               Cow position:
               chr27:29812141-29812425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               77-400
               

               Cow position:
               chr27:26796306-26795981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 15
               

               Conread position:
               77-546
               

               Cow position:
               chr27:27064112-27064588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               323
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               7, 90
               

               Conread position:
               78-255
               

               Cow position:
               chr27:26142125-26141947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               78-422
               

               Cow position:
               chr27:29515531-29515876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               110, 145
               

               Conread position:
               79-203
               

               Cow position:
               chr27:21452297-21452420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               79-219
               

               Cow position:
               chr27:8201778-8201914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               79-220
               

               Cow position:
               chr27:21297229-21297088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               79-223
               

               Cow position:
               chr27:12239987-12240131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               79-226
               

               Cow position:
               chr27:18446252-18446400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               79-255
               

               Cow position:
               chr27:23595599-23595426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               79-259
               

               Cow position:
               chr27:17925992-17926168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               79-323
               

               Cow position:
               chr27:26015742-26015484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               151, 156
               

               Conread position:
               79-333
               

               Cow position:
               chr27:12261703-12261456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               79-337
               

               Cow position:
               chr27:25885636-25885878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               183, 93
               

               Conread position:
               79-349
               

               Cow position:
               chr27:20066033-20066309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               106, 143
               

               Conread position:
               79-363
               

               Cow position:
               chr27:22549458-22549751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               171, 50
               

               Conread position:
               79-365
               

               Cow position:
               chr27:18922779-18922482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 143
               

               Conread position:
               79-371
               

               Cow position:
               chr27:31371963-31372266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               5, 281
               

               Conread position:
               79-386
               

               Cow position:
               chr27:28018662-28018344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               178, 17
               

               Conread position:
               79-388
               

               Cow position:
               chr27:11403237-11402924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               151, 156
               

               Conread position:
               79-391
               

               Cow position:
               chr27:5861534-5861203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               79-391
               

               Cow position:
               chr27:9335032-9335357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               143, 102
               

               Conread position:
               79-392
               

               Cow position:
               chr27:15644128-15644457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               79-392
               

               Cow position:
               chr27:19522867-19522538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               79-392
               

               Cow position:
               chr27:26330739-26331072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               79-392
               

               Cow position:
               chr27:28984612-28984937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               79-394
               

               Cow position:
               chr27:1903393-1903062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               8, 108
               

               Conread position:
               79-395
               

               Cow position:
               chr27:16620317-16619990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 93
               

               Conread position:
               79-399
               

               Cow position:
               chr27:7958506-7958843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 319
               

               Conread position:
               79-399
               

               Cow position:
               chr27:25791141-25790801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               79-403
               

               Cow position:
               chr27:16292723-16292406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               140, 93
               

               Conread position:
               79-415
               

               Cow position:
               chr27:25292491-25292144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               101, 70
               

               Conread position:
               79-421
               

               Cow position:
               chr27:26653634-26653281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               78, 88
               

               Conread position:
               79-423
               

               Cow position:
               chr27:10384273-10384634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               149, 314
               

               Conread position:
               79-425
               

               Cow position:
               chr27:6454543-6454185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               11, 132
               

               Conread position:
               79-426
               

               Cow position:
               chr27:4881937-4881570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               79-426
               

               Cow position:
               chr27:20811258-20811620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               143, 276
               

               Conread position:
               79-427
               

               Cow position:
               chr27:11255842-11255490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               248
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               182, 243
               

               Conread position:
               79-431
               

               Cow position:
               chr27:5990210-5989849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               178, 45
               

               Conread position:
               79-432
               

               Cow position:
               chr27:16182393-16182043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               182, 188
               

               Conread position:
               79-432
               

               Cow position:
               chr27:16305451-16305809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               182, 299
               

               Conread position:
               79-432
               

               Cow position:
               chr27:17763750-17763390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               149, 137
               

               Conread position:
               79-436
               

               Cow position:
               chr27:23070034-23070397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 102
               

               Conread position:
               79-438
               

               Cow position:
               chr27:13182459-13182101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               156, 27
               

               Conread position:
               79-438
               

               Cow position:
               chr27:27040927-27040562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               5, 77
               

               Conread position:
               79-439
               

               Cow position:
               chr27:13198234-13197883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               174, 44
               

               Conread position:
               79-440
               

               Cow position:
               chr27:30856073-30856426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               261
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               174, 80
               

               Conread position:
               79-445
               

               Cow position:
               chr27:26397941-26398305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               178, 69
               

               Conread position:
               79-466
               

               Cow position:
               chr27:27449108-27449502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 93
               

