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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8009H15.5
        

               
Conread position:
               
20-255
               

               
Cow position:
               
chr4:7810218-7810453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-570
               

               
Cow position:
               
chr4:65650561-65650013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 162
               

               
Conread position:
               
33-446
               

               
Cow position:
               
chr4:242801-243228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
222, 45
               

               
Conread position:
               
35-358
               

               
Cow position:
               
chr4:24198218-24197894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
42, 163
               

               
Conread position:
               
41-337
               

               
Cow position:
               
chr4:44573167-44573450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
191, 36
               

               
Conread position:
               
41-648
               

               
Cow position:
               
chr4:21873778-21874382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
44-425
               

               
Cow position:
               
chr4:19237829-19238213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
217, 35
               

               
Conread position:
               
46-550
               

               
Cow position:
               
chr4:41602465-41602951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
251, 19
               

               
Conread position:
               
49-409
               

               
Cow position:
               
chr4:14159531-14159164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 21
               

               
Conread position:
               
50-255
               

               
Cow position:
               
chr4:42278645-42278435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
51-383
               

               
Cow position:
               
chr4:12697239-12697575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
118, 6
               

               
Conread position:
               
51-398
               

               
Cow position:
               
chr4:2244395-2244036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
173, 21
               

               
Conread position:
               
52-394
               

               
Cow position:
               
chr4:16339993-16339653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
204, 24
               

               
Conread position:
               
53-362
               

               
Cow position:
               
chr4:38799600-38799278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
54-346
               

               
Cow position:
               
chr4:24671582-24671275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
47, 134
               

               
Conread position:
               
54-417
               

               
Cow position:
               
chr4:28378051-28377692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
55-392
               

               
Cow position:
               
chr4:54695479-54695131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
165, 14
               

               
Conread position:
               
56-255
               

               
Cow position:
               
chr4:1736887-1737085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
56-255
               

               
Cow position:
               
chr4:1760615-1760417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
56-255
               

               
Cow position:
               
chr4:26704573-26704375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
56-255
               

               
Cow position:
               
chr4:34347441-34347242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-317
               

               
Cow position:
               
chr4:59118556-59118273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
56-323
               

               
Cow position:
               
chr4:42863972-42864242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
56-328
               

               
Cow position:
               
chr4:41833664-41833385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
56-341
               

               
Cow position:
               
chr4:59884687-59884390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
56-375
               

               
Cow position:
               
chr4:8692561-8692241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
205, 10
               

               
Conread position:
               
56-375
               

               
Cow position:
               
chr4:64072752-64072422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
56-426
               

               
Cow position:
               
chr4:8203034-8202648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
174, 10
               

               
Conread position:
               
56-450
               

               
Cow position:
               
chr4:46861982-46861594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
56-566
               

               
Cow position:
               
chr4:41301406-41300882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 373
               

               
Conread position:
               
57-219
               

               
Cow position:
               
chr4:65538978-65538815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
57-255
               

               
Cow position:
               
chr4:33090150-33089949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
57-255
               

               
Cow position:
               
chr4:38467213-38467410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
57-344
               

               
Cow position:
               
chr4:27348789-27349086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
57-346
               

               
Cow position:
               
chr4:40576309-40576021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
57-383
               

               
Cow position:
               
chr4:46274790-46275127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 256
               

               
Conread position:
               
57-394
               

               
Cow position:
               
chr4:25972498-25972843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
191, 9
               

               
Conread position:
               
57-414
               

               
Cow position:
               
chr4:2609840-2610198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
57-416
               

               
Cow position:
               
chr4:33564470-33564815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
204, 99
               

               
Conread position:
               
57-420
               

               
Cow position:
               
chr4:38181292-38181653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
167, 9
               

               
Conread position:
               
57-424
               

               
Cow position:
               
chr4:43370252-43369875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
57-436
               

               
Cow position:
               
chr4:1237505-1237127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 123
               

               
Conread position:
               
57-465
               

               
Cow position:
               
chr4:39009566-39009988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 131
               

               
Conread position:
               
57-505
               

               
Cow position:
               
chr4:39231925-39231464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 30
               

               
Conread position:
               
57-519
               

               
Cow position:
               
chr4:23853802-23854251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
57-546
               

               
Cow position:
               
chr4:962052-961553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
206, 92
               

               
Conread position:
               
57-547
               

               
Cow position:
               
chr4:3850155-3850650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 109
               

               
Conread position:
               
57-551
               

               
Cow position:
               
chr4:27755708-27755202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 131
               

               
Conread position:
               
57-552
               

               
Cow position:
               
chr4:20523-21015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
57-552
               

               
Cow position:
               
chr4:29805783-29805271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 185
               

               
Conread position:
               
57-603
               

               
Cow position:
               
chr4:25889251-25888684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
57-638
               

               
Cow position:
               
chr4:25369718-25370291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 9
               

               
Conread position:
               
58-337
               

               
Cow position:
               
chr4:48875018-48874737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
58-400
               

               
Cow position:
               
chr4:8133938-8133588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 197
               

               
Conread position:
               
58-407
               

               
Cow position:
               
chr4:58857137-58856774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 116
               

               
Conread position:
               
58-415
               

               
Cow position:
               
chr4:59333371-59333015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
58-420
               

               
Cow position:
               
chr4:48499429-48499810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
7, 182
               

               
Conread position:
               
58-428
               

               
Cow position:
               
chr4:15282958-15283340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
58-430
               

               
Cow position:
               
chr4:9649622-9649985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
7, 163
               

               
Conread position:
               
59-205
               

               
Cow position:
               
chr4:22861320-22861174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
59-255
               

               
Cow position:
               
chr4:46068903-46069100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 99
               

               
Conread position:
               
59-266
               

               
Cow position:
               
chr4:19502203-19501994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
59-266
               

               
Cow position:
               
chr4:68796258-68796468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
59-419
               

               
Cow position:
               
chr4:19306856-19307231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 163
               

               
Conread position:
               
59-420
               

               
Cow position:
               
chr4:23554852-23555229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
198, 107
               

               
Conread position:
               
59-531
               

               
Cow position:
               
chr4:28399800-28399331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
59-547
               

               
Cow position:
               
chr4:11872313-11871823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 332
               

               
Conread position:
               
60-177
               

               
Cow position:
               
chr4:53822492-53822608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
60-254
               

               
Cow position:
               
chr4:65972840-65972653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
170, 11
               

               
Conread position:
               
60-255
               

               
Cow position:
               
chr4:8760849-8761042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
60-255
               

               
Cow position:
               
chr4:19420937-19421126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 6
               

               
Conread position:
               
60-259
               

               
Cow position:
               
chr4:1462888-1463083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
111, 38
               

               
Conread position:
               
60-382
               

               
Cow position:
               
chr4:14513636-14513304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
60-395
               

               
Cow position:
               
chr4:21058789-21058436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
106, 167
               

               
Conread position:
               
60-412
               

               
Cow position:
               
chr4:43543133-43542772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
164, 284
               

               
Conread position:
               
60-437
               

               
Cow position:
               
chr4:53999919-53999521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 374
               

               
Conread position:
               
60-438
               

               
Cow position:
               
chr4:351829-352226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
60-443
               

               
Cow position:
               
chr4:54494440-54494817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 104
               

               
Conread position:
               
60-464
               

               
Cow position:
               
chr4:27292359-27291942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
60-521
               

               
Cow position:
               
chr4:16799587-16799113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 101
               

               
Conread position:
               
60-544
               

               
Cow position:
               
chr4:63459614-63459129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
60-548
               

               
Cow position:
               
chr4:65179532-65179047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 30
               

               
Conread position:
               
60-623
               

               
Cow position:
               
chr4:68387396-68387970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 6
               

               
Conread position:
               
60-639
               

               
Cow position:
               
chr4:20328112-20327530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 120
               

               
Conread position:
               
60-640
               

               
Cow position:
               
chr4:47730472-47731066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 111
               

               
Conread position:
               
60-644
               

               
Cow position:
               
chr4:19584305-19584912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 375
               

               
Conread position:
               
61-259
               

               
Cow position:
               
chr4:41999580-41999386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
61-262
               

               
Cow position:
               
chr4:48142382-48142583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
61-337
               

               
Cow position:
               
chr4:14812922-14812640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
61-432
               

               
Cow position:
               
chr4:23311658-23311272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
165, 291
               

               
Conread position:
               
61-440
               

               
Cow position:
               
chr4:5777431-5777053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
16, 272
               

               
Conread position:
               
61-445
               

               
Cow position:
               
chr4:48784578-48784972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
194, 111
               

               
Conread position:
               
61-514
               

               
Cow position:
               
chr4:25806502-25806965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 48
               

               
Conread position:
               
61-570
               

               
Cow position:
               
chr4:36892958-36893479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 99
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr4:18108390-18108592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 187
               

               
Conread position:
               
62-259
               

               
Cow position:
               
chr4:17774990-17774792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 162
               

               
Conread position:
               
62-341
               

               
Cow position:
               
chr4:39646301-39646587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 201
               

               
Conread position:
               
62-398
               

               
Cow position:
               
chr4:1373996-1374312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
8, 126
               

               
Conread position:
               
62-412
               

               
Cow position:
               
chr4:67392564-67392923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 132
               

               
Conread position:
               
62-445
               

               
Cow position:
               
chr4:29035519-29035908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 112
               

               
Conread position:
               
62-462
               

               
Cow position:
               
chr4:47774028-47773626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
197, 80
               

               
Conread position:
               
62-483
               

               
Cow position:
               
chr4:17124689-17124258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 198
               

               
Conread position:
               
62-644
               

               
Cow position:
               
chr4:62471670-62472280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 362
               

               
Conread position:
               
63-226
               

               
Cow position:
               
chr4:36660126-36659961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
63-398
               

               
Cow position:
               
chr4:27997286-27997633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
21, 284
               

               
Conread position:
               
63-404
               

               
Cow position:
               
chr4:16239535-16239193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
103, 196
               

               
Conread position:
               
63-545
               

               
Cow position:
               
chr4:25983840-25984317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 111
               

               
Conread position:
               
63-551
               

               
Cow position:
               
chr4:10055815-10056306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
198, 323
               

               
Conread position:
               
