Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8009J20.3 |
| Conread position: | 1-282 |
| Cow position: | chr27:27466284-27466000 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 16, 118 |
| Conread position: | 10-187 |
| Cow position: | chr27:602070-601895 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 13-212 |
| Cow position: | chr27:23006678-23006482 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 13-235 |
| Cow position: | chr27:17065273-17065495 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 116, 8 |
| Conread position: | 13-235 |
| Cow position: | chr27:21997357-21997147 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 98, 54 |
| Conread position: | 13-235 |
| Cow position: | chr27:22793244-22793455 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 208, 70 |
| Conread position: | 13-235 |
| Cow position: | chr27:23043488-23043276 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 203, 24 |
| Conread position: | 13-235 |
| Cow position: | chr27:26395670-26395451 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 208, 14 |
| Conread position: | 13-288 |
| Cow position: | chr27:16425624-16425368 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 14-280 |
| Cow position: | chr27:24711244-24710959 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 103, 78 |
| Conread position: | 16-240 |
| Cow position: | chr27:30037590-30037809 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 200, 96 |
| Conread position: | 17-286 |
| Cow position: | chr27:19470427-19470702 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 178 |
| Conread position: | 21-273 |
| Cow position: | chr27:27711827-27712083 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 196, 100 |
| Conread position: | 39-275 |
| Cow position: | chr27:22705438-22705206 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 183, 83 |
| Conread position: | 41-235 |
| Cow position: | chr27:18489789-18489976 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 49-234 |
| Cow position: | chr27:22613157-22613342 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 172, 80 |
| Conread position: | 51-240 |
| Cow position: | chr27:26986393-26986207 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 79, 12 |
| Conread position: | 63-180 |
| Cow position: | chr27:29969568-29969450 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 63-277 |
| Cow position: | chr27:28040806-28041021 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 67, 25 |
| Conread position: | 63-282 |
| Cow position: | chr27:26162688-26162469 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 158, 48 |
| Conread position: | 66-235 |
| Cow position: | chr27:20610649-20610477 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 64 |
| Conread position: | 71-234 |
| Cow position: | chr27:29936599-29936437 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 150, 47 |
Show alignments to all cow chromosomes.