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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8010C13.3
        

               
Conread position:
               
1-324
               

               
Cow position:
               
chr18:40324240-40323918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
292, 0
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr18:42827460-42828004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
448, 453
               

               
Conread position:
               
1-684
               

               
Cow position:
               
chr18:53560150-53560829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
422, 412
               

               
Conread position:
               
1-708
               

               
Cow position:
               
chr18:41198051-41198758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 414
               

               
Conread position:
               
1-741
               

               
Cow position:
               
chr18:51766107-51765370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
118, 18
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:50848391-50849133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 95
               

               
Conread position:
               
1-786
               

               
Cow position:
               
chr18:42744661-42743876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 95
               

               
Conread position:
               
1-787
               

               
Cow position:
               
chr18:56128429-56129214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
790
               

               
Alignm identity:
               
534
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
422, 409
               

               
Conread position:
               
1-835
               

               
Cow position:
               
chr18:33064546-33063713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
837
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 239
               

               
Conread position:
               
1-848
               

               
Cow position:
               
chr18:42985336-42984490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
557
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 82
               

               
Conread position:
               
1-888
               

               
Cow position:
               
chr18:33064882-33063998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
895
               

               
Alignm identity:
               
590
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 261
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr18:55497397-55497036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
171, 176
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr18:14453231-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr18:43048671-43048222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
395, 351
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:33092797-33092313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
71, 91
               

               
Conread position:
               
2-555
               

               
Cow position:
               
chr18:42792365-42792918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 91
               

               
Conread position:
               
2-565
               

               
Cow position:
               
chr18:49032653-49032090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 81
               

               
Conread position:
               
2-584
               

               
Cow position:
               
chr18:44253498-44252930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
419, 125
               

               
Conread position:
               
2-704
               

               
Cow position:
               
chr18:40306646-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-744
               

               
Cow position:
               
chr18:42791693-42792435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 86
               

               
Conread position:
               
2-783
               

               
Cow position:
               
chr18:40306562-40307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
785
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
2-783
               

               
Cow position:
               
chr18:51368041-51367261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
787
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 232
               

               
Conread position:
               
2-783
               

               
Cow position:
               
chr18:54979701-54980482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 257
               

               
Conread position:
               
2-784
               

               
Cow position:
               
chr18:42792113-42792895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
416, 408
               

               
Conread position:
               
2-785
               

               
Cow position:
               
chr18:52433291-52434074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
785
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 94
               

               
Conread position:
               
2-785
               

               
Cow position:
               
chr18:53559983-53560766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 253
               

               
Conread position:
               
2-786
               

               
Cow position:
               
chr18:42791861-42792645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
2-786
               

               
Cow position:
               
chr18:55018021-55018806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
791
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 81
               

               
Conread position:
               
2-787
               

               
Cow position:
               
chr18:40306310-40307095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
788
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
668, 659
               

               
Conread position:
               
2-787
               

               
Cow position:
               
chr18:53635818-53635034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
790
               

               
Alignm identity:
               
557
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
2-789
               

               
Cow position:
               
chr18:42837879-42837092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
790
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 94
               

               
Conread position:
               
2-805
               

               
Cow position:
               
chr18:42675348-42674545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
807
               

               
Alignm identity:
               
534
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 166
               

               
Conread position:
               
2-826
               

               
Cow position:
               
chr18:33065133-33064310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
826
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 53
               

               
Conread position:
               
2-846
               

               
Cow position:
               
chr18:49033241-49032398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
594
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
812, 786
               

               
Conread position:
               
2-863
               

               
Cow position:
               
chr18:52427774-52428634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
544
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 333
               

               
Conread position:
               
2-863
               

               
Cow position:
               
chr18:52433123-52433983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
430, 413
               

               
Conread position:
               
2-878
               

               
Cow position:
               
chr18:42791441-42792317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
879
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
2-895
               

               
Cow position:
               
chr18:52447249-52448142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
898
               

               
Alignm identity:
               
568
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 110
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr18:51400842-51401154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 86
               

               
Conread position:
               
3-469
               

               
Cow position:
               
chr18:33092880-33092411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
169, 177
               

               
Conread position:
               
3-579
               

               
Cow position:
               
chr18:40086206-40085637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
47, 51
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr18:56391457-56390833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 401
               

               
Conread position:
               
3-711
               

               
Cow position:
               
chr18:56316359-56317067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
401, 397
               

               
Conread position:
               
3-741
               

               
Cow position:
               
chr18:51752358-51751623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
3-742
               

               
Cow position:
               
chr18:53635902-53635163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 93
               

               
Conread position:
               
3-747
               

               
Cow position:
               
chr18:50848729-50849473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 84
               

               
Conread position:
               
3-748
               

               
Cow position:
               
chr18:50246051-50246796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 165
               

               
Conread position:
               
3-772
               

               
Cow position:
               
chr18:56316275-56317044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
773
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 218
               

               
Conread position:
               
3-784
               

               
Cow position:
               
chr18:49032820-49032039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
425, 412
               

               
Conread position:
               
3-790
               

               
Cow position:
               
chr18:56315855-56316642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
792
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 61
               

               
Conread position:
               
3-804
               

               
Cow position:
               
chr18:50099201-50100002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
806
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 85
               

               
Conread position:
               
3-805
               

               
Cow position:
               
chr18:49032904-49032102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
804
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
789, 781
               

               
Conread position:
               
3-851
               

               
Cow position:
               
chr18:56329961-56329115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
599
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
750, 742
               

               
Conread position:
               
3-876
               

               
Cow position:
               
chr18:49022286-49023157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
879
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 292
               

