Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8009J20.3 |
| Conread position: | 11-187 |
| Cow position: | chr18:47844446-47844621 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 11-235 |
| Cow position: | chr18:54450696-54450911 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 210, 105 |
| Conread position: | 13-175 |
| Cow position: | chr18:56417938-56418097 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 13-234 |
| Cow position: | chr18:34612116-34612340 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 113, 180 |
| Conread position: | 13-235 |
| Cow position: | chr18:21701290-21701515 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 121, 180 |
| Conread position: | 13-235 |
| Cow position: | chr18:37487351-37487126 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 119, 180 |
| Conread position: | 13-236 |
| Cow position: | chr18:18701867-18702094 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 99, 179 |
| Conread position: | 13-277 |
| Cow position: | chr18:39943733-39943461 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 176, 105 |
| Conread position: | 13-313 |
| Cow position: | chr18:24593692-24594013 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 97, 179 |
| Conread position: | 16-154 |
| Cow position: | chr18:44393920-44393786 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 16-235 |
| Cow position: | chr18:35856857-35857082 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 93 |
| Conread position: | 16-235 |
| Cow position: | chr18:42266370-42266592 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 121, 174 |
| Conread position: | 16-235 |
| Cow position: | chr18:51217936-51217721 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 204, 97 |
| Conread position: | 17-235 |
| Cow position: | chr18:35874451-35874658 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 204, 82 |
| Conread position: | 31-235 |
| Cow position: | chr18:40241273-40241480 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 53-235 |
| Cow position: | chr18:35719695-35719509 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 64, 138 |
| Conread position: | 88-274 |
| Cow position: | chr18:30132410-30132225 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 132, 57 |
| Conread position: | 101-235 |
| Cow position: | chr18:54079042-54078909 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 119, 25 |
| Conread position: | 129-277 |
| Cow position: | chr18:23377060-23377209 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 66 |
Show alignments to all cow chromosomes.