               Conread position:
               79-509
               

               Cow position:
               chr27:30583066-30582623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 115
               

               Conread position:
               79-510
               

               Cow position:
               chr27:26785653-26786103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               180, 116
               

               Conread position:
               79-514
               

               Cow position:
               chr27:815694-815245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 360
               

               Conread position:
               79-515
               

               Cow position:
               chr27:24999407-24999859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 116
               

               Conread position:
               79-544
               

               Cow position:
               chr27:22440471-22439994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               324
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               139, 221
               

               Conread position:
               79-545
               

               Cow position:
               chr27:536782-536316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               311
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               203, 82
               

               Conread position:
               79-547
               

               Cow position:
               chr27:8942363-8942839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               314
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               177, 76
               

               Conread position:
               79-564
               

               Cow position:
               chr27:12246974-12246488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               333
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               155, 39
               

               Conread position:
               79-566
               

               Cow position:
               chr27:27460261-27460740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 89
               

               Conread position:
               79-570
               

               Cow position:
               chr27:7212393-7212884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 263
               

               Conread position:
               79-589
               

               Cow position:
               chr27:17473151-17472619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               540
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 63
               

               Conread position:
               79-607
               

               Cow position:
               chr27:13317636-13318192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               369
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               178, 102
               

               Conread position:
               79-607
               

               Cow position:
               chr27:14670052-14670595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               553
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 144
               

               Conread position:
               79-607
               

               Cow position:
               chr27:15867716-15867178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               549
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 130
               

               Conread position:
               79-607
               

               Cow position:
               chr27:15925664-15925127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               547
               

               Alignm identity:
               349
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               67, 117
               

               Conread position:
               79-607
               

               Cow position:
               chr27:17397125-17397666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               552
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 103
               

               Conread position:
               79-607
               

               Cow position:
               chr27:20636747-20637273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               356
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               125, 148
               

               Conread position:
               79-607
               

               Cow position:
               chr27:22171628-22171087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               547
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 61
               

               Conread position:
               79-607
               

               Cow position:
               chr27:26984667-26984139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 12
               

               Conread position:
               79-607
               

               Cow position:
               chr27:31230766-31231294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 109
               

               Conread position:
               79-627
               

               Cow position:
               chr27:21393178-21393730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 75
               

               Conread position:
               79-644
               

               Cow position:
               chr27:8961940-8962493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 258
               

               Conread position:
               79-647
               

               Cow position:
               chr27:20828378-20828974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               603
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 261
               

               Conread position:
               80-226
               

               Cow position:
               chr27:21564984-21564836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               80-388
               

               Cow position:
               chr27:19931481-19931160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               80-420
               

               Cow position:
               chr27:4664800-4664456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               110, 229
               

               Conread position:
               80-436
               

               Cow position:
               chr27:30418003-30417643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               80-607
               

               Cow position:
               chr27:435570-435017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               565
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 71
               

               Conread position:
               81-220
               

               Cow position:
               chr27:2569934-2570073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-220
               

               Cow position:
               chr27:13878043-13878182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-225
               

               Cow position:
               chr27:23894178-23894322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-226
               

               Cow position:
               chr27:15643753-15643898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-239
               

               Cow position:
               chr27:31397495-31397336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               81-241
               

               Cow position:
               chr27:15178540-15178381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               81-330
               

               Cow position:
               chr27:13895537-13895803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               81-347
               

               Cow position:
               chr27:31365856-31365575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               135, 279
               

               Conread position:
               81-392
               

               Cow position:
               chr27:1675697-1675374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               139, 261
               

               Conread position:
               81-392
               

               Cow position:
               chr27:2429908-2430235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               81-392
               

               Cow position:
               chr27:26463559-26463886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               95, 90
               

               Conread position:
               81-414
               

               Cow position:
               chr27:26161832-26161485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               80, 136
               

               Conread position:
               81-418
               

               Cow position:
               chr27:21349421-21349768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               81-422
               

               Cow position:
               chr27:27019776-27020130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               178, 91
               

               Conread position:
               81-431
               

               Cow position:
               chr27:526753-527117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               135, 337
               

               Conread position:
               81-432
               

               Cow position:
               chr27:3239685-3240050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               146, 264
               

               Conread position:
               81-437
               

               Cow position:
               chr27:3650326-3650696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               135, 337
               

               Conread position:
               81-437
               

               Cow position:
               chr27:3690800-3690430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               135, 337
               

               Conread position:
               81-437
               

               Cow position:
               chr27:4769159-4769529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               247
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               147, 337
               

               Conread position:
               81-437
               

               Cow position:
               chr27:11651406-11651036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               135, 337
               

