Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8010C13.3
        

               Conread position:
               1-658
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 239
               

               Conread position:
               2-797
               

               Cow position:
               
               

               Alignm length:
               798
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 144
               

               Conread position:
               2-826
               

               Cow position:
               
               

               Alignm length:
               828
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 257
               

               Conread position:
               3-461
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 161
               

               Conread position:
               3-549
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 53
               

               Conread position:
               3-742
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               421, 408
               

               Conread position:
               3-773
               

               Cow position:
               
               

               Alignm length:
               774
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 116
               

               Conread position:
               3-783
               

               Cow position:
               
               

               Alignm length:
               782
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 255
               

               Conread position:
               5-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 162
               

               Conread position:
               5-512
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 162
               

               Conread position:
               5-629
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 87
               

               Conread position:
               5-633
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 91
               

               Conread position:
               5-829
               

               Cow position:
               
               

               Alignm length:
               828
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               427, 420
               

               Conread position:
               5-878
               

               Cow position:
               
               

               Alignm length:
               880
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               429, 412
               

               Conread position:
               8-710
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               676, 670
               

               Conread position:
               9-630
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-780
               

               Cow position:
               
               

               Alignm length:
               773
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               408, 401
               

               Conread position:
               10-380
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               240
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               243, 239
               

               Conread position:
               10-545
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-783
               

               Cow position:
               
               

               Alignm length:
               776
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               582, 567
               

               Conread position:
               11-562
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-717
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 231
               

               Conread position:
               11-720
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 163
               

               Conread position:
               11-738
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               417, 421
               

               Conread position:
               11-741
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 71
               

               Conread position:
               11-784
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               413, 401
               

               Conread position:
               11-786
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 156
               

               Conread position:
               11-786
               

               Cow position:
               
               

               Alignm length:
               780
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 83
               

               Conread position:
               11-786
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               321, 337
               

               Conread position:
               11-786
               

               Cow position:
               
               

               Alignm length:
               778
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               634, 628
               

               Conread position:
               11-826
               

               Cow position:
               
               

               Alignm length:
               819
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 248
               

               Conread position:
               11-849
               

               Cow position:
               
               

               Alignm length:
               840
               

               Alignm identity:
               547
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               781, 792
               

               Conread position:
               11-849
               

               Cow position:
               
               

               Alignm length:
               842
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               417, 421
               

               Conread position:
               12-786
               

               Cow position:
               
               

               Alignm length:
               778
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               527, 521
               

               Conread position:
               23-629
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 188
               

               Conread position:
               23-711
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 216
               

               Conread position:
               23-720
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 193
               

               Conread position:
               23-842
               

               Cow position:
               
               

               Alignm length:
               822
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               391, 385
               

               Conread position:
               27-772
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 5
               

               Conread position:
               32-949
               

               Cow position:
               
               

               Alignm length:
               926
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               390, 379
               

               Conread position:
               37-832
               

               Cow position:
               
               

               Alignm length:
               797
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               777, 748
               

               Conread position:
               85-809
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               338, 327
               

               Conread position:
               95-805
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 72
               

               Conread position:
               107-741
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 302
               

               Conread position:
               111-786
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 321
               

               Conread position:
               119-836
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 293
               

               Conread position:
               126-786
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 291
               

               Conread position:
               179-786
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               313, 305
               

               Conread position:
               198-800
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               365
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               15, 463
               

               Conread position:
               249-786
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 10
               

               Conread position:
               260-878
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 32
               

               Conread position:
               346-835
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 138
               
Show alignments to all cow chromosomes.