63-568
               

               
Cow position:
               
chr4:7704705-7704206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
131, 240
               

               
Conread position:
               
63-607
               

               
Cow position:
               
chr4:12003826-12004381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 352
               

               
Conread position:
               
64-179
               

               
Cow position:
               
chr4:67408096-67408213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
64-310
               

               
Cow position:
               
chr4:47047344-47047610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
10, 99
               

               
Conread position:
               
64-360
               

               
Cow position:
               
chr4:19255927-19256227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
64-437
               

               
Cow position:
               
chr4:54540604-54540993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
25, 356
               

               
Conread position:
               
64-503
               

               
Cow position:
               
chr4:13271753-13272197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
64-514
               

               
Cow position:
               
chr4:51898606-51899072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
64-521
               

               
Cow position:
               
chr4:66112470-66111998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 108
               

               
Conread position:
               
64-536
               

               
Cow position:
               
chr4:20139924-20139429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 168
               

               
Conread position:
               
64-565
               

               
Cow position:
               
chr4:62772334-62771804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 503
               

               
Conread position:
               
64-569
               

               
Cow position:
               
chr4:45644708-45644200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
64-570
               

               
Cow position:
               
chr4:65919226-65919728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
64-571
               

               
Cow position:
               
chr4:14152676-14153228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
10, 237
               

               
Conread position:
               
64-605
               

               
Cow position:
               
chr4:11193788-11194344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
64-626
               

               
Cow position:
               
chr4:19096900-19097475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 107
               

               
Conread position:
               
64-626
               

               
Cow position:
               
chr4:64791491-64792025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
114, 73
               

               
Conread position:
               
64-638
               

               
Cow position:
               
chr4:3421249-3421822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 154
               

               
Conread position:
               
65-203
               

               
Cow position:
               
chr4:40410749-40410611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
66-195
               

               
Cow position:
               
chr4:51866507-51866635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
66-213
               

               
Cow position:
               
chr4:28173309-28173162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
66-214
               

               
Cow position:
               
chr4:44956597-44956448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
66-220
               

               
Cow position:
               
chr4:21943145-21942989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
66-220
               

               
Cow position:
               
chr4:59643184-59643342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
66-224
               

               
Cow position:
               
chr4:49814409-49814249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
66-225
               

               
Cow position:
               
chr4:28676607-28676446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
66-255
               

               
Cow position:
               
chr4:22906643-22906834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
66-255
               

               
Cow position:
               
chr4:66119208-66119019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
9, 108
               

               
Conread position:
               
66-280
               

               
Cow position:
               
chr4:1355905-1355693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
66-284
               

               
Cow position:
               
chr4:38067495-38067706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
66-316
               

               
Cow position:
               
chr4:25354160-25354426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
8, 42
               

               
Conread position:
               
66-326
               

               
Cow position:
               
chr4:37169208-37168945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
66-341
               

               
Cow position:
               
chr4:11925495-11925208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 108
               

               
Conread position:
               
66-349
               

               
Cow position:
               
chr4:22073061-22072769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 88
               

               
Conread position:
               
66-380
               

               
Cow position:
               
chr4:27466300-27466631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 261
               

               
Conread position:
               
66-387
               

               
Cow position:
               
chr4:27546365-27546705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
66-437
               

               
Cow position:
               
chr4:61972870-61972475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 133
               

               
Conread position:
               
66-438
               

               
Cow position:
               
chr4:43866240-43865865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
66-438
               

               
Cow position:
               
chr4:53545647-53546018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
66-481
               

               
Cow position:
               
chr4:11201425-11201852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
8, 97
               

               
Conread position:
               
66-481
               

               
Cow position:
               
chr4:53208845-53209269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 154
               

               
Conread position:
               
66-509
               

               
Cow position:
               
chr4:17833300-17832840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
9, 158
               

               
Conread position:
               
66-545
               

               
Cow position:
               
chr4:18255469-18255948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 158
               

               
Conread position:
               
66-546
               

               
Cow position:
               
chr4:43148007-43148509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 140
               

               
Conread position:
               
66-571
               

               
Cow position:
               
chr4:45589979-45589480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 56
               

               
Conread position:
               
66-638
               

               
Cow position:
               
chr4:27276938-27276348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 195
               

               
Conread position:
               
67-214
               

               
Cow position:
               
chr4:54918473-54918324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-215
               

               
Cow position:
               
chr4:13375181-13375331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-220
               

               
Cow position:
               
chr4:6414316-6414471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-220
               

               
Cow position:
               
chr4:6446320-6446475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr4:3446633-3446473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr4:24807470-24807310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr4:26131722-26131882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr4:31774755-31774595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr4:33146421-33146582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr4:33628723-33628563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr4:62120572-62120732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr4:64061466-64061305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-226
               

               
Cow position:
               
chr4:43884649-43884809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
67-299
               

               
Cow position:
               
chr4:48959288-48959040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
67-300
               

               
Cow position:
               
chr4:4169382-4169632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-303
               

               
Cow position:
               
chr4:4487529-4487782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-306
               

               
Cow position:
               
chr4:7260247-7259991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-318
               

               
Cow position:
               
chr4:68470643-68470376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
67-323
               

               
Cow position:
               
chr4:17375850-17375590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
192, 167
               

               
Conread position:
               
67-340
               

               
Cow position:
               
chr4:41639882-41640170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 277
               

               
Conread position:
               
67-358
               

               
Cow position:
               
chr4:12018167-12018472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
16, 93
               

               
Conread position:
               
67-360
               

               
Cow position:
               
chr4:50018985-50018674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 299
               

               
Conread position:
               
67-364
               

               
Cow position:
               
chr4:45113827-45113512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-371
               

               
Cow position:
               
chr4:29834185-29834508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-372
               

               
Cow position:
               
chr4:19025808-19025484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 109
               

               
Conread position:
               
67-372
               

               
Cow position:
               
chr4:32658270-32657947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-374
               

               
Cow position:
               
chr4:64875660-64875984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 255
               

               
Conread position:
               
67-384
               

               
Cow position:
               
chr4:34644173-34643837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 132
               

               
Conread position:
               
67-388
               

               
Cow position:
               
chr4:17819193-17818856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
67-388
               

               
Cow position:
               
chr4:60788816-60789156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
67-389
               

               
Cow position:
               
chr4:30307022-30306682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
67-391
               

               
Cow position:
               
chr4:11641012-11640672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:162644-162986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
25, 132
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:2190734-2190395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
190, 18
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:2590968-2590625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:3354382-3354039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:6395652-6395995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:6862641-6862295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:8377574-8377243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 218
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:10044205-10043862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:10136150-10136481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
153, 302
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:10425041-10425384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:14967643-14967986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:15802945-15803288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:17032937-17032594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:17091396-17091057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 107
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:18335383-18335041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 251
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:18738180-18737837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:20616150-20615810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 265
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:22086374-22086031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:26398938-26399281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 314
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:27337774-27338115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
18, 309
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:29189029-29188686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:30541725-30542068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:33069278-33068936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:37707591-37707248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:38152695-38152352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:38864615-38864957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 220
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:42596805-42597148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:42865571-42865910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 291
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:48411346-48411003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:50860453-50860110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:52601663-52602005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:54339373-54339030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:58292294-58292638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:58748209-58748552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:59781299-59781641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 318
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:60579566-60579223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:61816840-61816493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 267
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:64156292-64156635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-417
               

               
Cow position:
               
chr4:63195019-63194650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
7, 355
               

               
Conread position:
               
67-418
               

               
Cow position:
               
chr4:36899939-36900308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
67-426
               

               
Cow position:
               
chr4:2562812-2563188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 334
               

               
Conread position:
               
67-428
               

               
Cow position:
               
chr4:21553576-21553198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
16, 346
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr4:7584677-7585058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr4:9041511-9041892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr4:15500896-15500515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
22, 345
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr4:19575091-19575457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 177
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr4:40218382-40218759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
23, 349
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr4:46585343-46584958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr4:56191601-56191220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr4:57240055-57240431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 278
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr4:57493723-57493342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 291
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr4:59383901-59383518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 347
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr4:63102206-63102587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-433
               

               
Cow position:
               
chr4:46021154-46021536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:2253754-2254137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
22, 293
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:4772275-4772661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:6150832-6150446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:6547126-6546740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
22, 314
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:7138802-7138416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:9005883-9006269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:10122970-10123356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:10420805-10421191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
17, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:13764331-13763945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:13834906-13835292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:14047988-14048374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:14386711-14386326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 354
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:15618258-15618644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:16000734-16000348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 354
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:16765942-16765556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:17752373-17752759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:18672788-18673174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:18684513-18684127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:21044600-21044214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:24094362-24093976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:25045492-25045106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:26347480-26347095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:26538228-26538614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:27918891-27918505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:28456469-28456083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:28855674-28856060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:28864838-28864452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:29559965-29559579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:30474944-30475330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:33171703-33172090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
22, 354
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:33554216-33553830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:36350417-36350803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:37584304-37583918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:38834550-38834164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:41429668-41429282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:44700325-44699939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:45105394-45105009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
25, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:45377023-45377409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
22, 319
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:46253912-46253526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
23, 345
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:47020866-47021252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:47114552-47114935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 86
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:47116867-47117251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
149, 351
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:48894137-48894523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:49176050-49176436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:58577103-58576717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
25, 354
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:62654078-62653692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr4:65198237-65197851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
22, 353
               

               
Conread position:
               
67-452
               

               
Cow position:
               
chr4:652591-652978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
67-613
               

               
Cow position:
               
chr4:7080453-7081019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
69-392
               

               
Cow position:
               
chr4:44051836-44052178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
69-437
               

               
Cow position:
               
chr4:34996784-34997166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
69-607
               

               
Cow position:
               
chr4:48485602-48486159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
69-640
               

               
Cow position:
               
chr4:30973949-30974528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
71-228
               

               
Cow position:
               
chr4:9519908-9520064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
71-606
               

               
Cow position:
               
chr4:19434872-19435412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 152
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr4:54161496-54161343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
72-369
               

               
Cow position:
               
chr4:2671651-2671351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
191, 7
               

               
Conread position:
               
72-392
               

               
Cow position:
               
chr4:10397600-10397936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
72-392
               

