Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8009J20.3 |
| Conread position: | 10-277 |
| Cow position: | chr23:18580653-18580912 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 70, 109 |
| Conread position: | 13-179 |
| Cow position: | chr23:4921417-4921578 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 46, 52 |
| Conread position: | 13-213 |
| Cow position: | chr23:4331489-4331298 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 53, 75 |
| Conread position: | 13-229 |
| Cow position: | chr23:4625068-4624853 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 119, 105 |
| Conread position: | 13-235 |
| Cow position: | chr23:30987806-30987590 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 203, 33 |
| Conread position: | 13-236 |
| Cow position: | chr23:22251182-22251395 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 13-238 |
| Cow position: | chr23:27154937-27155159 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 208, 95 |
| Conread position: | 13-257 |
| Cow position: | chr23:3554597-3554355 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 34, 24 |
| Conread position: | 13-277 |
| Cow position: | chr23:11751853-11752134 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 119, 181 |
| Conread position: | 13-279 |
| Cow position: | chr23:8247004-8247263 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 74 |
| Conread position: | 16-181 |
| Cow position: | chr23:31280673-31280832 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 17-236 |
| Cow position: | chr23:5378676-5378471 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 103 |
| Conread position: | 17-240 |
| Cow position: | chr23:10552613-10552376 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 66 |
| Conread position: | 17-258 |
| Cow position: | chr23:5172437-5172672 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 204, 99 |
| Conread position: | 20-235 |
| Cow position: | chr23:5243350-5243136 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 73, 102 |
| Conread position: | 32-246 |
| Cow position: | chr23:21432846-21432621 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 165 |
| Conread position: | 38-277 |
| Cow position: | chr23:3535882-3536124 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 158 |
| Conread position: | 39-230 |
| Cow position: | chr23:5924426-5924620 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 154 |
| Conread position: | 39-235 |
| Cow position: | chr23:37266235-37266041 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 185, 60 |
| Conread position: | 44-240 |
| Cow position: | chr23:18454712-18454908 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 68, 83 |
| Conread position: | 51-239 |
| Cow position: | chr23:4346915-4347101 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 170, 72 |
| Conread position: | 53-235 |
| Cow position: | chr23:33414859-33414685 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 168, 8 |
| Conread position: | 66-240 |
| Cow position: | chr23:24544865-24544696 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 155, 35 |
| Conread position: | 82-277 |
| Cow position: | chr23:6231190-6231003 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 134, 36 |
| Conread position: | 101-277 |
| Cow position: | chr23:37810100-37810286 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 89 |
Show alignments to all cow chromosomes.