               Conread position:
               81-437
               

               Cow position:
               chr27:26223942-26224311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 152
               

               Conread position:
               81-460
               

               Cow position:
               chr27:29797080-29797473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               135, 328
               

               Conread position:
               81-534
               

               Cow position:
               chr27:30868413-30868877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 141
               

               Conread position:
               82-255
               

               Cow position:
               chr27:20636175-20636005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               84-437
               

               Cow position:
               chr27:30561240-30560874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               109, 153
               

               Conread position:
               85-329
               

               Cow position:
               chr27:16823133-16822882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               194, 64
               

               Conread position:
               85-351
               

               Cow position:
               chr27:5882190-5882471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               135, 87
               

               Conread position:
               86-381
               

               Cow position:
               chr27:18909574-18909269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               109, 229
               

               Conread position:
               91-371
               

               Cow position:
               chr27:15342815-15343083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               81, 97
               

               Conread position:
               91-398
               

               Cow position:
               chr27:26595745-26595419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               164, 121
               

               Conread position:
               91-437
               

               Cow position:
               chr27:9254287-9253953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               84, 61
               

               Conread position:
               96-450
               

               Cow position:
               chr27:16513570-16513926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 126
               

               Conread position:
               96-545
               

               Cow position:
               chr27:29831376-29831845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 130
               

               Conread position:
               97-570
               

               Cow position:
               chr27:20757747-20758202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 120
               

               Conread position:
               99-285
               

               Cow position:
               chr27:28895569-28895752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               117, 88
               

               Conread position:
               99-372
               

               Cow position:
               chr27:13860436-13860716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               152, 73
               

               Conread position:
               99-546
               

               Cow position:
               chr27:26412949-26413403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 7
               

               Conread position:
               102-391
               

               Cow position:
               chr27:221751-222056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               102-398
               

               Cow position:
               chr27:22394475-22394161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               76, 55
               

               Conread position:
               102-437
               

               Cow position:
               chr27:25924089-25923753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               154, 86
               

               Conread position:
               102-548
               

               Cow position:
               chr27:30792624-30793080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 58
               

               Conread position:
               102-552
               

               Cow position:
               chr27:24477706-24477263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 132
               

               Conread position:
               103-444
               

               Cow position:
               chr27:15858786-15859135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 119
               

               Conread position:
               103-571
               

               Cow position:
               chr27:11535793-11536280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 72
               

               Conread position:
               103-637
               

               Cow position:
               chr27:23452779-23452220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 46
               

               Conread position:
               104-346
               

               Cow position:
               chr27:6899411-6899672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               104-645
               

               Cow position:
               chr27:27856645-27856073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 210
               

               Conread position:
               106-253
               

               Cow position:
               chr27:29815907-29815762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               106-361
               

               Cow position:
               chr27:23124054-23124320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               142, 66
               

               Conread position:
               106-374
               

               Cow position:
               chr27:29799244-29798964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               151, 46
               

               Conread position:
               106-409
               

               Cow position:
               chr27:30177268-30177589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               66, 9
               

               Conread position:
               106-420
               

               Cow position:
               chr27:23128756-23128432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               155, 93
               

               Conread position:
               106-445
               

               Cow position:
               chr27:491189-490853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               71, 76
               

               Conread position:
               106-588
               

               Cow position:
               chr27:15315791-15315326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               324
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               162, 104
               

               Conread position:
               107-220
               

               Cow position:
               chr27:18218845-18218732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               107-606
               

               Cow position:
               chr27:20283924-20283430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               344
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               156, 38
               

               Conread position:
               108-427
               

               Cow position:
               chr27:8291710-8292036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               103, 154
               

               Conread position:
               108-431
               

               Cow position:
               chr27:16960496-16960167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               7, 20
               

               Conread position:
               108-437
               

               Cow position:
               chr27:26787064-26787402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               152, 301
               

               Conread position:
               108-607
               

               Cow position:
               chr27:18544298-18543773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               527
               

               Alignm identity:
               341
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               153, 469
               

               Conread position:
               108-639
               

               Cow position:
               chr27:26424289-26424824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               550
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 96
               

               Conread position:
               108-640
               

               Cow position:
               chr27:22035077-22035617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               551
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 38
               

               Conread position:
               109-552
               

               Cow position:
               chr27:4385766-4386215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 196
               

               Conread position:
               110-313
               

               Cow position:
               chr27:20092324-20092533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               74, 34
               

               Conread position:
               111-337
               

               Cow position:
               chr27:9978123-9977888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               146, 67
               

               Conread position:
               111-432
               

               Cow position:
               chr27:23016153-23015820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               150, 297
               