               
Cow position:
               
chr4:14814139-14814473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
88, 111
               

               
Conread position:
               
72-392
               

               
Cow position:
               
chr4:41598929-41599267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
72-415
               

               
Cow position:
               
chr4:22073690-22073349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
72-437
               

               
Cow position:
               
chr4:604489-604110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
145, 346
               

               
Conread position:
               
72-437
               

               
Cow position:
               
chr4:9357978-9358347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
186, 336
               

               
Conread position:
               
72-438
               

               
Cow position:
               
chr4:22236862-22236489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 60
               

               
Conread position:
               
72-542
               

               
Cow position:
               
chr4:65816079-65815614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 223
               

               
Conread position:
               
72-605
               

               
Cow position:
               
chr4:4185734-4186279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 88
               

               
Conread position:
               
72-638
               

               
Cow position:
               
chr4:7429933-7430505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 103
               

               
Conread position:
               
73-326
               

               
Cow position:
               
chr4:69017982-69018245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
183, 149
               

               
Conread position:
               
73-461
               

               
Cow position:
               
chr4:52017235-52016844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 24
               

               
Conread position:
               
73-570
               

               
Cow position:
               
chr4:19541735-19542254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
75-211
               

               
Cow position:
               
chr4:27664519-27664654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
75-255
               

               
Cow position:
               
chr4:67706431-67706608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
118, 104
               

               
Conread position:
               
75-372
               

               
Cow position:
               
chr4:4981590-4981905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
173, 22
               

               
Conread position:
               
75-372
               

               
Cow position:
               
chr4:7249953-7249645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
75-398
               

               
Cow position:
               
chr4:55271141-55270808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
75-509
               

               
Cow position:
               
chr4:26323358-26323801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
182, 97
               

               
Conread position:
               
75-571
               

               
Cow position:
               
chr4:42672787-42673297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 276
               

               
Conread position:
               
76-180
               

               
Cow position:
               
chr4:49089110-49089214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-205
               

               
Cow position:
               
chr4:19493137-19493266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-220
               

               
Cow position:
               
chr4:4283307-4283163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-255
               

               
Cow position:
               
chr4:20644200-20644379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-255
               

               
Cow position:
               
chr4:38706339-38706161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
25, 150
               

               
Conread position:
               
76-255
               

               
Cow position:
               
chr4:45499928-45499750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
76-296
               

               
Cow position:
               
chr4:1027651-1027436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
76-299
               

               
Cow position:
               
chr4:34223509-34223743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
179, 151
               

               
Conread position:
               
76-324
               

               
Cow position:
               
chr4:9697-9442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 119
               

               
Conread position:
               
76-324
               

               
Cow position:
               
chr4:17585401-17585143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
76-326
               

               
Cow position:
               
chr4:39273825-39274089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
120, 208
               

               
Conread position:
               
76-326
               

               
Cow position:
               
chr4:56226510-56226765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
111, 30
               

               
Conread position:
               
76-327
               

               
Cow position:
               
chr4:26009063-26009329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
76-331
               

               
Cow position:
               
chr4:1436098-1435839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 112
               

               
Conread position:
               
76-358
               

               
Cow position:
               
chr4:41097530-41097828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
76-361
               

               
Cow position:
               
chr4:29813917-29813626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 210
               

               
Conread position:
               
76-364
               

               
Cow position:
               
chr4:7258809-7258508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
183, 73
               

               
Conread position:
               
76-368
               

               
Cow position:
               
chr4:69405988-69406291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
181, 65
               

               
Conread position:
               
76-372
               

               
Cow position:
               
chr4:46176851-46176535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 277
               

               
Conread position:
               
76-374
               

               
Cow position:
               
chr4:11091063-11090768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 85
               

               
Conread position:
               
76-375
               

               
Cow position:
               
chr4:23655611-23655924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
180, 153
               

               
Conread position:
               
76-388
               

               
Cow position:
               
chr4:18602640-18602315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
154, 290
               

               
Conread position:
               
76-389
               

               
Cow position:
               
chr4:62157888-62158214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
38, 104
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr4:11924775-11924448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
181, 141
               

               
Conread position:
               
76-395
               

               
Cow position:
               
chr4:66918513-66918857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
116, 274
               

               
Conread position:
               
76-400
               

               
Cow position:
               
chr4:4672716-4672379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
181, 112
               

               
Conread position:
               
76-407
               

               
Cow position:
               
chr4:49213101-49212756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
76-413
               

               
Cow position:
               
chr4:61391582-61391239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 44
               

               
Conread position:
               
76-419
               

               
Cow position:
               
chr4:65116595-65116229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
76-421
               

               
Cow position:
               
chr4:10837744-10837412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
104, 189
               

               
Conread position:
               
76-422
               

               
Cow position:
               
chr4:28613438-28613800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 267
               

               
Conread position:
               
76-424
               

               
Cow position:
               
chr4:11918053-11917705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 84
               

               
Conread position:
               
76-424
               

               
Cow position:
               
chr4:54501832-54501473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
76-426
               

               
Cow position:
               
chr4:21588989-21588620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
114, 30
               

               
Conread position:
               
76-431
               

               
Cow position:
               
chr4:16602438-16602069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 153
               

               
Conread position:
               
76-431
               

               
Cow position:
               
chr4:46258098-46258465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
110, 163
               

               
Conread position:
               
76-432
               

               
Cow position:
               
chr4:18282379-18282749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
140, 342
               

               
Conread position:
               
76-433
               

               
Cow position:
               
chr4:11025744-11025373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
70, 104
               

               
Conread position:
               
76-437
               

               
Cow position:
               
chr4:8439826-8439452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
179, 336
               

               
Conread position:
               
76-437
               

               
Cow position:
               
chr4:30690355-30690703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
185, 70
               

               
Conread position:
               
76-438
               

               
Cow position:
               
chr4:5984429-5984055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 307
               

               
Conread position:
               
76-438
               

               
Cow position:
               
chr4:26175626-26175258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
168, 226
               

               
Conread position:
               
76-438
               

               
Cow position:
               
chr4:42480803-42481172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
119, 96
               

               
Conread position:
               
76-445
               

               
Cow position:
               
chr4:68362557-68362920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 90
               

               
Conread position:
               
76-446
               

               
Cow position:
               
chr4:19438062-19438462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 231
               

               
Conread position:
               
76-478
               

               
Cow position:
               
chr4:24458482-24458074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 148
               

               
Conread position:
               
76-489
               

               
Cow position:
               
chr4:37620270-37619848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 129
               

               
Conread position:
               
76-500
               

               
Cow position:
               
chr4:12464465-12464893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 20
               

               
Conread position:
               
76-512
               

               
Cow position:
               
chr4:27540238-27540683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 286
               

               
Conread position:
               
76-538
               

               
Cow position:
               
chr4:21257509-21257034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 96
               

               
Conread position:
               
76-547
               

               
Cow position:
               
chr4:12560644-12561139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
76-547
               

               
Cow position:
               
chr4:12903434-12903920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 96
               

               
Conread position:
               
76-552
               

               
Cow position:
               
chr4:44839266-44838792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 75
               

               
Conread position:
               
76-570
               

               
Cow position:
               
chr4:9815733-9815223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 97
               

               
Conread position:
               
76-570
               

               
Cow position:
               
chr4:54190725-54191209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 69
               

               
Conread position:
               
76-571
               

               
Cow position:
               
chr4:23526308-23526818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
109, 234
               

               
Conread position:
               
76-571
               

               
Cow position:
               
chr4:46477321-46476823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 107
               

               
Conread position:
               
76-605
               

               
Cow position:
               
chr4:4319525-4318993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 243
               

               
Conread position:
               
76-607
               

               
Cow position:
               
chr4:22101647-22101098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
179, 15
               

               
Conread position:
               
76-607
               

               
Cow position:
               
chr4:34166348-34165823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
183, 96
               

               
Conread position:
               
76-607
               

               
Cow position:
               
chr4:34383731-34383175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
76-607
               

               
Cow position:
               
chr4:46526617-46527167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 53
               

               
Conread position:
               
76-610
               

               
Cow position:
               
chr4:48152753-48152205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 263
               

               
Conread position:
               
76-624
               

               
Cow position:
               
chr4:21532012-21531462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
76-627
               

               
Cow position:
               
chr4:33971278-33970718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 32
               

               
Conread position:
               
76-629
               

               
Cow position:
               
chr4:13589712-13590270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
99, 27
               

               
Conread position:
               
76-637
               

               
Cow position:
               
chr4:10731837-10732413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 66
               

               
Conread position:
               
76-637
               

               
Cow position:
               
chr4:36840897-36841462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 96
               

               
Conread position:
               
76-637
               

               
Cow position:
               
chr4:51850816-51851404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 70
               

               
Conread position:
               
76-639
               

               
Cow position:
               
chr4:25197880-25197286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 146
               

               
Conread position:
               
76-640
               

               
Cow position:
               
chr4:61897915-61897358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 129
               

               
Conread position:
               
76-643
               

               
Cow position:
               
chr4:22138617-22138019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 81
               

               
Conread position:
               
76-644
               

               
Cow position:
               
chr4:3687542-3688127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 237
               

               
Conread position:
               
76-644
               

               
Cow position:
               
chr4:4084831-4084258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 80
               

               
Conread position:
               
76-644
               

               
Cow position:
               
chr4:13327337-13326751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 96
               

               
Conread position:
               
76-644
               

               
Cow position:
               
chr4:30779218-30778622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
173, 329
               

               
Conread position:
               
76-646
               

               
Cow position:
               
chr4:31136371-31136954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 54
               

               
Conread position:
               
76-647
               

               
Cow position:
               
chr4:1014687-1015275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 93
               

               
Conread position:
               
77-249
               

               
Cow position:
               
chr4:10993925-10993761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
77-381
               

               
Cow position:
               
chr4:23573161-23573483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
180, 89
               

               
Conread position:
               
77-392
               

               
Cow position:
               
chr4:46711030-46710700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
77-404
               

               
Cow position:
               
chr4:23567754-23568101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
77-437
               

               
Cow position:
               
chr4:6231934-6232308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
139, 341
               

               
Conread position:
               
77-437
               

               
Cow position:
               
chr4:15793672-15794049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 344
               

               
Conread position:
               