               
Conread position:
               
3-1206
               

               
Cow position:
               
chr18:56329625-56328417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1213
               

               
Alignm identity:
               
1043
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
797, 885
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr18:50271941-50272174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
5-255
               

               
Cow position:
               
chr18:42959660-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr18:42674673-42674400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
244, 228
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:43119759-43119464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-301
               

               
Cow position:
               
chr18:55066630-55066334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
172, 152
               

               
Conread position:
               
5-333
               

               
Cow position:
               
chr18:50084098-50084428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
188, 221
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr18:49022958-49023317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
45, 49
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr18:56316697-56317068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr18:53509634-53510023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
175, 162
               

               
Conread position:
               
5-407
               

               
Cow position:
               
chr18:43093190-43092789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 0
               

               
Conread position:
               
5-411
               

               
Cow position:
               
chr18:43022423-43022017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-455
               

               
Cow position:
               
chr18:44184406-44183956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
80, 91
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr18:53635312-53634859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 277
               

               
Conread position:
               
5-489
               

               
Cow position:
               
chr18:51812404-51811920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-492
               

               
Cow position:
               
chr18:50048491-50048018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 76
               

               
Conread position:
               
5-545
               

               
Cow position:
               
chr18:1418062-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 99
               

               
Conread position:
               
5-576
               

               
Cow position:
               
chr18:42744405-42743834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-576
               

               
Cow position:
               
chr18:43120095-43119524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 91
               

               
Conread position:
               
5-625
               

               
Cow position:
               
chr18:40075083-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 192
               

               
Conread position:
               
5-627
               

               
Cow position:
               
chr18:52012131-52011506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
418, 408
               

               
Conread position:
               
5-634
               

               
Cow position:
               
chr18:42792284-42792913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 162
               

               
Conread position:
               
5-643
               

               
Cow position:
               
chr18:56247669-56247042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 50
               

               
Conread position:
               
5-657
               

               
Cow position:
               
chr18:49022622-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
5-659
               

               
Cow position:
               
chr18:56493904-56494556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 89
               

               
Conread position:
               
5-660
               

               
Cow position:
               
chr18:43167852-43168507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 170
               

               
Conread position:
               
5-662
               

               
Cow position:
               
chr18:40324572-40323916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 237
               

               
Conread position:
               
5-720
               

               
Cow position:
               
chr18:43175212-43174497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 415
               

               
Conread position:
               
5-741
               

               
Cow position:
               
chr18:41949036-41948302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
716, 0
               

               
Conread position:
               
5-741
               

               
Cow position:
               
chr18:53586687-53585952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 256
               

               
Conread position:
               
5-775
               

               
Cow position:
               
chr18:56316193-56316963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
773
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 82
               

               
Conread position:
               
5-785
               

               
Cow position:
               
chr18:33064374-33063594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 320
               

               
Conread position:
               
5-786
               

               
Cow position:
               
chr18:44398463-44397682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
5-790
               

               
Cow position:
               
chr18:41949120-41948335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
787
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
585, 575
               

               
Conread position:
               
5-790
               

               
Cow position:
               
chr18:49033322-49032537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
787
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 254
               

               
Conread position:
               
5-826
               

               
Cow position:
               
chr18:50098951-50099771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
833
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
5-829
               

               
Cow position:
               
chr18:40086709-40085893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 32
               

               
Conread position:
               
5-830
               

               
Cow position:
               
chr18:50059563-50058739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
831
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 245
               

               
Conread position:
               
5-848
               

               
Cow position:
               
chr18:41949288-41948446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
584, 573
               

               
Conread position:
               
5-851
               

               
Cow position:
               
chr18:43093691-43092849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
5-876
               

               
Cow position:
               
chr18:43175464-43174593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
415, 407
               

               
Conread position:
               
5-876
               

               
Cow position:
               
chr18:56330127-56329256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
601
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
810, 794
               

               
Conread position:
               
5-878
               

               
Cow position:
               
chr18:41197803-41198676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 82
               

               
Conread position:
               
5-878
               

               
Cow position:
               
chr18:43175548-43174675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
858, 802
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr18:42984911-42984481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-492
               

               
Cow position:
               
chr18:56247583-56247108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
6-532
               

               
Cow position:
               
chr18:49022791-49023317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 48
               

               
Conread position:
               
6-538
               

               
Cow position:
               
chr18:42744320-42743788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
422, 408
               

               
Conread position:
               
6-539
               

               
Cow position:
               
chr18:54968017-54968548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
6-574
               

               
Cow position:
               
chr18:50048742-50048180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 90
               

               
Conread position:
               
6-651
               

               
Cow position:
               
chr18:42675092-42674447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 321
               

               
Conread position:
               
6-659
               

               
Cow position:
               
chr18:54967849-54968500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 190
               

               
Conread position:
               
6-675
               

               
Cow position:
               
chr18:42960070-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 244
               

               
Conread position:
               
6-709
               

               
Cow position:
               
chr18:40075000-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 113
               

               
Conread position:
               
6-721
               

               
Cow position:
               
chr18:55067049-55066334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 77
               

               
Conread position:
               
6-738
               

               
Cow position:
               
chr18:44154138-44153425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
527, 155
               

               
Conread position:
               
6-744
               

               
Cow position:
               
chr18:42791192-42791931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
6-786
               

               
Cow position:
               
chr18:40086626-40085851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 26
               

               
Conread position:
               
6-786
               

               
Cow position:
               
chr18:41949203-41948423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-786
               

               
Cow position:
               
chr18:53559735-53560515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
785
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 168
               

               
Conread position:
               
