Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8009J20.3 |
| Conread position: | 10-190 |
| Cow position: | chr10:64499856-64500038 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 10-234 |
| Cow position: | chr10:38565803-38565582 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 211, 106 |
| Conread position: | 13-211 |
| Cow position: | chr10:33406814-33407003 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 159, 99 |
| Conread position: | 13-212 |
| Cow position: | chr10:48650645-48650452 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 13-235 |
| Cow position: | chr10:35827790-35827567 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 117, 80 |
| Conread position: | 13-235 |
| Cow position: | chr10:45993979-45993751 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 109, 147 |
| Conread position: | 13-235 |
| Cow position: | chr10:46388542-46388765 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 116, 105 |
| Conread position: | 13-235 |
| Cow position: | chr10:50988237-50988015 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 121, 105 |
| Conread position: | 13-238 |
| Cow position: | chr10:52775497-52775727 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 117, 106 |
| Conread position: | 13-240 |
| Cow position: | chr10:5819364-5819585 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 209, 99 |
| Conread position: | 13-277 |
| Cow position: | chr10:67287414-67287135 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 119, 170 |
| Conread position: | 13-286 |
| Cow position: | chr10:33848043-33847763 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 147, 120 |
| Conread position: | 14-230 |
| Cow position: | chr10:17001988-17001776 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 119, 45 |
| Conread position: | 16-235 |
| Cow position: | chr10:27306412-27306627 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 204, 92 |
| Conread position: | 16-235 |
| Cow position: | chr10:50544162-50544369 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 205, 43 |
| Conread position: | 16-240 |
| Cow position: | chr10:23322329-23322116 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 208, 43 |
| Conread position: | 17-240 |
| Cow position: | chr10:11235574-11235352 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 204, 99 |
| Conread position: | 17-281 |
| Cow position: | chr10:69066546-69066291 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 20-235 |
| Cow position: | chr10:48554002-48554216 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 196, 108 |
| Conread position: | 31-282 |
| Cow position: | chr10:41909733-41909999 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 105, 159 |
| Conread position: | 38-279 |
| Cow position: | chr10:8523788-8523550 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 28, 8 |
| Conread position: | 39-240 |
| Cow position: | chr10:30444567-30444373 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 39-277 |
| Cow position: | chr10:17690872-17690649 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 183, 23 |
| Conread position: | 40-230 |
| Cow position: | chr10:57771629-57771816 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 6 |
| Conread position: | 54-275 |
| Cow position: | chr10:37220838-37220619 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 10 |
| Conread position: | 60-277 |
| Cow position: | chr10:6637229-6637018 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 166, 66 |
| Conread position: | 63-240 |
| Cow position: | chr10:32318325-32318149 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 158, 55 |
| Conread position: | 66-235 |
| Cow position: | chr10:11633490-11633658 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 73-213 |
| Cow position: | chr10:43331360-43331224 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 57, 39 |
| Conread position: | 76-277 |
| Cow position: | chr10:15336027-15335822 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 145, 20 |
| Conread position: | 107-277 |
| Cow position: | chr10:18776601-18776772 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 11 |
Show alignments to all cow chromosomes.