Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8009J20.3 |
| Conread position: | 10-234 |
| Cow position: | chr29:11283690-11283916 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 108, 74 |
| Conread position: | 10-279 |
| Cow position: | chr29:21647567-21647843 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 211, 113 |
| Conread position: | 13-205 |
| Cow position: | chr29:26530943-26530748 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 179 |
| Conread position: | 13-235 |
| Cow position: | chr29:3724869-3724659 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 207, 42 |
| Conread position: | 13-235 |
| Cow position: | chr29:42200178-42200407 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 33, 92 |
| Conread position: | 13-277 |
| Cow position: | chr29:31966309-31966048 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 105 |
| Conread position: | 16-233 |
| Cow position: | chr29:31797020-31796808 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 79, 103 |
| Conread position: | 17-234 |
| Cow position: | chr29:21913852-21914072 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 17-234 |
| Cow position: | chr29:23563220-23563004 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 204, 109 |
| Conread position: | 18-235 |
| Cow position: | chr29:4134046-4133835 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 198, 100 |
| Conread position: | 19-235 |
| Cow position: | chr29:1597194-1596973 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 98, 140 |
| Conread position: | 38-275 |
| Cow position: | chr29:8833241-8833498 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 47 |
| Conread position: | 49-241 |
| Cow position: | chr29:23080992-23080806 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 16 |
| Conread position: | 60-277 |
| Cow position: | chr29:17126334-17126107 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 161, 62 |
| Conread position: | 63-223 |
| Cow position: | chr29:24175692-24175531 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 71, 52 |
| Conread position: | 63-268 |
| Cow position: | chr29:23814325-23814536 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 95 |
| Conread position: | 66-230 |
| Cow position: | chr29:24590079-24590238 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 33 |
| Conread position: | 71-215 |
| Cow position: | chr29:23949969-23949825 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 63, 48 |
| Conread position: | 78-235 |
| Cow position: | chr29:29460521-29460366 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 116 |
| Conread position: | 101-235 |
| Cow position: | chr29:27949678-27949543 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 120, 87 |
Show alignments to all cow chromosomes.