6-786
               

               
Cow position:
               
chr18:55523537-55524317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
788
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 48
               

               
Conread position:
               
6-798
               

               
Cow position:
               
chr18:44398294-44397502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
793
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-829
               

               
Cow position:
               
chr18:50848479-50849302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
826
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 783
               

               
Conread position:
               
6-832
               

               
Cow position:
               
chr18:53559819-53560644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
832
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 98
               

               
Conread position:
               
6-849
               

               
Cow position:
               
chr18:50059646-50058804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
438, 434
               

               
Conread position:
               
6-851
               

               
Cow position:
               
chr18:53635983-53635139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
847
               

               
Alignm identity:
               
585
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
510, 505
               

               
Conread position:
               
6-876
               

               
Cow position:
               
chr18:53586854-53585986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
575
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 88
               

               
Conread position:
               
6-889
               

               
Cow position:
               
chr18:42693904-42693024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
890
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 92
               

               
Conread position:
               
7-281
               

               
Cow position:
               
chr18:42984742-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr18:49032312-49032000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-385
               

               
Cow position:
               
chr18:14453706-14453325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
77, 89
               

               
Conread position:
               
7-385
               

               
Cow position:
               
chr18:43174874-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
218, 212
               

               
Conread position:
               
7-401
               

               
Cow position:
               
chr18:52448010-52448406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
277, 0
               

               
Conread position:
               
7-477
               

               
Cow position:
               
chr18:52433716-52434185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 410
               

               
Conread position:
               
7-531
               

               
Cow position:
               
chr18:14453874-14453350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 87
               

               
Conread position:
               
7-573
               

               
Cow position:
               
chr18:51812487-51811920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
5, 411
               

               
Conread position:
               
7-699
               

               
Cow position:
               
chr18:42744487-42743795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-714
               

               
Cow position:
               
chr18:52428283-52428990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
612, 624
               

               
Conread position:
               
7-741
               

               
Cow position:
               
chr18:53525754-53526486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 341
               

               
Conread position:
               
7-755
               

               
Cow position:
               
chr18:53509300-53510047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 326
               

               
Conread position:
               
7-782
               

               
Cow position:
               
chr18:42675175-42674400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 236
               

               
Conread position:
               
7-784
               

               
Cow position:
               
chr18:55008455-55009230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 81
               

               
Conread position:
               
7-786
               

               
Cow position:
               
chr18:42790942-42791721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
783
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 238
               

               
Conread position:
               
7-786
               

               
Cow position:
               
chr18:42985498-42984719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
787
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 155
               

               
Conread position:
               
7-786
               

               
Cow position:
               
chr18:51812990-51812211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 411
               

               
Conread position:
               
7-786
               

               
Cow position:
               
chr18:54992966-54993745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 226
               

               
Conread position:
               
7-786
               

               
Cow position:
               
chr18:55523454-55524233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
785
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
7-787
               

               
Cow position:
               
chr18:40306231-40307011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 89
               

               
Conread position:
               
7-790
               

               
Cow position:
               
chr18:42694155-42693371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
792
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 140
               

               
Conread position:
               
7-847
               

               
Cow position:
               
chr18:52012463-52011626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
843
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
416, 16
               

               
Conread position:
               
7-848
               

               
Cow position:
               
chr18:40324822-40323982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
848
               

               
Alignm identity:
               
551
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 89
               

               
Conread position:
               
7-848
               

               
Cow position:
               
chr18:52447422-52448262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
421, 406
               

               
Conread position:
               
7-886
               

               
Cow position:
               
chr18:52433212-52434091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
882
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 150
               

               
Conread position:
               
7-893
               

               
Cow position:
               
chr18:53498031-53498919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
903
               

               
Alignm identity:
               
576
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 88
               

               
Conread position:
               
7-895
               

               
Cow position:
               
chr18:52447338-52448226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
894
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
421, 408
               

               
Conread position:
               
8-281
               

               
Cow position:
               
chr18:43022252-43021979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-289
               

               
Cow position:
               
chr18:56267397-56267116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-300
               

               
Cow position:
               
chr18:14453621-14453326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
140, 145
               

               
Conread position:
               
8-453
               

               
Cow position:
               
chr18:55497475-55497030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
410, 404
               

               
Conread position:
               
8-491
               

               
Cow position:
               
chr18:51789158-51788675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-544
               

               
Cow position:
               
chr18:56316532-56317068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
440, 445
               

               
Conread position:
               
8-571
               

               
Cow position:
               
chr18:49032563-49032000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 331
               

               
Conread position:
               
8-630
               

               
Cow position:
               
chr18:33064203-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 334
               

               
Conread position:
               
8-645
               

               
Cow position:
               
chr18:44154304-44153674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 0
               

               
Conread position:
               
8-651
               

               
Cow position:
               
chr18:52012212-52011569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 80
               

               
Conread position:
               
8-723
               

               
Cow position:
               
chr18:55523623-55524338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 227
               

               
Conread position:
               
8-758
               

               
Cow position:
               
chr18:53610404-53609654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
421, 403
               

               
Conread position:
               
8-787
               

               
Cow position:
               
chr18:51789830-51789051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
783
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 411
               

               
Conread position:
               
8-805
               

               
Cow position:
               
chr18:52012380-52011583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 248
               

               
Conread position:
               
8-831
               

               
Cow position:
               
chr18:53586936-53586114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
826
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 392
               

               
Conread position:
               
8-835
               

               
Cow position:
               
chr18:40306484-40307310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
830
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
8-839
               

               
Cow position:
               
chr18:56329872-56329042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
836
               

               
Alignm identity:
               
