Cow genome map

Conread name: Ss1.1-Pig3-SRG8010C13.3

Conread position: 1-530
Cow position:
Alignm length: 531
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 0

Conread position: 1-806
Cow position:
Alignm length: 818
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 85

Conread position: 2-265
Cow position:
Alignm length: 265
Alignm identity: 173
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 169, 164

Conread position: 2-327
Cow position:
Alignm length: 326
Alignm identity: 215
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 2-412
Cow position:
Alignm length: 414
Alignm identity: 269
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 170, 197

Conread position: 2-457
Cow position:
Alignm length: 457
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 445, 451

Conread position: 2-790
Cow position:
Alignm length: 794
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 165

Conread position: 2-806
Cow position:
Alignm length: 806
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 595, 136

Conread position: 3-445
Cow position:
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 419, 410

Conread position: 3-574
Cow position:
Alignm length: 574
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 59

Conread position: 3-614
Cow position:
Alignm length: 612
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-741
Cow position:
Alignm length: 742
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 236

Conread position: 3-743
Cow position:
Alignm length: 745
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 168

Conread position: 3-797
Cow position:
Alignm length: 797
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 559, 529

Conread position: 3-830
Cow position:
Alignm length: 828
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 810, 0

Conread position: 3-831
Cow position:
Alignm length: 833
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 397

Conread position: 5-277
Cow position:
Alignm length: 274
Alignm identity: 187
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 211, 206

Conread position: 5-474
Cow position:
Alignm length: 473
Alignm identity: 298
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 181, 187

Conread position: 5-622
Cow position:
Alignm length: 618
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-666
Cow position:
Alignm length: 665
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 10

Conread position: 5-711
Cow position:
Alignm length: 711
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 418, 410

Conread position: 5-742
Cow position:
Alignm length: 742
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 49

Conread position: 5-786
Cow position:
Alignm length: 784
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 28

Conread position: 5-832
Cow position:
Alignm length: 831
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 160

Conread position: 5-836
Cow position:
Alignm length: 835
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 163

Conread position: 5-839
Cow position:
Alignm length: 838
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 168

Conread position: 5-878
Cow position:
Alignm length: 883
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 90

Conread position: 6-269
Cow position:
Alignm length: 264
Alignm identity: 169
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 6-786
Cow position:
Alignm length: 784
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 23

Conread position: 6-878
Cow position:
Alignm length: 877
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 403

Conread position: 7-780
Cow position:
Alignm length: 775
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 7-786
Cow position:
Alignm length: 784
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 89

Conread position: 7-786
Cow position:
Alignm length: 784
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 236

Conread position: 7-832
Cow position:
Alignm length: 830
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 254

Conread position: 7-832
Cow position:
Alignm length: 831
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 47

Conread position: 7-836
Cow position:
Alignm length: 834
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 55

Conread position: 7-847
Cow position:
Alignm length: 842
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 368

Conread position: 7-877
Cow position:
Alignm length: 874
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 405

Conread position: 8-773
Cow position:
Alignm length: 767
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 422, 411

Conread position: 8-836
Cow position:
Alignm length: 834
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 83

Conread position: 8-839
Cow position:
Alignm length: 833
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 251

Conread position: 9-529
Cow position:
Alignm length: 524
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 159

Conread position: 9-697
Cow position:
Alignm length: 691
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 405

Conread position: 9-832
Cow position:
Alignm length: 827
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 249

Conread position: 9-832
Cow position:
Alignm length: 827
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 403

Conread position: 9-832
Cow position:
Alignm length: 825
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 805, 790

Conread position: 9-835
Cow position:
Alignm length: 830
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 265

Conread position: 9-836
Cow position:
Alignm length: 830
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 583, 574

Conread position: 9-836
Cow position:
Alignm length: 829
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 805, 781

Conread position: 9-836
Cow position:
Alignm length: 831
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 245

Conread position: 10-324
Cow position:
Alignm length: 320
Alignm identity: 209
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 86

Conread position: 10-324
Cow position:
Alignm length: 317
Alignm identity: 205
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 75, 86

Conread position: 10-453
Cow position:
Alignm length: 450
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 179

Conread position: 10-878
Cow position:
Alignm length: 871
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 156

Conread position: 11-492
Cow position:
Alignm length: 485
Alignm identity: 302
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 387, 393

Conread position: 11-576
Cow position:
Alignm length: 573
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 174

Conread position: 11-715
Cow position:
Alignm length: 712
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 79

Conread position: 11-742
Cow position:
Alignm length: 735
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 403

Conread position: 11-743
Cow position:
Alignm length: 738
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 64

Conread position: 11-743
Cow position:
Alignm length: 738
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 64

Conread position: 11-743
Cow position:
Alignm length: 739
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 174

Conread position: 11-744
Cow position:
Alignm length: 738
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 156

Conread position: 11-787
Cow position:
Alignm length: 782
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 168

Conread position: 11-792
Cow position:
Alignm length: 782
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 11-806
Cow position:
Alignm length: 804
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 45

Conread position: 11-806
Cow position:
Alignm length: 803
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 72

Conread position: 11-826
Cow position:
Alignm length: 822
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 67