77-437
               

               
Cow position:
               
chr4:44663105-44662731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
139, 341
               

               
Conread position:
               
77-445
               

               
Cow position:
               
chr4:48137534-48137908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 8
               

               
Conread position:
               
77-446
               

               
Cow position:
               
chr4:65826247-65825847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 62
               

               
Conread position:
               
78-255
               

               
Cow position:
               
chr4:64613-64438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
78-326
               

               
Cow position:
               
chr4:1368203-1367967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
78-326
               

               
Cow position:
               
chr4:5441086-5440821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
78-373
               

               
Cow position:
               
chr4:10026116-10026406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
183, 62
               

               
Conread position:
               
78-392
               

               
Cow position:
               
chr4:1007464-1007795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
12, 244
               

               
Conread position:
               
78-395
               

               
Cow position:
               
chr4:5610450-5610124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 99
               

               
Conread position:
               
78-422
               

               
Cow position:
               
chr4:35144867-35145227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
78-433
               

               
Cow position:
               
chr4:61999833-61999463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
179, 106
               

               
Conread position:
               
78-437
               

               
Cow position:
               
chr4:120115-119758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
11, 96
               

               
Conread position:
               
78-437
               

               
Cow position:
               
chr4:18975881-18975506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
14, 342
               

               
Conread position:
               
78-437
               

               
Cow position:
               
chr4:48736453-48736828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
14, 334
               

               
Conread position:
               
78-437
               

               
Cow position:
               
chr4:62453413-62453038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 342
               

               
Conread position:
               
79-208
               

               
Cow position:
               
chr4:55395103-55395230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr4:6457159-6457018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr4:10333369-10333229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr4:23150081-23149940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-220
               

               
Cow position:
               
chr4:25595910-25595769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-225
               

               
Cow position:
               
chr4:12605305-12605162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
79-225
               

               
Cow position:
               
chr4:31484138-31483990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
79-247
               

               
Cow position:
               
chr4:1491239-1491074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 77
               

               
Conread position:
               
79-252
               

               
Cow position:
               
chr4:3893353-3893521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
79-255
               

               
Cow position:
               
chr4:14754869-14754692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
79-255
               

               
Cow position:
               
chr4:22366750-22366923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
79-255
               

               
Cow position:
               
chr4:47280505-47280332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
79-255
               

               
Cow position:
               
chr4:54170990-54171159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
79-255
               

               
Cow position:
               
chr4:61450388-61450564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-303
               

               
Cow position:
               
chr4:19835636-19835414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
188, 93
               

               
Conread position:
               
79-307
               

               
Cow position:
               
chr4:50194112-50194341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
189, 177
               

               
Conread position:
               
79-319
               

               
Cow position:
               
chr4:10041649-10041908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
100, 152
               

               
Conread position:
               
79-323
               

               
Cow position:
               
chr4:607183-607442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
79-326
               

               
Cow position:
               
chr4:11191584-11191841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
141, 108
               

               
Conread position:
               
79-326
               

               
Cow position:
               
chr4:49409085-49409347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
79-342
               

               
Cow position:
               
chr4:21162313-21162556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
64, 155
               

               
Conread position:
               
79-345
               

               
Cow position:
               
chr4:42404476-42404204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
79-351
               

               
Cow position:
               
chr4:11930544-11930830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
79-351
               

               
Cow position:
               
chr4:44449966-44449679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
137, 93
               

               
Conread position:
               
79-358
               

               
Cow position:
               
chr4:61304800-61304509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
176, 84
               

               
Conread position:
               
79-359
               

               
Cow position:
               
chr4:55508799-55508503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
103, 32
               

               
Conread position:
               
79-360
               

               
Cow position:
               
chr4:1061307-1061025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 24
               

               
Conread position:
               
79-361
               

               
Cow position:
               
chr4:13142903-13142629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
182, 62
               

               
Conread position:
               
79-364
               

               
Cow position:
               
chr4:56409802-56410104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 122
               

               
Conread position:
               
79-365
               

               
Cow position:
               
chr4:10038902-10039201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
163, 19
               

               
Conread position:
               
79-371
               

               
Cow position:
               
chr4:26163352-26163050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
110, 51
               

               
Conread position:
               
79-374
               

               
Cow position:
               
chr4:64039732-64040027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
79-374
               

               
Cow position:
               
chr4:69343337-69343635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
189, 43
               

               
Conread position:
               
79-380
               

               
Cow position:
               
chr4:14230005-14229686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
151, 317
               

               
Conread position:
               
79-384
               

               
Cow position:
               
chr4:61399806-61399502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
102, 53
               

               
Conread position:
               
79-388
               

               
Cow position:
               
chr4:48030435-48030760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
79-388
               

               
Cow position:
               
chr4:54757694-54757374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
155, 240
               

               
Conread position:
               
79-388
               

               
Cow position:
               
chr4:56852520-56852843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
178, 93
               

               
Conread position:
               
79-391
               

               
Cow position:
               
chr4:34713390-34713718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr4:5874574-5874897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
70, 78
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr4:10432361-10432695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr4:10553821-10554150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr4:13979618-13979944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
140, 203
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr4:17616316-17616644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
141, 303
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr4:26874329-26874001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
141, 87
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr4:27178400-27178729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr4:30220060-30219731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr4:36025693-36025377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
182, 69
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr4:36971314-36970998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
182, 77
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr4:39422173-39422502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 53
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr4:43316078-43315750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
160, 213
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr4:60124158-60123828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
151, 229
               

               
Conread position:
               
79-392
               

               
Cow position:
               
chr4:63431047-63431378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
79-394
               

               
Cow position:
               
chr4:15872101-15871773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
178, 76
               

               
Conread position:
               
79-398
               

               
Cow position:
               
chr4:23565134-23565467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
182, 116
               

               
Conread position:
               
79-399
               

               
Cow position:
               
chr4:7501506-7501819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 126
               

               
Conread position:
               
79-399
               

               
Cow position:
               
chr4:46708907-46708574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
147, 93
               

               
Conread position:
               
79-399
               

               
Cow position:
               
chr4:57931521-57931864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
86, 153
               

               
Conread position:
               
79-400
               

               
Cow position:
               
chr4:53830052-53830389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
79-400
               

               
Cow position:
               
chr4:58834779-58834454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
177, 69
               

               
Conread position:
               
79-404
               

               
Cow position:
               
chr4:2422201-2422539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
79-408
               

               
Cow position:
               
chr4:68944556-68944211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
182, 279
               

               
Conread position:
               
79-409
               

               
Cow position:
               
chr4:34171949-34171610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 293
               

               
Conread position:
               
79-409
               

               
Cow position:
               
chr4:57555586-57555933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
79-415
               

               
Cow position:
               
chr4:25906705-25906360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
79-420
               

               
Cow position:
               
chr4:12237671-12237317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
147, 327
               

               
Conread position:
               
79-420
               

               
Cow position:
               
chr4:28151151-28151492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
182, 83
               

               
Conread position:
               
79-421
               

               
Cow position:
               
chr4:69515498-69515162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
182, 136
               

               
Conread position:
               
79-422
               

               
Cow position:
               
chr4:49992707-49993046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 102
               

               
Conread position:
               
79-423
               

               
Cow position:
               
chr4:49745248-49745595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
79-426
               

               
Cow position:
               
chr4:6034471-6034107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
110, 104
               

               
Conread position:
               
79-429
               

               
Cow position:
               
chr4:23303691-23303325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
79-431
               

               
Cow position:
               
chr4:30574076-30574432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 337
               

               
Conread position:
               
79-432
               

               
Cow position:
               
chr4:11901940-11901578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 93
               

               
Conread position:
               
79-432
               

               
Cow position:
               
chr4:53832671-53833029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 270
               

               
Conread position:
               
79-437
               

               
Cow position:
               
chr4:19534104-19534476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
149, 339
               

               
Conread position:
               
79-437
               

               
Cow position:
               
chr4:24119291-24118919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 311
               

               
Conread position:
               
79-437
               

               
Cow position:
               
chr4:25865137-25865509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
137, 339
               

               
Conread position:
               
79-438
               

               
Cow position:
               
chr4:22051848-22051482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 117
               

               
Conread position:
               
79-438
               

               
Cow position:
               
chr4:35940375-35940018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
178, 73
               

               
Conread position:
               
79-438
               

               
Cow position:
               
chr4:37553424-37553050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 338
               

               
Conread position:
               
79-438
               

               
Cow position:
               
chr4:41441185-41441556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
178, 233
               

               
Conread position:
               
79-438
               

               
Cow position:
               
chr4:67444765-67445134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
152, 212
               

               
Conread position:
               
79-445
               

               
Cow position:
               
chr4:22850100-22849720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 281
               

               
Conread position:
               
79-446
               

               
Cow position:
               
chr4:56233312-56233679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 87
               

               
Conread position:
               
79-448
               

               
Cow position:
               
chr4:13877819-13878180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
206, 93
               

               
Conread position:
               
79-478
               

               
Cow position:
               
chr4:19497627-19497234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 94
               

               
Conread position:
               
79-489
               

               
Cow position:
               
chr4:32260227-32259805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 278
               

               
Conread position:
               
79-511
               

               
Cow position:
               
chr4:14470948-14470507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 141
               

               
Conread position:
               
79-518
               

               
Cow position:
               
chr4:9136897-9137349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 141
               

               
Conread position:
               
79-530
               

               
Cow position:
               
chr4:17474042-17474521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
99, 162
               

               
Conread position:
               
79-544
               

               
Cow position:
               
chr4:38952179-38952649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 147
               

               
Conread position:
               
79-545
               

               
Cow position:
               
chr4:8413489-8413026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 29
               

               
Conread position:
               
79-545
               

               
Cow position:
               
chr4:24002349-24001870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 246
               

               
Conread position:
               
79-547
               

               
Cow position:
               
chr4:53100429-53100900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 26
               

               
Conread position:
               
79-564
               

               
Cow position:
               
chr4:51783791-51784294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 321
               

               
Conread position:
               
79-566
               

               
Cow position:
               
chr4:25879018-25879506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 31
               

               
Conread position:
               
79-566
               

               
Cow position:
               
chr4:33433636-33433138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 108
               

               
Conread position:
               