605
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 217
               

               
Conread position:
               
8-848
               

               
Cow position:
               
chr18:56329788-56328949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
842
               

               
Alignm identity:
               
605
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
807, 791
               

               
Conread position:
               
8-875
               

               
Cow position:
               
chr18:56128184-56129049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
605
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
507, 503
               

               
Conread position:
               
9-529
               

               
Cow position:
               
chr18:50281822-50282342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-615
               

               
Cow position:
               
chr18:49022710-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 209
               

               
Conread position:
               
9-636
               

               
Cow position:
               
chr18:14453956-14453326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
583, 574
               

               
Conread position:
               
9-689
               

               
Cow position:
               
chr18:50281654-50282334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
9-712
               

               
Cow position:
               
chr18:56391535-56390832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 242
               

               
Conread position:
               
9-714
               

               
Cow position:
               
chr18:52433466-52434171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
610, 622
               

               
Conread position:
               
9-743
               

               
Cow position:
               
chr18:55523372-55524106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 157
               

               
Conread position:
               
9-747
               

               
Cow position:
               
chr18:40306401-40307139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 74
               

               
Conread position:
               
9-750
               

               
Cow position:
               
chr18:50271441-50272180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 161
               

               
Conread position:
               
9-782
               

               
Cow position:
               
chr18:43093606-43092833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
775
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
9-786
               

               
Cow position:
               
chr18:42675257-42674480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
486, 491
               

               
Conread position:
               
9-786
               

               
Cow position:
               
chr18:50059391-50058614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-876
               

               
Cow position:
               
chr18:49033150-49032283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
595
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
805, 776
               

               
Conread position:
               
9-886
               

               
Cow position:
               
chr18:52428033-52428910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
882
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 148
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr18:42724187-42723910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-299
               

               
Cow position:
               
chr18:42693228-42692938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
10-328
               

               
Cow position:
               
chr18:55442331-55442649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr18:56267479-56267117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-497
               

               
Cow position:
               
chr18:50848988-50849475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
10-532
               

               
Cow position:
               
chr18:22844304-22843779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
163, 180
               

               
Conread position:
               
10-628
               

               
Cow position:
               
chr18:56316450-56317068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
420, 403
               

               
Conread position:
               
10-717
               

               
Cow position:
               
chr18:56247748-56247053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 182
               

               
Conread position:
               
10-741
               

               
Cow position:
               
chr18:53635643-53634913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 241
               

               
Conread position:
               
10-780
               

               
Cow position:
               
chr18:43167773-43168543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
571, 581
               

               
Conread position:
               
10-783
               

               
Cow position:
               
chr18:50848652-50849425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
775
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
493, 504
               

               
Conread position:
               
10-790
               

               
Cow position:
               
chr18:42791365-42792145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 170
               

               
Conread position:
               
10-790
               

               
Cow position:
               
chr18:56316114-56316894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
783
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
411, 398
               

               
Conread position:
               
10-832
               

               
Cow position:
               
chr18:42791785-42792606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
823
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
800, 0
               

               
Conread position:
               
10-835
               

               
Cow position:
               
chr18:33064705-33063881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
828
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 86
               

               
Conread position:
               
10-875
               

               
Cow position:
               
chr18:42791953-42792816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
417, 409
               

               
Conread position:
               
10-877
               

               
Cow position:
               
chr18:49022377-49023242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 201
               

               
Conread position:
               
11-290
               

               
Cow position:
               
chr18:50282076-50282355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-303
               

               
Cow position:
               
chr18:43174786-43174494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
130, 125
               

               
Conread position:
               
11-321
               

               
Cow position:
               
chr18:51367529-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-369
               

               
Cow position:
               
chr18:50246479-50246837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
229, 238
               

               
Conread position:
               
11-372
               

               
Cow position:
               
chr18:50295506-50295867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
66, 85
               

               
Conread position:
               
11-383
               

               
Cow position:
               
chr18:56128943-56129313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
335, 190
               

               
Conread position:
               
11-388
               

               
Cow position:
               
chr18:42792542-42792919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-411
               

               
Cow position:
               
chr18:51839243-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-458
               

               
Cow position:
               
chr18:42724354-42723907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
81, 85
               

               
Conread position:
               
11-469
               

               
Cow position:
               
chr18:43174954-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 83
               

               
Conread position:
               
11-480
               

               
Cow position:
               
chr18:22634706-22635175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
11-510
               

               
Cow position:
               
chr18:53560328-53560823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 327
               

               
Conread position:
               
11-528
               

               
Cow position:
               
chr18:43022501-43021984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-529
               

               
Cow position:
               
chr18:42724438-42723920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
11-539
               

               
Cow position:
               
chr18:43168026-43168554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-540
               

               
Cow position:
               
chr18:51400682-51401211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-548
               

               
Cow position:
               
chr18:54993558-54994093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
11-559
               

               
Cow position:
               
chr18:51839327-51838779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 85
               

               
Conread position:
               
11-562
               

               
Cow position:
               
chr18:51400598-51401149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 163
               

               
Conread position:
               
11-567
               

               
Cow position:
               
chr18:50250984-50251537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
11-574
               

               
Cow position:
               
chr18:50099713-50100276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 242
               

               
Conread position:
               
11-576
               

               
Cow position:
               
chr18:50281740-50282305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
11-582
               

               
Cow position:
               
chr18:51969491-51970052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
166, 123
               

               
Conread position:
               
11-616
               

               
Cow position:
               
chr18:50295254-50295859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 90
               

               
Conread position:
               
11-622
               

               
Cow position:
               
chr18:55497640-55497029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 240
               

               
Conread position:
               
