Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8009J20.3 |
| Conread position: | 10-235 |
| Cow position: | chr25:7854984-7854761 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 211, 91 |
| Conread position: | 10-235 |
| Cow position: | chr25:8914127-8913911 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 206, 68 |
| Conread position: | 13-181 |
| Cow position: | chr25:7208331-7208166 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 13-235 |
| Cow position: | chr25:22301782-22301565 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 44 |
| Conread position: | 13-253 |
| Cow position: | chr25:8462480-8462721 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 86, 106 |
| Conread position: | 14-277 |
| Cow position: | chr25:3566672-3566412 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 207, 94 |
| Conread position: | 16-235 |
| Cow position: | chr25:13395016-13395228 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 106, 52 |
| Conread position: | 17-240 |
| Cow position: | chr25:20489944-20490167 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 95, 36 |
| Conread position: | 31-235 |
| Cow position: | chr25:12927569-12927367 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 32-235 |
| Cow position: | chr25:12620771-12620975 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 98, 51 |
| Conread position: | 39-235 |
| Cow position: | chr25:27803626-27803823 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 109, 153 |
| Conread position: | 44-235 |
| Cow position: | chr25:20215175-20215367 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 86, 144 |
| Conread position: | 46-240 |
| Cow position: | chr25:5528797-5528982 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 43, 63 |
| Conread position: | 60-235 |
| Cow position: | chr25:13665156-13664989 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 63-235 |
| Cow position: | chr25:13360351-13360529 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 63-294 |
| Cow position: | chr25:9251819-9251586 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 75, 127 |
| Conread position: | 65-277 |
| Cow position: | chr25:18673565-18673356 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 66-277 |
| Cow position: | chr25:29812477-29812272 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 155, 50 |
| Conread position: | 71-235 |
| Cow position: | chr25:14732961-14733124 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 71-240 |
| Cow position: | chr25:27887166-27886999 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 150, 47 |
| Conread position: | 71-273 |
| Cow position: | chr25:13869304-13869099 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 122 |
| Conread position: | 73-235 |
| Cow position: | chr25:13073604-13073444 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 148, 50 |
| Conread position: | 82-235 |
| Cow position: | chr25:14489037-14488883 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 138, 113 |
| Conread position: | 88-277 |
| Cow position: | chr25:26310457-26310650 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 15, 11 |
Show alignments to all cow chromosomes.