79-571
               

               
Cow position:
               
chr4:36577974-36577506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
380, 119
               

               
Conread position:
               
79-588
               

               
Cow position:
               
chr4:33097338-33096841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 50
               

               
Conread position:
               
79-590
               

               
Cow position:
               
chr4:59056218-59055723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 8
               

               
Conread position:
               
79-593
               

               
Cow position:
               
chr4:38934999-38935510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
79-602
               

               
Cow position:
               
chr4:6653367-6653882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
171, 22
               

               
Conread position:
               
79-606
               

               
Cow position:
               
chr4:18974060-18974588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
180, 91
               

               
Conread position:
               
79-607
               

               
Cow position:
               
chr4:7965028-7964484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 93
               

               
Conread position:
               
79-607
               

               
Cow position:
               
chr4:49794302-49794813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 50
               

               
Conread position:
               
79-608
               

               
Cow position:
               
chr4:15635823-15635286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 173
               

               
Conread position:
               
79-618
               

               
Cow position:
               
chr4:38999053-38999603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
79-626
               

               
Cow position:
               
chr4:12591590-12591025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 65
               

               
Conread position:
               
79-628
               

               
Cow position:
               
chr4:26400577-26401143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 146
               

               
Conread position:
               
79-637
               

               
Cow position:
               
chr4:53134243-53134788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 69
               

               
Conread position:
               
79-639
               

               
Cow position:
               
chr4:9445069-9444479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 148
               

               
Conread position:
               
79-639
               

               
Cow position:
               
chr4:53207928-53208481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 80
               

               
Conread position:
               
79-641
               

               
Cow position:
               
chr4:58248032-58248602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
79-644
               

               
Cow position:
               
chr4:53125757-53126311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 144
               

               
Conread position:
               
79-644
               

               
Cow position:
               
chr4:59871125-59871678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
180, 102
               

               
Conread position:
               
79-644
               

               
Cow position:
               
chr4:66173174-66172595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 93
               

               
Conread position:
               
80-374
               

               
Cow position:
               
chr4:16736122-16736434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
80-392
               

               
Cow position:
               
chr4:29529239-29528912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
177, 240
               

               
Conread position:
               
80-415
               

               
Cow position:
               
chr4:23382181-23381844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
6, 82
               

               
Conread position:
               
80-432
               

               
Cow position:
               
chr4:43063922-43064291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
142, 344
               

               
Conread position:
               
80-443
               

               
Cow position:
               
chr4:561024-561395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 33
               

               
Conread position:
               
80-545
               

               
Cow position:
               
chr4:22841971-22842442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 107
               

               
Conread position:
               
80-569
               

               
Cow position:
               
chr4:37703887-37704384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 142
               

               
Conread position:
               
80-638
               

               
Cow position:
               
chr4:21392175-21391624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 16
               

               
Conread position:
               
80-644
               

               
Cow position:
               
chr4:13694047-13693476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 16
               

               
Conread position:
               
81-215
               

               
Cow position:
               
chr4:36548221-36548087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-220
               

               
Cow position:
               
chr4:42328777-42328638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-225
               

               
Cow position:
               
chr4:9375513-9375369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-225
               

               
Cow position:
               
chr4:61170107-61169963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
99, 92
               

               
Conread position:
               
81-225
               

               
Cow position:
               
chr4:68844830-68844974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-226
               

               
Cow position:
               
chr4:8414738-8414593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-226
               

               
Cow position:
               
chr4:33020064-33019919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-253
               

               
Cow position:
               
chr4:41186743-41186573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
154, 91
               

               
Conread position:
               
81-314
               

               
Cow position:
               
chr4:43027657-43027419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
81-328
               

               
Cow position:
               
chr4:27166948-27167206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
176, 106
               

               
Conread position:
               
81-330
               

               
Cow position:
               
chr4:20025216-20025481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-346
               

               
Cow position:
               
chr4:33372190-33371909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
81-372
               

               
Cow position:
               
chr4:47264357-47264664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-388
               

               
Cow position:
               
chr4:16642394-16642713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-388
               

               
Cow position:
               
chr4:38584457-38584782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
81-389
               

               
Cow position:
               
chr4:18331666-18331991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-391
               

               
Cow position:
               
chr4:17500327-17500001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr4:359462-359790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr4:8678382-8678710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr4:16859142-16858819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
153, 309
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr4:17282943-17282615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr4:31955923-31955599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr4:42381732-42381405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr4:51859872-51860201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr4:54571985-54571657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr4:59838880-59839207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr4:60677154-60676827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-420
               

               
Cow position:
               
chr4:60856303-60856658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
81-425
               

               
Cow position:
               
chr4:14353059-14352694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
153, 161
               

               
Conread position:
               
81-432
               

               
Cow position:
               
chr4:5883055-5883420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
99, 91
               

               
Conread position:
               
81-432
               

               
Cow position:
               
chr4:18599821-18599456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-432
               

               
Cow position:
               
chr4:46737859-46737494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr4:28147650-28147282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 311
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr4:29515561-29515932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
135, 338
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr4:30435838-30436209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
67, 338
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr4:31535395-31535765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
146, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr4:32405141-32405511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
135, 329
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr4:50802212-50802582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
135, 329
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr4:52186640-52187010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr4:54962424-54962794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
135, 337
               

               
Conread position:
               
81-437
               

               
Cow position:
               
chr4:62014377-62014011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 57
               

               
Conread position:
               
82-275
               

               
Cow position:
               
chr4:34314055-34313867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
82-300
               

               
Cow position:
               
chr4:15813718-15813497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
140, 172
               

               
Conread position:
               
82-392
               

               
Cow position:
               
chr4:16364902-16365228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
82-426
               

               
Cow position:
               
chr4:52771265-52771625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
175, 113
               

               
Conread position:
               
82-438
               

               
Cow position:
               
chr4:19558350-19558711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 140
               

               
Conread position:
               
82-500
               

               
Cow position:
               
chr4:19141918-19142328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 74
               

               
Conread position:
               
82-570
               

               
Cow position:
               
chr4:9795748-9795262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
186, 175
               

               
Conread position:
               
83-225
               

               
Cow position:
               
chr4:49559686-49559544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
83-255
               

               
Cow position:
               
chr4:44049811-44049978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
83-505
               

               
Cow position:
               
chr4:51903225-51903662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 172
               

               
Conread position:
               
83-640
               

               
Cow position:
               
chr4:24372227-24371664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
172, 194
               

               
Conread position:
               
85-392
               

               
Cow position:
               
chr4:3129446-3129765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 179
               

               
Conread position:
               
85-437
               

               
Cow position:
               
chr4:43086446-43086081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
131, 291
               

               
Conread position:
               
85-461
               

               
Cow position:
               
chr4:480381-479996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 336
               

               
Conread position:
               
85-514
               

               
Cow position:
               
chr4:24744789-24744340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
85-601
               

               
Cow position:
               
chr4:3388174-3388704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
103, 180
               

               
Conread position:
               
86-255
               

               
Cow position:
               
chr4:54479551-54479388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
86-394
               

               
Cow position:
               
chr4:60907667-60907343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
86-446
               

               
Cow position:
               
chr4:11671081-11671449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 75
               

               
Conread position:
               
86-451
               

               
Cow position:
               
chr4:43909398-43909747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
177, 66
               

               
Conread position:
               
90-225
               

               
Cow position:
               
chr4:5231623-5231758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
90-392
               

               
Cow position:
               
chr4:29569185-29568867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
91-330
               

               
Cow position:
               
chr4:12657886-12658139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
131, 181
               

               
Conread position:
               
91-345
               

               
Cow position:
               
chr4:29710410-29710139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 264
               

               
Conread position:
               
91-389
               

               
Cow position:
               
chr4:63266430-63266744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
91-607
               

               
Cow position:
               
chr4:11100031-11099498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 17
               

               
Conread position:
               
91-636
               

               
Cow position:
               
chr4:68233621-68234158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 51
               

               
Conread position:
               
92-437
               

               
Cow position:
               
chr4:42399626-42399267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
124, 326
               

               
Conread position:
               
93-229
               

               
Cow position:
               
chr4:11921551-11921416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
93-409
               

               
Cow position:
               
chr4:3990988-3990661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
168, 129
               

               
Conread position:
               
93-421
               

               
Cow position:
               
chr4:44665735-44665397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 255
               

               
Conread position:
               
96-449
               

               
Cow position:
               
chr4:22216018-22215653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
99-566
               

               
Cow position:
               
chr4:14944680-14945178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
100-249
               

               
Cow position:
               
chr4:57667800-57667947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
100-392
               

               
Cow position:
               
chr4:17919145-17918838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
120, 22
               

               
Conread position:
               
100-644
               

               
Cow position:
               
chr4:13668972-13668420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 72
               

               
Conread position:
               
101-319
               

               
Cow position:
               
chr4:16814128-16813910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
160, 71
               

               
Conread position:
               
101-432
               

               
Cow position:
               
chr4:33935362-33935705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
138, 308
               

               
Conread position:
               
101-639
               

               
Cow position:
               
chr4:15904743-15905299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 82
               

               
Conread position:
               
102-312
               

               
Cow position:
               
chr4:20117204-20116990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
159, 37
               

               
Conread position:
               
102-358
               

               
Cow position:
               
chr4:26469288-26469556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
102-375
               

               
Cow position:
               
chr4:14742902-14743189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
102-375
               

               
Cow position:
               
chr4:22743972-22744252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
157, 70
               

               
Conread position:
               
102-381
               

               
Cow position:
               
chr4:1915932-1915644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
159, 79
               

               
Conread position:
               
102-392
               

               
Cow position:
               
chr4:10533866-10533562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
114, 196
               

               
Conread position:
               
102-398
               

               
Cow position:
               
chr4:18489749-18489435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
84, 23
               

               
Conread position:
               
102-398
               

               
Cow position:
               
chr4:42232312-42232608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 6
               

               
Conread position:
               
102-461
               

               
Cow position:
               
chr4:47056668-47057049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
102-539
               

               
Cow position:
               
chr4:17112235-17111783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 397
               

               
Conread position:
               
102-545
               

               
Cow position:
               
chr4:22528738-22528291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
149, 30
               

