Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8009J20.3 |
| Conread position: | 11-277 |
| Cow position: | chr9:55172896-55172621 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 27, 115 |
| Conread position: | 13-180 |
| Cow position: | chr9:46530260-46530431 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 13-219 |
| Cow position: | chr9:7375019-7374823 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 121, 36 |
| Conread position: | 13-233 |
| Cow position: | chr9:6310658-6310434 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 123, 36 |
| Conread position: | 13-235 |
| Cow position: | chr9:33088060-33087831 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 117, 181 |
| Conread position: | 13-235 |
| Cow position: | chr9:37972916-37972701 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 208, 99 |
| Conread position: | 13-240 |
| Cow position: | chr9:32427666-32427894 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 101, 159 |
| Conread position: | 13-297 |
| Cow position: | chr9:54299697-54299973 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 208, 20 |
| Conread position: | 16-165 |
| Cow position: | chr9:8508734-8508590 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 16-174 |
| Cow position: | chr9:53961579-53961736 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 16-235 |
| Cow position: | chr9:31370050-31370274 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 150, 62 |
| Conread position: | 19-274 |
| Cow position: | chr9:32031477-32031216 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 98, 195 |
| Conread position: | 19-279 |
| Cow position: | chr9:12896356-12896090 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 94 |
| Conread position: | 31-254 |
| Cow position: | chr9:17053281-17053057 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 190, 157 |
| Conread position: | 37-230 |
| Cow position: | chr9:40243300-40243499 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 97, 74 |
| Conread position: | 62-240 |
| Cow position: | chr9:36047585-36047768 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 63-234 |
| Cow position: | chr9:52761910-52761742 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 157, 107 |
| Conread position: | 63-240 |
| Cow position: | chr9:32362489-32362309 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 54, 128 |
| Conread position: | 63-283 |
| Cow position: | chr9:59807599-59807808 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 158, 22 |
| Conread position: | 64-230 |
| Cow position: | chr9:47174198-47174366 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 54 |
| Conread position: | 66-235 |
| Cow position: | chr9:32017172-32017000 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 68, 127 |
| Conread position: | 68-256 |
| Cow position: | chr9:21688456-21688268 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 54 |
| Conread position: | 71-277 |
| Cow position: | chr9:1593724-1593504 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 150, 27 |
| Conread position: | 89-277 |
| Cow position: | chr9:54664042-54664241 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.