11-629
               

               
Cow position:
               
chr18:1417984-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-649
               

               
Cow position:
               
chr18:50030919-50030281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 404
               

               
Conread position:
               
11-651
               

               
Cow position:
               
chr18:51367864-51367225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 55
               

               
Conread position:
               
11-658
               

               
Cow position:
               
chr18:50083768-50084417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
11-659
               

               
Cow position:
               
chr18:51752185-51751535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 181
               

               
Conread position:
               
11-682
               

               
Cow position:
               
chr18:51874045-51874709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 114
               

               
Conread position:
               
11-698
               

               
Cow position:
               
chr18:42985158-42984471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 148
               

               
Conread position:
               
11-707
               

               
Cow position:
               
chr18:44184652-44183956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 151
               

               
Conread position:
               
11-718
               

               
Cow position:
               
chr18:42792206-42792913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-732
               

               
Cow position:
               
chr18:50031000-50030282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 64
               

               
Conread position:
               
11-735
               

               
Cow position:
               
chr18:52447678-52448403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
609, 0
               

               
Conread position:
               
11-735
               

               
Cow position:
               
chr18:56434195-56434919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
11-736
               

               
Cow position:
               
chr18:54993222-54993945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 62
               

               
Conread position:
               
11-739
               

               
Cow position:
               
chr18:52012293-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 77
               

               
Conread position:
               
11-740
               

               
Cow position:
               
chr18:43120173-43119445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 214
               

               
Conread position:
               
11-741
               

               
Cow position:
               
chr18:40324650-40323921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 130
               

               
Conread position:
               
11-741
               

               
Cow position:
               
chr18:43120257-43119527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
399, 408
               

               
Conread position:
               
11-741
               

               
Cow position:
               
chr18:44184904-44184174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 149
               

               
Conread position:
               
11-741
               

               
Cow position:
               
chr18:51765680-51764950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
478, 473
               

               
Conread position:
               
11-741
               

               
Cow position:
               
chr18:53636062-53635332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 240
               

               
Conread position:
               
11-741
               

               
Cow position:
               
chr18:54979878-54980607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
11-741
               

               
Cow position:
               
chr18:56128103-56128833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 240
               

               
Conread position:
               
11-742
               

               
Cow position:
               
chr18:50099461-50100192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 147
               

               
Conread position:
               
11-743
               

               
Cow position:
               
chr18:50848569-50849301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 202
               

               
Conread position:
               
11-743
               

               
Cow position:
               
chr18:51789407-51788675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 163
               

               
Conread position:
               
11-744
               

               
Cow position:
               
chr18:50099293-50100026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 74
               

               
Conread position:
               
11-744
               

               
Cow position:
               
chr18:54967017-54967747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 240
               

               
Conread position:
               
11-745
               

               
Cow position:
               
chr18:51368452-51367719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
410, 403
               

               
Conread position:
               
11-747
               

               
Cow position:
               
chr18:55018114-55018852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
417, 398
               

               
Conread position:
               
11-749
               

               
Cow position:
               
chr18:50049073-50048335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 64
               

               
Conread position:
               
11-752
               

               
Cow position:
               
chr18:44253657-44252930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
166, 157
               

               
Conread position:
               
11-760
               

               
Cow position:
               
chr18:50083516-50084265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
673, 668
               

               
Conread position:
               
11-780
               

               
Cow position:
               
chr18:40074921-40075690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
775
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 97
               

               
Conread position:
               
11-783
               

               
Cow position:
               
chr18:51789491-51788719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
11-783
               

               
Cow position:
               
chr18:51812734-51811962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 150
               

               
Conread position:
               
11-785
               

               
Cow position:
               
chr18:40086448-40085683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
498, 232
               

               
Conread position:
               
11-785
               

               
Cow position:
               
chr18:42744567-42743793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
419, 400
               

               
Conread position:
               
11-785
               

               
Cow position:
               
chr18:44240075-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 85
               

               
Conread position:
               
11-785
               

               
Cow position:
               
chr18:44253741-44252981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 236
               

               
Conread position:
               
11-785
               

               
Cow position:
               
chr18:52428203-52428977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 156
               

               
Conread position:
               
11-785
               

               
Cow position:
               
chr18:52433384-52434158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 156
               

               
Conread position:
               
11-786
               

               
Cow position:
               
chr18:33064620-33063845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
11-786
               

               
Cow position:
               
chr18:40324734-40323959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
505, 486
               

               
Conread position:
               
11-786
               

               
Cow position:
               
chr18:41197977-41198752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-786
               

               
Cow position:
               
chr18:42791114-42791889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 84
               

               
Conread position:
               
11-786
               

               
Cow position:
               
chr18:50022337-50021556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
794
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
11-786
               

               
Cow position:
               
chr18:50059473-50058698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 261
               

               
Conread position:
               
11-786
               

               
Cow position:
               
chr18:51789575-51788800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 163
               

               
Conread position:
               
11-786
               

               
Cow position:
               
chr18:52447594-52448370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
417, 403
               

               
Conread position:
               
11-786
               

               
Cow position:
               
chr18:53559908-53560683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 244
               

               
Conread position:
               
11-786
               

               
Cow position:
               
chr18:54967437-54968207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 181
               

               
Conread position:
               
11-786
               

               
Cow position:
               
chr18:54979626-54980401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 234
               

               
Conread position:
               
11-786
               

               
Cow position:
               
chr18:54992802-54993577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 54
               

               
Conread position:
               
11-786
               

               
Cow position:
               
chr18:54993054-54993829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 243
               

               
Conread position:
               
