Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8009J20.3 |
| Conread position: | 11-212 |
| Cow position: | chrX:34675355-34675549 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 161, 105 |
| Conread position: | 12-235 |
| Cow position: | chrX:46386754-46386532 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 73, 88 |
| Conread position: | 13-159 |
| Cow position: | chrX:10111806-10111664 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 117, 71 |
| Conread position: | 13-223 |
| Cow position: | chrX:5650729-5650928 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 13-235 |
| Cow position: | chrX:5857222-5856990 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 104, 187 |
| Conread position: | 13-235 |
| Cow position: | chrX:18107042-18107271 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 30, 181 |
| Conread position: | 13-235 |
| Cow position: | chrX:18963708-18963482 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 103, 178 |
| Conread position: | 13-240 |
| Cow position: | chrX:34010639-34010425 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 208, 71 |
| Conread position: | 13-277 |
| Cow position: | chrX:9291852-9292113 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 69 |
| Conread position: | 41-212 |
| Cow position: | chrX:12838360-12838186 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 81, 56 |
| Conread position: | 49-275 |
| Cow position: | chrX:33424571-33424799 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 81, 144 |
| Conread position: | 60-235 |
| Cow position: | chrX:10384548-10384723 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 161, 69 |
| Conread position: | 64-287 |
| Cow position: | chrX:29207839-29208055 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 157, 19 |
| Conread position: | 101-230 |
| Cow position: | chrX:17493718-17493849 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 22 |
| Conread position: | 101-235 |
| Cow position: | chrX:4402997-4403131 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 120, 18 |
| Conread position: | 109-277 |
| Cow position: | chrX:42582930-42582764 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 67 |
Show alignments to all cow chromosomes.