               
Conread position:
               
102-570
               

               
Cow position:
               
chr4:8947041-8947508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 167
               

               
Conread position:
               
102-601
               

               
Cow position:
               
chr4:4085486-4084952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
102-607
               

               
Cow position:
               
chr4:28836172-28836701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
14, 285
               

               
Conread position:
               
102-644
               

               
Cow position:
               
chr4:40414988-40414424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 270
               

               
Conread position:
               
103-228
               

               
Cow position:
               
chr4:6459921-6459797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
103-364
               

               
Cow position:
               
chr4:58283453-58283178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
103-383
               

               
Cow position:
               
chr4:65168361-65168071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
154, 79
               

               
Conread position:
               
103-404
               

               
Cow position:
               
chr4:61215353-61215042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
103-407
               

               
Cow position:
               
chr4:31634901-31634610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
174, 80
               

               
Conread position:
               
104-445
               

               
Cow position:
               
chr4:65891647-65891988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
157, 33
               

               
Conread position:
               
104-610
               

               
Cow position:
               
chr4:23647197-23646704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 18
               

               
Conread position:
               
105-258
               

               
Cow position:
               
chr4:30170730-30170581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
105-428
               

               
Cow position:
               
chr4:13832974-13832629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
75, 226
               

               
Conread position:
               
106-255
               

               
Cow position:
               
chr4:68941802-68941653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
106-321
               

               
Cow position:
               
chr4:62825843-62825635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
106-422
               

               
Cow position:
               
chr4:7851-7516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
106-438
               

               
Cow position:
               
chr4:19313652-19314001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 116
               

               
Conread position:
               
106-632
               

               
Cow position:
               
chr4:1495754-1495221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 86
               

               
Conread position:
               
106-638
               

               
Cow position:
               
chr4:21064680-21065218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 122
               

               
Conread position:
               
107-285
               

               
Cow position:
               
chr4:1499497-1499320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
152, 48
               

               
Conread position:
               
107-362
               

               
Cow position:
               
chr4:2681016-2681269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
217, 65
               

               
Conread position:
               
108-246
               

               
Cow position:
               
chr4:6413589-6413454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
108-391
               

               
Cow position:
               
chr4:23318927-23318629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
112, 201
               

               
Conread position:
               
108-432
               

               
Cow position:
               
chr4:44030020-44029686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
148, 272
               

               
Conread position:
               
108-509
               

               
Cow position:
               
chr4:11187108-11187512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
89, 34
               

               
Conread position:
               
108-647
               

               
Cow position:
               
chr4:52748811-52748248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
109-300
               

               
Cow position:
               
chr4:68429739-68429929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
159, 108
               

               
Conread position:
               
110-255
               

               
Cow position:
               
chr4:17186868-17186726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
110-490
               

               
Cow position:
               
chr4:285307-285683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
110-509
               

               
Cow position:
               
chr4:19265224-19265634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 112
               

               
Conread position:
               
110-571
               

               
Cow position:
               
chr4:10905805-10905335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
176, 26
               

               
Conread position:
               
110-644
               

               
Cow position:
               
chr4:44496037-44496560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
59, 66
               

               
Conread position:
               
110-644
               

               
Cow position:
               
chr4:60897622-60897088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 327
               

               
Conread position:
               
112-455
               

               
Cow position:
               
chr4:31023099-31023458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
78, 40
               

               
Conread position:
               
112-570
               

               
Cow position:
               
chr4:44782027-44782494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 238
               

               
Conread position:
               
112-573
               

               
Cow position:
               
chr4:45574-46027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
131, 60
               

               
Conread position:
               
112-644
               

               
Cow position:
               
chr4:62983884-62983359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 78
               

               
Conread position:
               
113-648
               

               
Cow position:
               
chr4:42424146-42423599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 29
               

               
Conread position:
               
114-642
               

               
Cow position:
               
chr4:56240191-56239662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 223
               

               
Conread position:
               
115-431
               

               
Cow position:
               
chr4:37470210-37470535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
134, 57
               

               
Conread position:
               
115-607
               

               
Cow position:
               
chr4:10916181-10915669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 269
               

               
Conread position:
               
116-423
               

               
Cow position:
               
chr4:45239934-45240245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
116-638
               

               
Cow position:
               
chr4:49159110-49158600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
175, 29
               

               
Conread position:
               
117-255
               

               
Cow position:
               
chr4:54111214-54111347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
117-417
               

               
Cow position:
               
chr4:10016924-10016631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
117-426
               

               
Cow position:
               
chr4:51023373-51023062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
8, 107
               

               
Conread position:
               
117-607
               

               
Cow position:
               
chr4:68076870-68076376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
126, 105
               

               
Conread position:
               
119-580
               

               
Cow position:
               
chr4:68764177-68764651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
144, 131
               

               
Conread position:
               
122-424
               

               
Cow position:
               
chr4:60433200-60432882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 314
               

               
Conread position:
               
122-438
               

               
Cow position:
               
chr4:1060599-1060280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
141, 259
               

               
Conread position:
               
122-543
               

               
Cow position:
               
chr4:47351470-47351896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
107, 269
               

               
Conread position:
               
122-594
               

               
Cow position:
               
chr4:54455662-54455198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
123-403
               

               
Cow position:
               
chr4:63365710-63365422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 49
               

               
Conread position:
               
123-644
               

               
Cow position:
               
chr4:10412045-10412563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 59
               

               
Conread position:
               
124-644
               

               
Cow position:
               
chr4:275131-275643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 42
               

               
Conread position:
               
126-255
               

               
Cow position:
               
chr4:52979703-52979575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
126-322
               

               
Cow position:
               
chr4:5577823-5577614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
135, 77
               

               
Conread position:
               
127-363
               

               
Cow position:
               
chr4:4736705-4736946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 97
               

               
Conread position:
               
127-635
               

               
Cow position:
               
chr4:509230-508717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 239
               

               
Conread position:
               
127-636
               

               
Cow position:
               
chr4:22010390-22009867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 75
               

               
Conread position:
               
129-438
               

               
Cow position:
               
chr4:22741722-22741426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
270, 106
               

               
Conread position:
               
130-447
               

               
Cow position:
               
chr4:23570468-23570797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
127, 288
               

               
Conread position:
               
130-570
               

               
Cow position:
               
chr4:570467-570912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
64, 96
               

               
Conread position:
               
131-392
               

               
Cow position:
               
chr4:21064329-21064061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
134, 44
               

               
Conread position:
               
131-509
               

               
Cow position:
               
chr4:57584554-57584181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
132-607
               

               
Cow position:
               
chr4:37915656-37915175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 80
               

               
Conread position:
               
133-546
               

               
Cow position:
               
chr4:12048922-12049344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 46
               

               
Conread position:
               
134-357
               

               
Cow position:
               
chr4:21246888-21246654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
127, 5
               

               
Conread position:
               
135-424
               

               
Cow position:
               
chr4:59833611-59833922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
32, 165
               

               
Conread position:
               
136-417
               

               
Cow position:
               
chr4:19561372-19561652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
127, 70
               

               
Conread position:
               
136-438
               

               
Cow position:
               
chr4:23060330-23060007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
7, 285
               

               
Conread position:
               
136-640
               

               
Cow position:
               
chr4:37935604-37935098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 206
               

               
Conread position:
               
138-567
               

               
Cow position:
               
chr4:45738800-45738358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 34
               

               
Conread position:
               
139-605
               

               
Cow position:
               
chr4:19597634-19597171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
140-359
               

               
Cow position:
               
chr4:17200961-17201181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
121, 57
               

               
Conread position:
               
140-518
               

               
Cow position:
               
chr4:19007721-19008116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
142-438
               

               
Cow position:
               
chr4:32827436-32827131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 30
               

               
Conread position:
               
142-509
               

               
Cow position:
               
chr4:12033950-12034327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
142-628
               

               
Cow position:
               
chr4:23599856-23600351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
147-400
               

               
Cow position:
               
chr4:69305344-69305602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
120, 75
               

               
Conread position:
               
149-363
               

               
Cow position:
               
chr4:47315031-47314821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
140, 54
               

               
Conread position:
               
152-622
               

               
Cow position:
               
chr4:45662807-45662325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 148
               

               
Conread position:
               
152-644
               

               
Cow position:
               
chr4:23451403-23450879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
109, 254
               

               
Conread position:
               
163-415
               

               
Cow position:
               
chr4:37828133-37827881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 138
               

               
Conread position:
               
166-420
               

               
Cow position:
               
chr4:27510978-27511235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
123, 91
               

               
Conread position:
               
168-545
               

               
Cow position:
               
chr4:19582907-19582521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 132
               

               
Conread position:
               
169-570
               

               
Cow position:
               
chr4:18095967-18095553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
172-519
               

               
Cow position:
               
chr4:620439-620064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
173-433
               

               
Cow position:
               
chr4:37342831-37343097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 189
               

               
Conread position:
               
173-647
               

               
Cow position:
               
chr4:51727797-51728275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 391
               

               
Conread position:
               
175-536
               

               
Cow position:
               
chr4:5999477-5999108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
178-420
               

               
Cow position:
               
chr4:51122775-51123030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 190
               

               
Conread position:
               
178-458
               

               
Cow position:
               
chr4:67408261-67408536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
178-637
               

               
Cow position:
               
chr4:23509309-23509789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 6
               

               
Conread position:
               
182-404
               

               
Cow position:
               
chr4:29237427-29237202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
83, 62
               

               
Conread position:
               
182-431
               

               
Cow position:
               
chr4:15439320-15439560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
142, 20
               

               
Conread position:
               
183-552
               

               
Cow position:
               
chr4:56570529-56570909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
184-570
               

               
Cow position:
               
chr4:46550109-46550504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 191
               

               
Conread position:
               
184-644
               

               
Cow position:
               
chr4:59785041-59785518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 217
               

               
Conread position:
               
185-431
               

               
Cow position:
               
chr4:19542520-19542777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 199
               

               
Conread position:
               
185-514
               

               
Cow position:
               
chr4:33612637-33612293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 254
               

               
Conread position:
               
185-630
               

               
Cow position:
               
chr4:27529839-27530311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
187-439
               

               
Cow position:
               
chr4:63119503-63119250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 110
               

               
Conread position:
               
