Cow genome map

Conread name: Ss1.1-Pig3-SRG8009J20.3

Conread position: 10-187
Cow position: chr17:25354646-25354472 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 96, 77

Conread position: 10-290
Cow position: chr17:27079500-27079205 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 181, 0

Conread position: 13-170
Cow position: chr17:11141262-11141415 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 13-225
Cow position: chr17:1263523-1263317 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 82, 0

Conread position: 13-234
Cow position: chr17:1564405-1564622 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 24

Conread position: 13-235
Cow position: chr17:5797497-5797721 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 119, 105

Conread position: 13-235
Cow position: chr17:5801435-5801659 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 119, 105

Conread position: 13-235
Cow position: chr17:8030586-8030362 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 119

Conread position: 13-235
Cow position: chr17:12668389-12668168 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 117, 58

Conread position: 13-235
Cow position: chr17:14675003-14674787 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 117, 68

Conread position: 13-235
Cow position: chr17:25127317-25127535 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 205, 108

Conread position: 13-235
Cow position: chr17:26750101-26749889 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 208, 42

Conread position: 13-235
Cow position: chr17:27010022-27010243 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 193, 109

Conread position: 13-240
Cow position: chr17:7975056-7975277 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 87, 112

Conread position: 16-234
Cow position: chr17:3387489-3387696 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 205, 91

Conread position: 16-234
Cow position: chr17:20092472-20092678 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 101

Conread position: 16-303
Cow position: chr17:3208040-3208327 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 31, 41

Conread position: 17-235
Cow position: chr17:35531992-35531789 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 204, 42

Conread position: 18-212
Cow position: chr17:40812412-40812227 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 18-276
Cow position: chr17:26635561-26635814 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 116, 37

Conread position: 19-277
Cow position: chr17:7435296-7435028 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 21, 70

Conread position: 20-238
Cow position: chr17:21100657-21100443 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 34, 79

Conread position: 20-240
Cow position: chr17:24896278-24896487 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 200, 32

Conread position: 27-272
Cow position: chr17:6020351-6020107 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 194, 89

Conread position: 32-235
Cow position: chr17:7242044-7242249 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 100, 158

Conread position: 38-235
Cow position: chr17:9141313-9141515 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 20, 129

Conread position: 38-235
Cow position: chr17:14760582-14760774 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 26

Conread position: 38-277
Cow position: chr17:27906642-27906396 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 82

Conread position: 45-236
Cow position: chr17:25663054-25663248 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 142

Conread position: 46-277
Cow position: chr17:9169716-9169482 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 108, 83

Conread position: 60-220
Cow position: chr17:22421131-22421290 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 35

Conread position: 63-234
Cow position: chr17:21339044-21339211 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 55

Conread position: 63-234
Cow position: chr17:24986515-24986336 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 135

Conread position: 63-240
Cow position: chr17:34068915-34069097 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 36

Conread position: 64-240
Cow position: chr17:424614-424439 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 157, 29

Conread position: 70-235
Cow position: chr17:5706752-5706912 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 76-235
Cow position: chr17:7628406-7628562 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 145, 18

Conread position: 81-240
Cow position: chr17:25668805-25668645 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 49

Conread position: 82-235
Cow position: chr17:3913981-3914135 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 95

Conread position: 103-283
Cow position: chr17:41262601-41262787 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 87

Show alignments to all cow chromosomes.