11-786
               

               
Cow position:
               
chr18:56434111-56434885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 243
               

               
Conread position:
               
11-787
               

               
Cow position:
               
chr18:56128355-56129131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 72
               

               
Conread position:
               
11-790
               

               
Cow position:
               
chr18:43175290-43174511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-809
               

               
Cow position:
               
chr18:51400346-51401144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
804
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
11-826
               

               
Cow position:
               
chr18:50083432-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
821
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 85
               

               
Conread position:
               
11-826
               

               
Cow position:
               
chr18:51765932-51765118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
420, 409
               

               
Conread position:
               
11-831
               

               
Cow position:
               
chr18:42791534-42792353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
824
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 156
               

               
Conread position:
               
11-832
               

               
Cow position:
               
chr18:44398373-44397553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
823
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 85
               

               
Conread position:
               
11-832
               

               
Cow position:
               
chr18:56330037-56329217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
822
               

               
Alignm identity:
               
631
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
802, 0
               

               
Conread position:
               
11-834
               

               
Cow position:
               
chr18:50083348-50084170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
668, 672
               

               
Conread position:
               
11-840
               

               
Cow position:
               
chr18:42960233-42959414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
831
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 406
               

               
Conread position:
               
11-840
               

               
Cow position:
               
chr18:49032980-49032152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
831
               

               
Alignm identity:
               
576
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
804, 788
               

               
Conread position:
               
11-845
               

               
Cow position:
               
chr18:56329701-56328869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
839
               

               
Alignm identity:
               
602
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
419, 402
               

               
Conread position:
               
11-848
               

               
Cow position:
               
chr18:44239991-44240827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
840
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 150
               

               
Conread position:
               
11-877
               

               
Cow position:
               
chr18:33064788-33063924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
777, 786
               

               
Conread position:
               
11-877
               

               
Cow position:
               
chr18:56248175-56247311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
879
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 9
               

               
Conread position:
               
11-878
               

               
Cow position:
               
chr18:41197641-41198508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 242
               

               
Conread position:
               
11-878
               

               
Cow position:
               
chr18:42791282-42792149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 83
               

               
Conread position:
               
11-878
               

               
Cow position:
               
chr18:43022921-43022054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 153
               

               
Conread position:
               
11-878
               

               
Cow position:
               
chr18:43023005-43022138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 85
               

               
Conread position:
               
11-879
               

               
Cow position:
               
chr18:51368536-51367669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 176
               

               
Conread position:
               
11-882
               

               
Cow position:
               
chr18:50022253-50021378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
886
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 79
               

               
Conread position:
               
11-884
               

               
Cow position:
               
chr18:50059305-50058434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 93
               

               
Conread position:
               
11-886
               

               
Cow position:
               
chr18:51765848-51764973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
881
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
85, 81
               

               
Conread position:
               
11-890
               

               
Cow position:
               
chr18:51368200-51367322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
888
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 157
               

               
Conread position:
               
11-895
               

               
Cow position:
               
chr18:52447090-52447974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
889
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
417, 404
               

               
Conread position:
               
12-606
               

               
Cow position:
               
chr18:22634623-22635217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
84, 71
               

               
Conread position:
               
12-878
               

               
Cow position:
               
chr18:42985577-42984711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 173
               

               
Conread position:
               
13-786
               

               
Cow position:
               
chr18:51400264-51401037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 83
               

               
Conread position:
               
13-847
               

               
Cow position:
               
chr18:43023087-43022254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
837
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 319
               

               
Conread position:
               
13-878
               

               
Cow position:
               
chr18:42960315-42959459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
14-787
               

               
Cow position:
               
chr18:42694063-42693290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
16-435
               

               
Cow position:
               
chr18:43048741-43048322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 380
               

               
Conread position:
               
16-786
               

               
Cow position:
               
chr18:56316036-56316806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
19-785
               

               
Cow position:
               
chr18:49021311-49022071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
774
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
77, 71
               

               
Conread position:
               
23-322
               

               
Cow position:
               
chr18:50295602-50295900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
23-573
               

               
Cow position:
               
chr18:50246323-50246870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 146
               

               
Conread position:
               
23-601
               

               
Cow position:
               
chr18:43022573-43021995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 144
               

               
Conread position:
               
23-626
               

               
Cow position:
               
chr18:42724510-42723907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 162
               

               
Conread position:
               
23-635
               

               
Cow position:
               
chr18:50021902-50021287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
23-726
               

               
Cow position:
               
chr18:51839483-51838780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
571, 554
               

               
Conread position:
               
23-736
               

               
Cow position:
               
chr18:54967281-54967991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 136
               

               
Conread position:
               
23-741
               

               
Cow position:
               
chr18:54992898-54993616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 71
               

               
Conread position:
               
23-749
               

               
Cow position:
               
chr18:55008637-55009361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 65
               

               
Conread position:
               
23-768
               

               
Cow position:
               
chr18:53560088-53560829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 60
               

               
Conread position:
               
23-784
               

               
Cow position:
               
chr18:51400442-51401203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
485, 492
               

               
Conread position:
               
23-785
               

               
Cow position:
               
chr18:55067116-55066354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
23-786
               

               
Cow position:
               
chr18:43094000-43093249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
23-786
               

               
Cow position:
               
chr18:44184724-44183961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 241
               

               
Conread position:
               
23-786
               

               
Cow position:
               
chr18:52447522-52448285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
23-786
               

               
Cow position:
               
chr18:53587005-53586242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
23-786
               

               
Cow position:
               
chr18:55017790-55018553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 230
               

               
Conread position:
               