188-546
               

               
Cow position:
               
chr4:47348561-47348924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 61
               

               
Conread position:
               
188-588
               

               
Cow position:
               
chr4:19316268-19315863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
69, 34
               

               
Conread position:
               
188-616
               

               
Cow position:
               
chr4:35981718-35982172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 353
               

               
Conread position:
               
190-394
               

               
Cow position:
               
chr4:42267011-42266806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
190-436
               

               
Cow position:
               
chr4:8801234-8801495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
190-486
               

               
Cow position:
               
chr4:20299000-20299312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 144
               

               
Conread position:
               
190-509
               

               
Cow position:
               
chr4:17052867-17052532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
190-539
               

               
Cow position:
               
chr4:33395957-33395607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
73, 32
               

               
Conread position:
               
190-563
               

               
Cow position:
               
chr4:2141477-2141851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
190-604
               

               
Cow position:
               
chr4:7571140-7571570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 149
               

               
Conread position:
               
190-640
               

               
Cow position:
               
chr4:28772336-28771870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 132
               

               
Conread position:
               
190-640
               

               
Cow position:
               
chr4:49629228-49629681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
195, 67
               

               
Conread position:
               
191-400
               

               
Cow position:
               
chr4:44073038-44072814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
191-404
               

               
Cow position:
               
chr4:54930684-54930463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
191-408
               

               
Cow position:
               
chr4:63349744-63349514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
191-415
               

               
Cow position:
               
chr4:45114874-45114638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
191-419
               

               
Cow position:
               
chr4:6630559-6630322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
65, 186
               

               
Conread position:
               
191-438
               

               
Cow position:
               
chr4:1405272-1405522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
191-505
               

               
Cow position:
               
chr4:51739971-51739660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 215
               

               
Conread position:
               
191-508
               

               
Cow position:
               
chr4:21371132-21371451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
191-510
               

               
Cow position:
               
chr4:11021919-11021589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 129
               

               
Conread position:
               
191-547
               

               
Cow position:
               
chr4:34337530-34337173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
191-631
               

               
Cow position:
               
chr4:46456315-46455878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
191-637
               

               
Cow position:
               
chr4:46597115-46597564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
191-639
               

               
Cow position:
               
chr4:44612735-44613198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
191-644
               

               
Cow position:
               
chr4:19744621-19745068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 280
               

               
Conread position:
               
192-570
               

               
Cow position:
               
chr4:34630635-34631019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
192-636
               

               
Cow position:
               
chr4:23847318-23846864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 118
               

               
Conread position:
               
192-643
               

               
Cow position:
               
chr4:4321273-4320791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 236
               

               
Conread position:
               
193-404
               

               
Cow position:
               
chr4:54667957-54667732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
64, 116
               

               
Conread position:
               
193-519
               

               
Cow position:
               
chr4:22345281-22344951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 175
               

               
Conread position:
               
193-552
               

               
Cow position:
               
chr4:5461119-5460759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
193-570
               

               
Cow position:
               
chr4:46591396-46591790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
194-403
               

               
Cow position:
               
chr4:21365149-21365361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
194-438
               

               
Cow position:
               
chr4:26746219-26746472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
194-442
               

               
Cow position:
               
chr4:46060681-46060936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
67, 182
               

               
Conread position:
               
194-461
               

               
Cow position:
               
chr4:14505265-14505007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
207, 67
               

               
Conread position:
               
194-565
               

               
Cow position:
               
chr4:34641994-34641612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
194-626
               

               
Cow position:
               
chr4:3340686-3341140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
197-365
               

               
Cow position:
               
chr4:10471961-10472140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
197-438
               

               
Cow position:
               
chr4:49424576-49424816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 151
               

               
Conread position:
               
197-448
               

               
Cow position:
               
chr4:47289808-47290077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
197-542
               

               
Cow position:
               
chr4:55395506-55395855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
60, 103
               

               
Conread position:
               
197-568
               

               
Cow position:
               
chr4:66548015-66547649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 66
               

               
Conread position:
               
197-607
               

               
Cow position:
               
chr4:23445313-23444875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
197-627
               

               
Cow position:
               
chr4:31348456-31348017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
59, 156
               

               
Conread position:
               
197-638
               

               
Cow position:
               
chr4:37691570-37691108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 172
               

               
Conread position:
               
197-643
               

               
Cow position:
               
chr4:10968647-10968190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 111
               

               
Conread position:
               
198-421
               

               
Cow position:
               
chr4:51866733-51866967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 120
               

               
Conread position:
               
198-547
               

               
Cow position:
               
chr4:41867183-41867534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 178
               

               
Conread position:
               
198-581
               

               
Cow position:
               
chr4:63096336-63095944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 83
               

               
Conread position:
               
198-607
               

               
Cow position:
               
chr4:1985388-1985814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 172
               

               
Conread position:
               
198-616
               

               
Cow position:
               
chr4:34310716-34310291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
61, 212
               

               
Conread position:
               
199-336
               

               
Cow position:
               
chr4:61066392-61066537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
199-403
               

               
Cow position:
               
chr4:657079-656859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
199-418
               

               
Cow position:
               
chr4:54975048-54975266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
199-426
               

               
Cow position:
               
chr4:51408225-51407993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
26, 151
               

               
Conread position:
               
199-644
               

               
Cow position:
               
chr4:3283709-3283247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 118
               

               
Conread position:
               
200-374
               

               
Cow position:
               
chr4:2536574-2536757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
201-399
               

               
Cow position:
               
chr4:12260040-12259830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 170
               

               
Conread position:
               
201-571
               

               
Cow position:
               
chr4:21874573-21874923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
201-607
               

               
Cow position:
               
chr4:31004662-31004249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
202-461
               

               
Cow position:
               
chr4:33357674-33357948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
202-570
               

               
Cow position:
               
chr4:45367479-45367861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
203-571
               

               
Cow position:
               
chr4:42922102-42921737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 178
               

               
Conread position:
               
203-593
               

               
Cow position:
               
chr4:63965247-63964842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 198
               

               
Conread position:
               
203-600
               

               
Cow position:
               
chr4:62921113-62920720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 159
               

               
Conread position:
               
204-427
               

               
Cow position:
               
chr4:40410375-40410150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 106
               

               
Conread position:
               
205-358
               

               
Cow position:
               
chr4:41292234-41292066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
205-438
               

               
Cow position:
               
chr4:5630007-5629762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 230
               

               
Conread position:
               
205-565
               

               
Cow position:
               
chr4:20157667-20157299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
205-565
               

               
Cow position:
               
chr4:49089540-49089901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
58, 121
               

               
Conread position:
               
205-644
               

               
Cow position:
               
chr4:12676559-12676994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
207-449
               

               
Cow position:
               
chr4:18577029-18576770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
207-638
               

               
Cow position:
               
chr4:14414598-14414162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 178
               

               
Conread position:
               
208-586
               

               
Cow position:
               
chr4:7808327-7808713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
17, 154
               

               
Conread position:
               
208-626
               

               
Cow position:
               
chr4:13255845-13256262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
209-398
               

               
Cow position:
               
chr4:53447916-53447718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 165
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr4:59565290-59565506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
50, 201
               

               
Conread position:
               
209-446
               

               
Cow position:
               
chr4:65538659-65538420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 207
               

               
Conread position:
               
210-590
               

               
Cow position:
               
chr4:19322328-19321935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 350
               

               
Conread position:
               
211-404
               

               
Cow position:
               
chr4:11496860-11496675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
180, 14
               

               
Conread position:
               
212-538
               

               
Cow position:
               
chr4:21233118-21232783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 204
               

               
Conread position:
               
212-644
               

               
Cow position:
               
chr4:29291275-29291703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 197
               

               
Conread position:
               
213-445
               

               
Cow position:
               
chr4:11897545-11897299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
214-399
               

               
Cow position:
               
chr4:46370565-46370766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
45, 183
               

               
Conread position:
               
214-642
               

               
Cow position:
               
chr4:26659060-26659496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 168
               

               
Conread position:
               
216-568
               

               
Cow position:
               
chr4:64192414-64192068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
129, 47
               

               
Conread position:
               
223-383
               

               
Cow position:
               
chr4:13871693-13871853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
224-373
               

               
Cow position:
               
chr4:20502419-20502569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 128
               

               
Conread position:
               
225-452
               

               
Cow position:
               
chr4:41908026-41907798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 162
               

               
Conread position:
               
232-398
               

               
Cow position:
               
chr4:44902216-44902386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
233-546
               

               
Cow position:
               
chr4:22860932-22860613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 107
               

               
Conread position:
               
235-514
               

               
Cow position:
               
chr4:44973418-44973700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 172
               

               
Conread position:
               
246-403
               

               
Cow position:
               
chr4:61148391-61148551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
246-432
               

               
Cow position:
               
chr4:46552520-46552340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
252-467
               

               
Cow position:
               
chr4:56435612-56435822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
132, 148
               

               
Conread position:
               
257-358
               

               
Cow position:
               
chr4:33062723-33062823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
257-627
               

               
Cow position:
               
chr4:9681110-9681486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
258-437
               

               
Cow position:
               
chr4:5553979-5553796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 81
               

               
Conread position:
               
258-438
               

               
Cow position:
               
chr4:34924879-34924701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
72, 87
               

               
Conread position:
               
258-460
               

               
Cow position:
               
chr4:44956376-44956171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
258-510
               

               
Cow position:
               
chr4:65431956-65432212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
258-547
               

               
Cow position:
               
chr4:54111557-54111840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
84, 146
               

               
Conread position:
               
258-552
               

               
Cow position:
               
chr4:32726036-32726327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
234, 143
               

               
Conread position:
               
258-552
               

               
Cow position:
               
chr4:59277666-59277376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
258-565
               

               
Cow position:
               
chr4:65175329-65175030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 100
               

               
Conread position:
               
258-568
               

               
Cow position:
               
chr4:2602044-2602350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
258-569
               

               
Cow position:
               
chr4:16593897-16594203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
141, 23
               

               
Conread position:
               
258-569
               

               
Cow position:
               
chr4:19408186-19407879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
143, 19
               

               
Conread position:
               
258-570
               

               
Cow position:
               
chr4:30791778-30792088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
258-570
               