               Conread position:
               113-347
               

               Cow position:
               chr27:26617656-26617417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               85, 59
               

               Conread position:
               113-643
               

               Cow position:
               chr27:28189922-28190442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               544
               

               Alignm identity:
               356
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               135, 258
               

               Conread position:
               116-607
               

               Cow position:
               chr27:26864842-26865323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 13
               

               Conread position:
               117-544
               

               Cow position:
               chr27:26919622-26920057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               139, 90
               

               Conread position:
               118-567
               

               Cow position:
               chr27:20067692-20068143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               316
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               20, 68
               

               Conread position:
               122-392
               

               Cow position:
               chr27:7591402-7591684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               122-547
               

               Cow position:
               chr27:23882079-23882517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               311
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               39, 73
               

               Conread position:
               122-552
               

               Cow position:
               chr27:26581160-26581590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               293
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               102, 145
               

               Conread position:
               122-607
               

               Cow position:
               chr27:28931503-28932017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               518
               

               Alignm identity:
               339
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               20, 51
               

               Conread position:
               123-440
               

               Cow position:
               chr27:7971855-7971522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               123-450
               

               Cow position:
               chr27:30362528-30362194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               132, 124
               

               Conread position:
               125-431
               

               Cow position:
               chr27:13843487-13843185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               97, 149
               

               Conread position:
               126-356
               

               Cow position:
               chr27:2643657-2643885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               145, 6
               

               Conread position:
               126-404
               

               Cow position:
               chr27:22723431-22723712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               134, 33
               

               Conread position:
               126-432
               

               Cow position:
               chr27:14633120-14632806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               105, 174
               

               Conread position:
               127-578
               

               Cow position:
               chr27:28518558-28518111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               134, 23
               

               Conread position:
               136-409
               

               Cow position:
               chr27:12429684-12429391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               56, 93
               

               Conread position:
               136-626
               

               Cow position:
               chr27:21668853-21669349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 96
               

               Conread position:
               138-570
               

               Cow position:
               chr27:30406761-30407207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 282
               

               Conread position:
               139-425
               

               Cow position:
               chr27:31372711-31373006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               126, 54
               

               Conread position:
               140-627
               

               Cow position:
               chr27:23483493-23483002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 172
               

               Conread position:
               140-646
               

               Cow position:
               chr27:7412651-7412140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               528
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 215
               

               Conread position:
               142-570
               

               Cow position:
               chr27:6550717-6550293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 165
               

               Conread position:
               152-607
               

               Cow position:
               chr27:28921643-28922110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               104, 30
               

               Conread position:
               152-644
               

               Cow position:
               chr27:18507888-18507385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               332
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               104, 131
               

               Conread position:
               156-448
               

               Cow position:
               chr27:31147421-31147719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               101, 219
               

               Conread position:
               157-607
               

               Cow position:
               chr27:12516448-12515979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               320
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               102, 26
               

               Conread position:
               157-607
               

               Cow position:
               chr27:23930215-23929763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               299
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               129, 57
               

               Conread position:
               158-521
               

               Cow position:
               chr27:27843742-27844126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               265
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               99, 193
               

               Conread position:
               158-544
               

               Cow position:
               chr27:24014491-24014886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 67
               

               Conread position:
               160-408
               

               Cow position:
               chr27:11081444-11081182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               99, 81
               

               Conread position:
               161-590
               

               Cow position:
               chr27:2957656-2957219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               6, 31
               

               Conread position:
               161-607
               

               Cow position:
               chr27:27388781-27389242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 53
               

               Conread position:
               166-607
               

               Cow position:
               chr27:22220796-22220335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 174
               

               Conread position:
               166-643
               

               Cow position:
               chr27:10980106-10979609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               325
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               97, 193
               

               Conread position:
               166-644
               

               Cow position:
               chr27:16284715-16284233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 60
               

               Conread position:
               167-403
               

               Cow position:
               chr27:26508920-26509166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               81, 47
               

               Conread position:
               168-644
               

               Cow position:
               chr27:6541865-6541385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 240
               

               Conread position:
               171-403
               

               Cow position:
               chr27:13006071-13005834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               172-648
               

               Cow position:
               chr27:26218931-26218461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               310
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               85, 33
               

               Conread position:
               173-404
               

               Cow position:
               chr27:11815524-11815765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               86, 184
               

               Conread position:
               173-409
               

               Cow position:
               chr27:26440823-26441073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 32
               

               Conread position:
               173-509
               

               Cow position:
               chr27:6500300-6499949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               86, 243
               

               Conread position:
               173-607
               

               Cow position:
               chr27:30890521-30890086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               174-445
               