23-787
               

               
Cow position:
               
chr18:53610473-53609709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 390
               

               
Conread position:
               
23-797
               

               
Cow position:
               
chr18:50049145-50048371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
23-826
               

               
Cow position:
               
chr18:50848329-50849131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
805
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
470, 491
               

               
Conread position:
               
23-876
               

               
Cow position:
               
chr18:52447018-52447871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
856
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 73
               

               
Conread position:
               
23-878
               

               
Cow position:
               
chr18:44253813-44252972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 152
               

               
Conread position:
               
23-897
               

               
Cow position:
               
chr18:53498131-53499008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
891
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 72
               

               
Conread position:
               
24-750
               

               
Cow position:
               
chr18:56493839-56494563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
713, 677
               

               
Conread position:
               
24-785
               

               
Cow position:
               
chr18:54967783-54968542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
24-790
               

               
Cow position:
               
chr18:33064943-33064177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
771
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
26-731
               

               
Cow position:
               
chr18:44154370-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
28-805
               

               
Cow position:
               
chr18:49021149-49021923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 113
               

               
Conread position:
               
29-840
               

               
Cow position:
               
chr18:55523309-55524119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
816
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 7
               

               
Conread position:
               
32-848
               

               
Cow position:
               
chr18:56330184-56329369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
819
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 22
               

               
Conread position:
               
36-741
               

               
Cow position:
               
chr18:55017887-55018592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 136
               

               
Conread position:
               
36-787
               

               
Cow position:
               
chr18:56433894-56434635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
37-657
               

               
Cow position:
               
chr18:50031058-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
38-786
               

               
Cow position:
               
chr18:41197500-41198248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
465, 475
               

               
Conread position:
               
38-805
               

               
Cow position:
               
chr18:51765737-51764970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
771
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
209, 220
               

               
Conread position:
               
38-847
               

               
Cow position:
               
chr18:49033373-49032565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
813
               

               
Alignm identity:
               
565
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
38-867
               

               
Cow position:
               
chr18:43120314-43119485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
836
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
38-876
               

               
Cow position:
               
chr18:42744708-42743870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
842
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
717, 730
               

               
Conread position:
               
39-706
               

               
Cow position:
               
chr18:42724576-42723909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
593, 11
               

               
Conread position:
               
39-786
               

               
Cow position:
               
chr18:53587073-53586326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 203
               

               
Conread position:
               
39-797
               

               
Cow position:
               
chr18:44253881-44253136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 126
               

               
Conread position:
               
41-698
               

               
Cow position:
               
chr18:43022639-43021982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-736
               

               
Cow position:
               
chr18:55017976-55018671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 139
               

               
Conread position:
               
41-750
               

               
Cow position:
               
chr18:55008571-55009280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 129
               

               
Conread position:
               
41-797
               

               
Cow position:
               
chr18:40306181-40306937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 377
               

               
Conread position:
               
42-708
               

               
Cow position:
               
chr18:50295201-50295867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 152
               

               
Conread position:
               
42-709
               

               
Cow position:
               
chr18:14454007-14453340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 370
               

               
Conread position:
               
42-786
               

               
Cow position:
               
chr18:50083295-50084039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
381, 366
               

               
Conread position:
               
43-786
               

               
Cow position:
               
chr18:54979406-54980149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 297
               

               
Conread position:
               
43-786
               

               
Cow position:
               
chr18:55017729-55018469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 55
               

               
Conread position:
               
43-833
               

               
Cow position:
               
chr18:43175342-43174553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
793
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 378
               

               
Conread position:
               
43-878
               

               
Cow position:
               
chr18:41949334-41948499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
839
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 369
               

               
Conread position:
               
44-325
               

               
Cow position:
               
chr18:44818569-44818850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
45-705
               

               
Cow position:
               
chr18:55497690-55497030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 51
               

               
Conread position:
               
45-773
               

               
Cow position:
               
chr18:53509254-53509982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
45-830
               

               
Cow position:
               
chr18:53525708-53526490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
793
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
45-836
               

               
Cow position:
               
chr18:56493689-56494482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
801
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
46-412
               

               
Cow position:
               
chr18:56267527-56267161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
46-548
               

               
Cow position:
               
chr18:53571828-53572317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
46-772
               

               
Cow position:
               
chr18:56391582-56390856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 354
               

               
Conread position:
               
46-786
               

               
Cow position:
               
chr18:53559691-53560431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
47-786
               

               
Cow position:
               
chr18:53636110-53635371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
47-804
               

               
Cow position:
               
chr18:50099161-50099918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
762
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
47-835
               

               
Cow position:
               
chr18:56128055-56128842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
793
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
47-877
               

               
Cow position:
               
chr18:40324866-40324038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
833
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
622, 629
               

               
Conread position:
               
53-550
               

               
Cow position:
               
chr18:42827428-42827925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
458, 462
               

               
Conread position:
               
53-574
               

               
Cow position:
               
chr18:47846577-47846056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
53-575
               

               
Cow position:
               
chr18:33093082-33092560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
53-576
               

               
Cow position:
               
chr18:51838762-51838244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 114
               

               
Conread position:
               
53-579
               

               
Cow position:
               
chr18:51839369-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
53-648
               

               
Cow position:
               
chr18:49021510-49022103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
53-743
               

               
Cow position:
               
chr18:42675381-42674691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
446, 442
               

               
Conread position:
               
53-786
               

               
Cow position:
               
chr18:43175584-43174851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
53-790
               

               
Cow position:
               
chr18:42791660-42792397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
364, 356
               

               
Conread position:
               
53-805
               

               
Cow position:
               
chr18:51812860-51812108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 358
               

               
Conread position:
               
