Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8009J20.3 |
| Conread position: | 8-188 |
| Cow position: | chr11:26613376-26613539 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 11-234 |
| Cow position: | chr11:20956912-20956687 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 13-187 |
| Cow position: | chr11:71788394-71788561 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 13-234 |
| Cow position: | chr11:73467965-73467741 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 113, 24 |
| Conread position: | 13-235 |
| Cow position: | chr11:5112316-5112529 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 13-235 |
| Cow position: | chr11:62164826-62164605 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 209, 113 |
| Conread position: | 13-235 |
| Cow position: | chr11:62816678-62816895 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 117, 46 |
| Conread position: | 13-235 |
| Cow position: | chr11:67539243-67539471 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 119, 84 |
| Conread position: | 13-235 |
| Cow position: | chr11:68661049-68661276 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 85 |
| Conread position: | 13-265 |
| Cow position: | chr11:21815652-21815418 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 208, 71 |
| Conread position: | 13-271 |
| Cow position: | chr11:26144755-26144503 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 80, 133 |
| Conread position: | 13-274 |
| Cow position: | chr11:32690578-32690855 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 117, 180 |
| Conread position: | 13-274 |
| Cow position: | chr11:73367559-73367303 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 56, 107 |
| Conread position: | 13-275 |
| Cow position: | chr11:35936175-35936422 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 208, 59 |
| Conread position: | 13-277 |
| Cow position: | chr11:53808518-53808784 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 98, 176 |
| Conread position: | 13-277 |
| Cow position: | chr11:63254332-63254611 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 13-277 |
| Cow position: | chr11:68306382-68306103 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 176, 115 |
| Conread position: | 13-277 |
| Cow position: | chr11:77681394-77681121 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 172, 48 |
| Conread position: | 16-235 |
| Cow position: | chr11:16746593-16746375 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 205, 102 |
| Conread position: | 17-182 |
| Cow position: | chr11:32599031-32599194 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 17-235 |
| Cow position: | chr11:23355664-23355440 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 175, 46 |
| Conread position: | 38-277 |
| Cow position: | chr11:73639190-73638951 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 186, 91 |
| Conread position: | 63-235 |
| Cow position: | chr11:17350349-17350174 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 130 |
| Conread position: | 63-235 |
| Cow position: | chr11:57824223-57824044 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 54, 131 |
| Conread position: | 70-235 |
| Cow position: | chr11:81266530-81266696 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 151, 118 |
| Conread position: | 71-235 |
| Cow position: | chr11:63479247-63479415 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 122 |
| Conread position: | 73-235 |
| Cow position: | chr11:58340898-58340730 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 51, 120 |
Show alignments to all cow chromosomes.