               Cow position:
               chr27:14902415-14902700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               83, 42
               

               Conread position:
               174-638
               

               Cow position:
               chr27:26643907-26643457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 134
               

               Conread position:
               175-416
               

               Cow position:
               chr27:465184-464937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               59, 24
               

               Conread position:
               183-547
               

               Cow position:
               chr27:24321413-24321040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 41
               

               Conread position:
               183-607
               

               Cow position:
               chr27:23554098-23554544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               303
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               73, 25
               

               Conread position:
               184-627
               

               Cow position:
               chr27:20481176-20481589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               316
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               159, 79
               

               Conread position:
               188-533
               

               Cow position:
               chr27:30551216-30550854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               73, 110
               

               Conread position:
               188-611
               

               Cow position:
               chr27:16478129-16478543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               294
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               75, 12
               

               Conread position:
               190-420
               

               Cow position:
               chr27:20765745-20765981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 186
               

               Conread position:
               190-570
               

               Cow position:
               chr27:20796002-20795622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 167
               

               Conread position:
               190-571
               

               Cow position:
               chr27:30354127-30354516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               71, 32
               

               Conread position:
               190-588
               

               Cow position:
               chr27:7934945-7935354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               66, 93
               

               Conread position:
               190-607
               

               Cow position:
               chr27:2592759-2592322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               296
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               73, 35
               

               Conread position:
               191-397
               

               Cow position:
               chr27:22498770-22498557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               47, 55
               

               Conread position:
               191-415
               

               Cow position:
               chr27:19577891-19577656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               70, 31
               

               Conread position:
               191-422
               

               Cow position:
               chr27:707164-706926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               72, 34
               

               Conread position:
               191-468
               

               Cow position:
               chr27:30527383-30527113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               70, 31
               

               Conread position:
               191-547
               

               Cow position:
               chr27:4812660-4813032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               191-565
               

               Cow position:
               chr27:24738584-24738966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               70, 91
               

               Conread position:
               191-589
               

               Cow position:
               chr27:30765249-30764836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               68, 350
               

               Conread position:
               191-607
               

               Cow position:
               chr27:19661160-19660713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               292
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               29, 379
               

               Conread position:
               191-607
               

               Cow position:
               chr27:27204212-27204652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 31
               

               Conread position:
               191-625
               

               Cow position:
               chr27:19543692-19544147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               293
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               68, 379
               

               Conread position:
               191-648
               

               Cow position:
               chr27:27632392-27632857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 119
               

               Conread position:
               192-438
               

               Cow position:
               chr27:2682927-2683185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               192-639
               

               Cow position:
               chr27:20553933-20553501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 120
               

               Conread position:
               193-419
               

               Cow position:
               chr27:11416658-11416425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               24, 46
               

               Conread position:
               193-460
               

               Cow position:
               chr27:27528146-27528417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               70, 168
               

               Conread position:
               193-571
               

               Cow position:
               chr27:27640777-27641182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               277
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               68, 32
               

               Conread position:
               193-607
               

               Cow position:
               chr27:29493702-29494113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               277
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               70, 32
               

               Conread position:
               195-545
               

               Cow position:
               chr27:18593481-18593125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               64, 27
               

               Conread position:
               195-570
               

               Cow position:
               chr27:30359608-30359236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               257
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               64, 135
               

               Conread position:
               196-416
               

               Cow position:
               chr27:28038125-28038361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               197-398
               

               Cow position:
               chr27:22771969-22771750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               197-403
               

               Cow position:
               chr27:9159405-9159188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               53, 214
               

               Conread position:
               197-432
               

               Cow position:
               chr27:28164200-28164437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               60, 197
               

               Conread position:
               197-450
               

               Cow position:
               chr27:16871708-16871968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               64, 26
               

               Conread position:
               198-640
               

               Cow position:
               chr27:23917847-23918280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               303
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               132, 24
               

               Conread position:
               199-572
               

               Cow position:
               chr27:22454570-22454949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               256
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               26, 212
               

               Conread position:
               199-607
               

               Cow position:
               chr27:26239233-26238809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 47
               

               Conread position:
               199-639
               

               Cow position:
               chr27:15668558-15669019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 26
               

               Conread position:
               200-624
               

               Cow position:
               chr27:12596964-12596552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               281
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               201-405
               

               Cow position:
               chr27:26625334-26625123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 113
               

               Conread position:
               201-545
               

               Cow position:
               chr27:1498521-1498167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 283
               

               Conread position:
               201-570
               

               Cow position:
               chr27:25277342-25276971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 7
               

               Conread position:
               202-420
               

               Cow position:
               chr27:19647738-19647965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               61, 26
               