Conread position: 11-826
Cow position:
Alignm length: 823
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 292

Conread position: 11-826
Cow position:
Alignm length: 826
Alignm identity: 482
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 45

Conread position: 11-829
Cow position:
Alignm length: 829
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 161

Conread position: 11-832
Cow position:
Alignm length: 830
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 169

Conread position: 11-832
Cow position:
Alignm length: 827
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 169

Conread position: 11-878
Cow position:
Alignm length: 874
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 80

Conread position: 11-886
Cow position:
Alignm length: 883
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 416, 398

Conread position: 13-848
Cow position:
Alignm length: 837
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 635, 607

Conread position: 17-491
Cow position:
Alignm length: 480
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 79

Conread position: 23-369
Cow position:
Alignm length: 351
Alignm identity: 226
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 144, 149

Conread position: 23-576
Cow position:
Alignm length: 558
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 168

Conread position: 23-705
Cow position:
Alignm length: 687
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 391

Conread position: 23-743
Cow position:
Alignm length: 727
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 169

Conread position: 23-786
Cow position:
Alignm length: 768
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 391

Conread position: 23-786
Cow position:
Alignm length: 774
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 154

Conread position: 23-786
Cow position:
Alignm length: 770
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 156

Conread position: 23-829
Cow position:
Alignm length: 812
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 156

Conread position: 23-829
Cow position:
Alignm length: 816
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 162

Conread position: 25-830
Cow position:
Alignm length: 811
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 152

Conread position: 29-619
Cow position:
Alignm length: 593
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 562, 555

Conread position: 29-830
Cow position:
Alignm length: 805
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 384

Conread position: 29-836
Cow position:
Alignm length: 810
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 304

Conread position: 34-781
Cow position:
Alignm length: 752
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 225

Conread position: 52-840
Cow position:
Alignm length: 795
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 56

Conread position: 53-786
Cow position:
Alignm length: 737
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 102

Conread position: 53-885
Cow position:
Alignm length: 840
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 210

Conread position: 55-407
Cow position:
Alignm length: 359
Alignm identity: 229
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 37

Conread position: 56-838
Cow position:
Alignm length: 788
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 110

Conread position: 59-790
Cow position:
Alignm length: 734
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 58

Conread position: 82-704
Cow position:
Alignm length: 628
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 17

Conread position: 85-790
Cow position:
Alignm length: 707
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 16

Conread position: 93-826
Cow position:
Alignm length: 736
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 66

Conread position: 95-832
Cow position:
Alignm length: 746
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 89

Conread position: 104-753
Cow position:
Alignm length: 656
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 196

Conread position: 104-786
Cow position:
Alignm length: 689
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 65

Conread position: 105-374
Cow position:
Alignm length: 274
Alignm identity: 183
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 67, 62

Conread position: 107-659
Cow position:
Alignm length: 555
Alignm identity: 340
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 396, 46

Conread position: 115-878
Cow position:
Alignm length: 768
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 124

Conread position: 120-502
Cow position:
Alignm length: 385
Alignm identity: 237
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 60, 6

Conread position: 135-829
Cow position:
Alignm length: 702
Alignm identity: 398
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 33

Conread position: 178-786
Cow position:
Alignm length: 612
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 146

Conread position: 186-468
Cow position:
Alignm length: 285
Alignm identity: 190
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 107, 27

Conread position: 191-458
Cow position:
Alignm length: 271
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 20

Conread position: 191-743
Cow position:
Alignm length: 559
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 34

Conread position: 191-807
Cow position:
Alignm length: 620
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 67

Conread position: 193-774
Cow position:
Alignm length: 587
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 33

Conread position: 261-875
Cow position:
Alignm length: 616
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 167

Conread position: 262-710
Cow position:
Alignm length: 451
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 323

Conread position: 262-786
Cow position:
Alignm length: 527
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 145

Conread position: 262-868
Cow position:
Alignm length: 610
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 7

Conread position: 263-542
Cow position:
Alignm length: 283
Alignm identity: 189
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 160, 9

Conread position: 263-790
Cow position:
Alignm length: 531
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 151

Conread position: 281-844
Cow position:
Alignm length: 566
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 119

Conread position: 344-876
Cow position:
Alignm length: 536
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 69

Conread position: 349-626
Cow position:
Alignm length: 280
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 259

Conread position: 351-637
Cow position:
Alignm length: 288
Alignm identity: 188
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 73, 28

Conread position: 355-809
Cow position:
Alignm length: 458
Alignm identity: 274
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 54

Conread position: 356-886
Cow position:
Alignm length: 539
Alignm identity: 323
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 41

Conread position: 427-805
Cow position:
Alignm length: 383
Alignm identity: 234
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 148, 168

Conread position: 428-835
Cow position:
Alignm length: 409
Alignm identity: 259
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 66, 79

Conread position: 433-689
Cow position:
Alignm length: 258
Alignm identity: 166
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 443-743
Cow position:
Alignm length: 303
Alignm identity: 191
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 154, 134

Conread position: 449-839
Cow position:
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 304

Conread position: 506-848
Cow position:
Alignm length: 344
Alignm identity: 210
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 166, 157

Show alignments to all cow chromosomes.