Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8009J20.3 |
| Conread position: | 11-235 |
| Cow position: | chr20:33851394-33851621 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 119, 179 |
| Conread position: | 13-170 |
| Cow position: | chr20:7454011-7453863 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 13-170 |
| Cow position: | chr20:38035209-38035365 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 124, 24 |
| Conread position: | 13-187 |
| Cow position: | chr20:39323251-39323425 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 117, 134 |
| Conread position: | 13-210 |
| Cow position: | chr20:21250677-21250872 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 13-212 |
| Cow position: | chr20:664924-665112 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 13-229 |
| Cow position: | chr20:2677973-2677770 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 208, 24 |
| Conread position: | 13-230 |
| Cow position: | chr20:13443722-13443927 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 207, 99 |
| Conread position: | 13-230 |
| Cow position: | chr20:29067567-29067785 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 121, 65 |
| Conread position: | 13-230 |
| Cow position: | chr20:38728834-38729053 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 111, 91 |
| Conread position: | 13-230 |
| Cow position: | chr20:41138321-41138099 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 104, 15 |
| Conread position: | 13-235 |
| Cow position: | chr20:33102556-33102334 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 208, 117 |
| Conread position: | 13-240 |
| Cow position: | chr20:35697746-35697520 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 52, 106 |
| Conread position: | 13-240 |
| Cow position: | chr20:35751996-35751770 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 52, 106 |
| Conread position: | 13-293 |
| Cow position: | chr20:41672488-41672215 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 16-269 |
| Cow position: | chr20:39679414-39679160 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 114, 102 |
| Conread position: | 17-238 |
| Cow position: | chr20:20406868-20407088 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 204, 17 |
| Conread position: | 17-277 |
| Cow position: | chr20:3937246-3937505 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 32-235 |
| Cow position: | chr20:38733408-38733618 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 106, 162 |
| Conread position: | 38-296 |
| Cow position: | chr20:40124178-40124436 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 97, 53 |
| Conread position: | 49-277 |
| Cow position: | chr20:8440914-8441149 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 15, 93 |
| Conread position: | 60-240 |
| Cow position: | chr20:19611713-19611539 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 161, 50 |
| Conread position: | 60-240 |
| Cow position: | chr20:39015262-39015446 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 134 |
| Conread position: | 63-277 |
| Cow position: | chr20:22389623-22389405 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 152, 55 |
| Conread position: | 65-213 |
| Cow position: | chr20:13953395-13953251 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 66-277 |
| Cow position: | chr20:20223526-20223745 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 35 |
| Conread position: | 71-234 |
| Cow position: | chr20:37611557-37611385 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 72-235 |
| Cow position: | chr20:30501141-30500975 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 121 |
| Conread position: | 88-235 |
| Cow position: | chr20:30659959-30659812 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 93-235 |
| Cow position: | chr20:1329588-1329733 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 97 |
Show alignments to all cow chromosomes.