               Conread position:
               202-431
               

               Cow position:
               chr27:18215262-18215020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 178
               

               Conread position:
               202-608
               

               Cow position:
               chr27:30915207-30914791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               270
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               61, 8
               

               Conread position:
               203-593
               

               Cow position:
               chr27:19685509-19685913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 102
               

               Conread position:
               205-408
               

               Cow position:
               chr27:20354783-20354573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               206-421
               

               Cow position:
               chr27:27003079-27003298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 130
               

               Conread position:
               206-461
               

               Cow position:
               chr27:28061560-28061824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               14, 178
               

               Conread position:
               206-552
               

               Cow position:
               chr27:20552567-20552935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               243
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               53, 151
               

               Conread position:
               210-606
               

               Cow position:
               chr27:28001620-28002017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 41
               

               Conread position:
               211-446
               

               Cow position:
               chr27:30843881-30844126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               52, 158
               

               Conread position:
               218-422
               

               Cow position:
               chr27:20592174-20591955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               218-565
               

               Cow position:
               chr27:26151210-26150849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 85
               

               Conread position:
               223-455
               

               Cow position:
               chr27:154543-154306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               252-607
               

               Cow position:
               chr27:29431602-29431261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 97
               

               Conread position:
               256-606
               

               Cow position:
               chr27:16103940-16103597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 7
               

               Conread position:
               258-358
               

               Cow position:
               chr27:26322489-26322389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               258-509
               

               Cow position:
               chr27:20919028-20918779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               69, 111
               

               Conread position:
               258-510
               

               Cow position:
               chr27:4023-3784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               143, 54
               

               Conread position:
               258-545
               

               Cow position:
               chr27:29312534-29312822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               143, 69
               

               Conread position:
               258-555
               

               Cow position:
               chr27:27270403-27270700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               67, 43
               

               Conread position:
               258-568
               

               Cow position:
               chr27:16781000-16780699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               143, 47
               

               Conread position:
               258-570
               

               Cow position:
               chr27:15643311-15643000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               66, 144
               

               Conread position:
               258-570
               

               Cow position:
               chr27:16589577-16589877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               234, 34
               

               Conread position:
               258-586
               

               Cow position:
               chr27:30871924-30872251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               67, 12
               

               Conread position:
               258-606
               

               Cow position:
               chr27:3306909-3306572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               93, 56
               

               Conread position:
               258-607
               

               Cow position:
               chr27:427108-426755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 131
               

               Conread position:
               258-607
               

               Cow position:
               chr27:19668653-19669020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               258-607
               

               Cow position:
               chr27:23891073-23890718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               258-628
               

               Cow position:
               chr27:13252145-13251782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               234, 118
               

               Conread position:
               258-637
               

               Cow position:
               chr27:22547269-22547646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 144
               

               Conread position:
               258-640
               

               Cow position:
               chr27:4944393-4944752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               206, 46
               

               Conread position:
               259-432
               

               Cow position:
               chr27:24061954-24062126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 136
               

               Conread position:
               260-539
               

               Cow position:
               chr27:715639-715359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               70, 5
               

               Conread position:
               261-404
               

               Cow position:
               chr27:6058635-6058493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               63, 118
               

               Conread position:
               261-418
               

               Cow position:
               chr27:25676359-25676204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               89, 18
               

               Conread position:
               261-422
               

               Cow position:
               chr27:22268637-22268477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               261-547
               

               Cow position:
               chr27:4835475-4835757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               149, 89
               

               Conread position:
               261-589
               

               Cow position:
               chr27:26489769-26490102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               133, 290
               

               Conread position:
               261-597
               

               Cow position:
               chr27:6788092-6787753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               64, 151
               

               Conread position:
               261-607
               

               Cow position:
               chr27:28496242-28496586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               82, 126
               

               Conread position:
               262-432
               

               Cow position:
               chr27:8430309-8430479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               146, 42
               

               Conread position:
               262-516
               

               Cow position:
               chr27:22513543-22513796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 38
               

               Conread position:
               262-543
               

               Cow position:
               chr27:18030925-18031217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 244
               

               Conread position:
               262-546
               

               Cow position:
               chr27:26426340-26426067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               262-566
               

               Cow position:
               chr27:27245219-27245522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 24
               

               Conread position:
               262-570
               

               Cow position:
               chr27:30988929-30988627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               68, 40
               

               Conread position:
               262-644
               

               Cow position:
               chr27:19896888-19896511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               143, 68
               

               Conread position:
               263-565
               

               Cow position:
               chr27:17331633-17331337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 217
               