               
Cow position:
               
chr4:58881153-58880838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
258-571
               

               
Cow position:
               
chr4:19699916-19700220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 142
               

               
Conread position:
               
258-572
               

               
Cow position:
               
chr4:16762918-16762604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
47, 85
               

               
Conread position:
               
258-593
               

               
Cow position:
               
chr4:203332-202993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
183, 141
               

               
Conread position:
               
258-636
               

               
Cow position:
               
chr4:12127829-12127449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
258-636
               

               
Cow position:
               
chr4:13941273-13941639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
258-640
               

               
Cow position:
               
chr4:25356492-25356121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
270, 50
               

               
Conread position:
               
258-640
               

               
Cow position:
               
chr4:38944451-38944068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 209
               

               
Conread position:
               
258-644
               

               
Cow position:
               
chr4:85509-85893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
141, 36
               

               
Conread position:
               
258-644
               

               
Cow position:
               
chr4:65824219-65824616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
66, 151
               

               
Conread position:
               
260-593
               

               
Cow position:
               
chr4:13344357-13344685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
11, 98
               

               
Conread position:
               
261-399
               

               
Cow position:
               
chr4:20842737-20842874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
261-399
               

               
Cow position:
               
chr4:45574818-45574955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 106
               

               
Conread position:
               
261-417
               

               
Cow position:
               
chr4:43515539-43515695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
115, 125
               

               
Conread position:
               
261-421
               

               
Cow position:
               
chr4:39767162-39767326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
261-432
               

               
Cow position:
               
chr4:26541551-26541724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
73, 122
               

               
Conread position:
               
261-467
               

               
Cow position:
               
chr4:14964594-14964796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
138, 63
               

               
Conread position:
               
261-486
               

               
Cow position:
               
chr4:19463308-19463533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
194, 189
               

               
Conread position:
               
261-544
               

               
Cow position:
               
chr4:13974155-13973874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
176, 28
               

               
Conread position:
               
261-570
               

               
Cow position:
               
chr4:59377726-59378031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 116
               

               
Conread position:
               
261-571
               

               
Cow position:
               
chr4:13222359-13222064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
231, 15
               

               
Conread position:
               
261-573
               

               
Cow position:
               
chr4:48961667-48961361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 109
               

               
Conread position:
               
261-637
               

               
Cow position:
               
chr4:24810626-24810260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
267, 30
               

               
Conread position:
               
261-644
               

               
Cow position:
               
chr4:51768929-51769319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
262-372
               

               
Cow position:
               
chr4:51083544-51083434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 90
               

               
Conread position:
               
262-408
               

               
Cow position:
               
chr4:23911772-23911623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
262-413
               

               
Cow position:
               
chr4:43749994-43749844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
145, 136
               

               
Conread position:
               
262-429
               

               
Cow position:
               
chr4:54851306-54851138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 159
               

               
Conread position:
               
262-445
               

               
Cow position:
               
chr4:21275889-21276069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 99
               

               
Conread position:
               
262-518
               

               
Cow position:
               
chr4:27664823-27665083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 175
               

               
Conread position:
               
262-604
               

               
Cow position:
               
chr4:1026411-1026075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 100
               

               
Conread position:
               
262-636
               

               
Cow position:
               
chr4:22713677-22713295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
62, 138
               

               
Conread position:
               
262-640
               

               
Cow position:
               
chr4:36929131-36929487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
369, 139
               

               
Conread position:
               
263-509
               

               
Cow position:
               
chr4:4843433-4843183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 147
               

               
Conread position:
               
263-588
               

               
Cow position:
               
chr4:56590849-56591184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 213
               

               
Conread position:
               
264-518
               

               
Cow position:
               
chr4:29106719-29106977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 136
               

               
Conread position:
               
264-643
               

               
Cow position:
               
chr4:11218574-11218951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 125
               

               
Conread position:
               
265-520
               

               
Cow position:
               
chr4:11331909-11332169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
265-605
               

               
Cow position:
               
chr4:45077252-45076918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
164, 36
               

               
Conread position:
               
266-399
               

               
Cow position:
               
chr4:25359425-25359561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
266-420
               

               
Cow position:
               
chr4:27687740-27687896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
5, 144
               

               
Conread position:
               
266-569
               

               
Cow position:
               
chr4:31506214-31505903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
134, 300
               

               
Conread position:
               
266-601
               

               
Cow position:
               
chr4:17186535-17186192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 179
               

               
Conread position:
               
269-593
               

               
Cow position:
               
chr4:34022766-34022437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 309
               

               
Conread position:
               
270-490
               

               
Cow position:
               
chr4:3689530-3689745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
131, 81
               

               
Conread position:
               
274-409
               

               
Cow position:
               
chr4:46720338-46720199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
274-422
               

               
Cow position:
               
chr4:38887311-38887157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
274-571
               

               
Cow position:
               
chr4:54479078-54478797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
218, 82
               

               
Conread position:
               
274-644
               

               
Cow position:
               
chr4:28839451-28839813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
275-610
               

               
Cow position:
               
chr4:48321851-48322203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
277-569
               

               
Cow position:
               
chr4:41371111-41370820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
121, 39
               

               
Conread position:
               
279-446
               

               
Cow position:
               
chr4:36724869-36725038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
279-518
               

               
Cow position:
               
chr4:2885713-2885470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
50, 33
               

               
Conread position:
               
279-522
               

               
Cow position:
               
chr4:27632284-27632517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
212, 17
               

               
Conread position:
               
279-570
               

               
Cow position:
               
chr4:20147016-20147305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
280-605
               

               
Cow position:
               
chr4:16881531-16881209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
177, 121
               

               
Conread position:
               
281-571
               

               
Cow position:
               
chr4:10378941-10379234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 271
               

               
Conread position:
               
281-648
               

               
Cow position:
               
chr4:17774521-17774150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 317
               

               
Conread position:
               
283-519
               

               
Cow position:
               
chr4:45711204-45711434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
196, 97
               

               
Conread position:
               
283-646
               

               
Cow position:
               
chr4:19501249-19500884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
209, 60
               

               
Conread position:
               
288-641
               

               
Cow position:
               
chr4:36290468-36290817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 114
               

               
Conread position:
               
295-626
               

               
Cow position:
               
chr4:44449659-44449340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
7, 12
               

               
Conread position:
               
296-593
               

               
Cow position:
               
chr4:19118854-19119168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
298-470
               

               
Cow position:
               
chr4:47047743-47047916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
301-607
               

               
Cow position:
               
chr4:48409413-48409122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
127, 42
               

               
Conread position:
               
303-606
               

               
Cow position:
               
chr4:20184568-20184846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
304-571
               

               
Cow position:
               
chr4:48396938-48396673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
119, 88
               

               
Conread position:
               
305-621
               

               
Cow position:
               
chr4:37313027-37313349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
186, 33
               

               
Conread position:
               
312-568
               

               
Cow position:
               
chr4:54927576-54927322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
90, 48
               

               
Conread position:
               
312-607
               

               
Cow position:
               
chr4:25537409-25537713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
91, 207
               

               
Conread position:
               
312-638
               

               
Cow position:
               
chr4:52779716-52780037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
179, 89
               

               
Conread position:
               
314-594
               

               
Cow position:
               
chr4:68889691-68889421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
87, 46
               

               
Conread position:
               
317-633
               

               
Cow position:
               
chr4:52832149-52831822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
318-578
               

               
Cow position:
               
chr4:48173008-48173270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 74
               

               
Conread position:
               
320-607
               

               
Cow position:
               
chr4:1419094-1419387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
90, 144
               

               
Conread position:
               
322-636
               

               
Cow position:
               
chr4:34700164-34699849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 154
               

               
Conread position:
               
322-642
               

               
Cow position:
               
chr4:19578277-19578593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
170, 33
               

               
Conread position:
               
324-519
               

               
Cow position:
               
chr4:13026176-13026375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 130
               

               
Conread position:
               
332-629
               

               
Cow position:
               
chr4:38157207-38156910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
74, 220
               

               
Conread position:
               
333-605
               

               
Cow position:
               
chr4:213904-214174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
334-571
               

               
Cow position:
               
chr4:17084455-17084212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
351-640
               

               
Cow position:
               
chr4:46566572-46566277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 260
               

               
Conread position:
               
353-566
               

               
Cow position:
               
chr4:34503197-34503412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
118, 204
               

               
Conread position:
               
361-545
               

               
Cow position:
               
chr4:49826166-49826348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 31
               

               
Conread position:
               
362-552
               

               
Cow position:
               
chr4:66136691-66136505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
131, 55
               

               
Conread position:
               
368-522
               

               
Cow position:
               
chr4:19493472-19493629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
369-607
               

               
Cow position:
               
chr4:59002213-59001975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
123, 30
               

               
Conread position:
               
369-637
               

               
Cow position:
               
chr4:34509761-34510035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
370-626
               

               
Cow position:
               
chr4:60719021-60719287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
374-568
               

               
Cow position:
               
chr4:10851525-10851327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
378-543
               

               
Cow position:
               
chr4:61478531-61478700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
378-570
               

               
Cow position:
               
chr4:19323902-19324096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
26, 173
               

               
Conread position:
               
378-607
               

               
Cow position:
               
chr4:48422805-48423031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
23, 161
               

               
Conread position:
               
381-571
               

               
Cow position:
               
chr4:54541708-54541516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 171
               

               
Conread position:
               
383-616
               

               
Cow position:
               
chr4:17851318-17851086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
383-648
               

               
Cow position:
               
chr4:28701289-28701554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
389-571
               

               
Cow position:
               
chr4:65131514-65131329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
394-569
               

               
Cow position:
               
chr4:60506221-60506394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 83
               

               
Conread position:
               
394-606
               

               
Cow position:
               
chr4:65173047-65173264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
401-605
               

               
Cow position:
               
chr4:10558488-10558698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
414-607
               

               
Cow position:
               
chr4:5727809-5727994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 112
               

               
Conread position:
               
415-616
               

               
Cow position:
               
chr4:34653903-34653701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 121
               

               
Conread position:
               
423-627
               

               
Cow position:
               
chr4:26901301-26901507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
72, 127
               
Show alignments to all cow chromosomes.