Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8009J20.3 |
| Conread position: | 10-235 |
| Cow position: | chr24:38003506-38003284 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 120, 106 |
| Conread position: | 12-234 |
| Cow position: | chr24:33375316-33375542 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 93, 179 |
| Conread position: | 13-182 |
| Cow position: | chr24:10567069-10567234 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 13-185 |
| Cow position: | chr24:10878859-10879031 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 126, 50 |
| Conread position: | 13-187 |
| Cow position: | chr24:22052405-22052237 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 13-220 |
| Cow position: | chr24:18269606-18269406 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 13, 18 |
| Conread position: | 13-230 |
| Cow position: | chr24:7756220-7756438 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 94, 85 |
| Conread position: | 13-235 |
| Cow position: | chr24:5816472-5816247 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 117, 180 |
| Conread position: | 13-271 |
| Cow position: | chr24:30954886-30954619 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 180, 103 |
| Conread position: | 13-277 |
| Cow position: | chr24:18419813-18419545 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 121, 70 |
| Conread position: | 13-277 |
| Cow position: | chr24:18760767-18760495 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 51, 107 |
| Conread position: | 19-235 |
| Cow position: | chr24:6941963-6942177 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 115, 23 |
| Conread position: | 33-235 |
| Cow position: | chr24:18852258-18852454 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 38-235 |
| Cow position: | chr24:8789486-8789680 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 182, 83 |
| Conread position: | 45-235 |
| Cow position: | chr24:20948296-20948104 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 86, 73 |
| Conread position: | 63-234 |
| Cow position: | chr24:25111602-25111429 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 16, 128 |
| Conread position: | 63-277 |
| Cow position: | chr24:21527357-21527578 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 158, 127 |
| Conread position: | 63-293 |
| Cow position: | chr24:2057313-2057077 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 150, 63 |
| Conread position: | 64-277 |
| Cow position: | chr24:16195609-16195396 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 129, 59 |
| Conread position: | 65-212 |
| Cow position: | chr24:21076197-21076342 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 53 |
| Conread position: | 70-235 |
| Cow position: | chr24:14234672-14234842 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 114, 52 |
| Conread position: | 71-274 |
| Cow position: | chr24:17259059-17258851 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 186 |
Show alignments to all cow chromosomes.