               Conread position:
               267-445
               

               Cow position:
               chr27:14874769-14874588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               268-640
               

               Cow position:
               chr27:8168300-8168673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               55, 145
               

               Conread position:
               269-543
               

               Cow position:
               chr27:20549580-20549857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 95
               

               Conread position:
               270-445
               

               Cow position:
               chr27:10395134-10395306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 25
               

               Conread position:
               274-443
               

               Cow position:
               chr27:9697901-9697731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               128, 89
               

               Conread position:
               274-644
               

               Cow position:
               chr27:14343343-14343688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               255
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               218, 127
               

               Conread position:
               275-644
               

               Cow position:
               chr27:15408921-15409277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 67
               

               Conread position:
               276-547
               

               Cow position:
               chr27:22569893-22569635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               216, 97
               

               Conread position:
               279-438
               

               Cow position:
               chr27:4011797-4011639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               51, 117
               

               Conread position:
               279-592
               

               Cow position:
               chr27:7731130-7731453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               50, 316
               

               Conread position:
               279-613
               

               Cow position:
               chr27:27442052-27442381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 95
               

               Conread position:
               280-501
               

               Cow position:
               chr27:20789260-20789483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               131, 92
               

               Conread position:
               281-509
               

               Cow position:
               chr27:30389180-30389409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               134, 37
               

               Conread position:
               283-526
               

               Cow position:
               chr27:16626010-16625771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               209, 5
               

               Conread position:
               285-570
               

               Cow position:
               chr27:24371347-24371074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               207, 73
               

               Conread position:
               286-569
               

               Cow position:
               chr27:31148871-31148592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               205, 17
               

               Conread position:
               287-607
               

               Cow position:
               chr27:27694662-27694990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               268, 23
               

               Conread position:
               289-501
               

               Cow position:
               chr27:30804448-30804239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               203, 89
               

               Conread position:
               291-580
               

               Cow position:
               chr27:23594422-23594139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               113, 72
               

               Conread position:
               291-607
               

               Cow position:
               chr27:4858540-4858834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 75
               

               Conread position:
               293-545
               

               Cow position:
               chr27:20497318-20497058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               38, 176
               

               Conread position:
               293-628
               

               Cow position:
               chr27:29504543-29504879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               108, 42
               

               Conread position:
               293-646
               

               Cow position:
               chr27:22386974-22386640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 155
               

               Conread position:
               295-547
               

               Cow position:
               chr27:15378378-15378623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               109, 21
               

               Conread position:
               301-546
               

               Cow position:
               chr27:22559725-22559972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               23, 151
               

               Conread position:
               302-626
               

               Cow position:
               chr27:20092743-20093060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 49
               

               Conread position:
               305-507
               

               Cow position:
               chr27:23511082-23510879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               96, 189
               

               Conread position:
               305-606
               

               Cow position:
               chr27:26188914-26188613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               323-547
               

               Cow position:
               chr27:23748486-23748691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               205, 44
               

               Conread position:
               323-566
               

               Cow position:
               chr27:15215307-15215060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               53, 58
               

               Conread position:
               331-545
               

               Cow position:
               chr27:26407099-26407307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               70, 76
               
UCSC Genome Browser
               Conread position:
               331-547
               

               Cow position:
               chr27:4720047-4720262 (view  custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               85, 26
               
UCSC Genome Browser
               
               
               
Conread position: 350-593

               
               
               
Cow position: chr27:23107854-23108103 (view  custom track)

               
               
               
Alignm length: 254

               
               
               
Alignm identity: 183

               
               
               
Alignm E-value: 7e-34

               
               
               
Alignm gaps (pig, cow): 51, 113
UCSC Genome Browser
               
               
               
Conread position: 362-644

               
               
               
Cow position: chr27:23559995-23560279 (view  custom track)

               
               
               
Alignm length: 287

               
               
               
Alignm identity: 203

               
               
               
Alignm E-value: 1.99965e-42

               
               
               
Alignm gaps (pig, cow): 129, 248

               
               
               Conread position:370-571
               
               
               Cow position:chr27:18767035-18767235 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:145
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):31, 66

               
               
               Conread position:372-607
               
               
               Cow position:chr27:29597725-29597960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:163
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):42, 11

               
               
               Conread position:378-638
               
               
               Cow position:chr27:12459304-12459037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:187
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):49, 23

               
               
               Conread position:379-547
               
               
               Cow position:chr27:237288-237121 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:120
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):113, 0

               
               
               Conread position:379-634
               
               
               Cow position:chr27:28242992-28242735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:165
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):107, 26

               
               
               Conread position:382-605
               
               
               Cow position:chr27:19509030-19508799 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:163
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):27, 0

               
               
               Conread position:384-605
               
               
               Cow position:chr27:20897010-20897233 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:162
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):18, 96

               
               
               Conread position:385-626
               
               
               Cow position:chr27:28478594-28478351 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):25, 182

               
               
               Conread position:407-637
               
               
               Cow position:chr27:6319910-6319679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:164
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):85, 203

               
               
               Conread position:408-570
               
               
               Cow position:chr27:788806-788969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):6, 135

               
               
               Conread position:411-570
               
               
               Cow position:chr27:30489423-30489581 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:118
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):81, 139

               
               
               Conread position:438-640
               
               
               Cow position:chr27:19576363-19576569 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):52, 176
Show alignments to all cow chromosomes.
Conread position:	7-420
Cow position:	chr27:27867281-27867714 (view UCSC Genome Browser custom track)
Alignm length:	444
Alignm identity:	291
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	16, 6
Conread position:	22-364
Cow position:	chr27:12650245-12650599 (view UCSC Genome Browser custom track)
Alignm length:	363
Alignm identity:	237
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	52, 145
Conread position:	39-202
Cow position:	chr27:27240031-27240191 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	120
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	27, 0
Conread position:	41-392
Cow position:	chr27:11417527-11417892 (view UCSC Genome Browser custom track)
Alignm length:	369
Alignm identity:	243
Alignm E-value:	6e-32
Alignm gaps (pig, cow):	12, 29
Conread position:	42-208
Cow position:	chr27:12001264-12001428 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	119
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	12, 28
Conread position:	47-175
Cow position:	chr27:19647300-19647427 (view UCSC Genome Browser custom track)
Alignm length:	129
Alignm identity:	98
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	111, 0
Conread position:	47-372
Cow position:	chr27:16030586-16030249 (view UCSC Genome Browser custom track)
Alignm length:	341
Alignm identity:	228
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	7, 23
Conread position:	47-381
Cow position:	chr27:4824758-4825099 (view UCSC Genome Browser custom track)
Alignm length:	346
Alignm identity:	240
Alignm E-value:	1.99965e-42
Alignm gaps (pig, cow):	132, 24
Conread position:	49-285
Cow position:	chr27:27896890-27897127 (view UCSC Genome Browser custom track)
Alignm length:	240
Alignm identity:	170
Alignm E-value:	8e-35
Alignm gaps (pig, cow):	208, 17
Conread position:	49-409
Cow position:	chr27:22603522-22603163 (view UCSC Genome Browser custom track)
Alignm length:	367
Alignm identity:	258
Alignm E-value:	0
Alignm gaps (pig, cow):	28, 126
Conread position:	52-443
Cow position:	chr27:11723552-11723953 (view UCSC Genome Browser custom track)
Alignm length:	408
Alignm identity:	270
Alignm E-value:	5e-40
Alignm gaps (pig, cow):	203, 10
Conread position:	52-571
Cow position:	chr27:27136181-27136692 (view UCSC Genome Browser custom track)
Alignm length:	527
Alignm identity:	360
Alignm E-value:	0
Alignm gaps (pig, cow):	201, 37
Conread position:	53-416
Cow position:	chr27:26300189-26299818 (view UCSC Genome Browser custom track)
Alignm length:	378
Alignm identity:	251
Alignm E-value:	1e-36
Alignm gaps (pig, cow):	203, 26
Conread position:	54-463
Cow position:	chr27:4829460-4829869 (view UCSC Genome Browser custom track)
Alignm length:	420
Alignm identity:	300
Alignm E-value:	0
Alignm gaps (pig, cow):	23, 66
Conread position:	54-644
Cow position:	chr27:19388373-19387766 (view UCSC Genome Browser custom track)
Alignm length:	617
Alignm identity:	430
Alignm E-value:	0
Alignm gaps (pig, cow):	20, 139
Conread position:	56-255
Cow position:	chr27:11634330-11634128 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	137
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	21, 0
Conread position:	56-364
Cow position:	chr27:27187067-27187368 (view UCSC Genome Browser custom track)
Alignm length:	314
Alignm identity:	203
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	19, 94
Conread position:	56-438
Cow position:	chr27:27605993-27606358 (view UCSC Genome Browser custom track)
Alignm length:	383
Alignm identity:	264
Alignm E-value:	0
Alignm gaps (pig, cow):	23, 0
Conread position:	57-255
Cow position:	chr27:28106784-28106981 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	144
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	26, 114
Conread position:	57-262
Cow position:	chr27:21283426-21283224 (view UCSC Genome Browser custom track)
Alignm length:	207
Alignm identity:	143
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	26, 110