53-877
               

               
Cow position:
               
chr18:52446964-52447788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
830
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 108
               

               
Conread position:
               
54-741
               

               
Cow position:
               
chr18:49022589-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 10
               

               
Conread position:
               
54-782
               

               
Cow position:
               
chr18:56247788-56247070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 113
               

               
Conread position:
               
54-878
               

               
Cow position:
               
chr18:40324938-40324119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
830
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 10
               

               
Conread position:
               
55-835
               

               
Cow position:
               
chr18:42724730-42723951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
785
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
56-723
               

               
Cow position:
               
chr18:1417945-1418612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-785
               

               
Cow position:
               
chr18:54966894-54967623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 284
               

               
Conread position:
               
56-786
               

               
Cow position:
               
chr18:42837909-42837179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-805
               

               
Cow position:
               
chr18:51789614-51788865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 355
               

               
Conread position:
               
56-805
               

               
Cow position:
               
chr18:51969288-51970022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 24
               

               
Conread position:
               
56-886
               

               
Cow position:
               
chr18:52433093-52433923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
836
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 353
               

               
Conread position:
               
56-895
               

               
Cow position:
               
chr18:52427744-52428583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
845
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 359
               

               
Conread position:
               
57-787
               

               
Cow position:
               
chr18:1417862-1418592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
62-489
               

               
Cow position:
               
chr18:51367646-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
118, 113
               

               
Conread position:
               
62-786
               

               
Cow position:
               
chr18:50059674-50058950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
70-786
               

               
Cow position:
               
chr18:44239714-44240430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
83-784
               

               
Cow position:
               
chr18:42985590-42984889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 176
               

               
Conread position:
               
86-784
               

               
Cow position:
               
chr18:44154481-44153787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 161
               

               
Conread position:
               
86-876
               

               
Cow position:
               
chr18:41949375-41948585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
795
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
499, 492
               

               
Conread position:
               
90-780
               

               
Cow position:
               
chr18:49022202-49022893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 367
               

               
Conread position:
               
92-471
               

               
Cow position:
               
chr18:53598327-53597955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
367, 34
               

               
Conread position:
               
92-780
               

               
Cow position:
               
chr18:50281653-50282341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
92-783
               

               
Cow position:
               
chr18:50271440-50272131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 147
               

               
Conread position:
               
93-878
               

               
Cow position:
               
chr18:50245721-50246506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
798
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
32, 36
               

               
Conread position:
               
93-885
               

               
Cow position:
               
chr18:51368623-51367830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
798
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 392
               

               
Conread position:
               
94-416
               

               
Cow position:
               
chr18:55442331-55442653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 63
               

               
Conread position:
               
94-786
               

               
Cow position:
               
chr18:43167773-43168465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 10
               

               
Conread position:
               
95-762
               

               
Cow position:
               
chr18:51874045-51874705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
168, 114
               

               
Conread position:
               
95-783
               

               
Cow position:
               
chr18:56434111-56434798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
478, 490
               

               
Conread position:
               
95-825
               

               
Cow position:
               
chr18:44254073-44253349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 74
               

               
Conread position:
               
95-829
               

               
Cow position:
               
chr18:44184904-44184171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
95-863
               

               
Cow position:
               
chr18:52433048-52433815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 316
               

               
Conread position:
               
95-895
               

               
Cow position:
               
chr18:52427699-52428499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
804
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
403, 412
               

               
Conread position:
               
96-786
               

               
Cow position:
               
chr18:14454037-14453347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 288
               

               
Conread position:
               
99-786
               

               
Cow position:
               
chr18:52446926-52447613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 308
               

               
Conread position:
               
99-786
               

               
Cow position:
               
chr18:56316035-56316722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 154
               

               
Conread position:
               
99-786
               

               
Cow position:
               
chr18:56433786-56434466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 160
               

               
Conread position:
               
100-489
               

               
Cow position:
               
chr18:43048741-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 380
               

               
Conread position:
               
100-895
               

               
Cow position:
               
chr18:52427536-52428331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
799
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
570, 561
               

               
Conread position:
               
100-895
               

               
Cow position:
               
chr18:52432885-52433680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
799
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
101-737
               

               
Cow position:
               
chr18:33093118-33092482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
101-843
               

               
Cow position:
               
chr18:50083269-50084010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 156
               

               
Conread position:
               
102-574
               

               
Cow position:
               
chr18:42827394-42827865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
103-877
               

               
Cow position:
               
chr18:51400270-51401042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 311
               

               
Conread position:
               
104-804
               

               
Cow position:
               
chr18:51839486-51838786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 64
               

               
Conread position:
               
107-773
               

               
Cow position:
               
chr18:42724594-42723928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
107-786
               

               
Cow position:
               
chr18:50022496-50021811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 191
               

               
Conread position:
               
107-786
               

               
Cow position:
               
chr18:55067116-55066437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 144
               

               
Conread position:
               
107-809
               

               
Cow position:
               
chr18:51969018-51969699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
107-832
               

               
Cow position:
               
chr18:53509232-53509956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 303
               

               
Conread position:
               
107-838
               

               
Cow position:
               
chr18:53525686-53526416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 303
               

               
Conread position:
               
107-848
               

               
Cow position:
               
chr18:43167618-43168358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 144
               

               
Conread position:
               
107-878
               

               
Cow position:
               
chr18:50848080-50848848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 79
               

               
Conread position:
               
108-778
               

               
Cow position:
               
chr18:56493839-56494508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 305
               

               
Conread position:
               
108-878
               

               
Cow position:
               
chr18:42744722-42743952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
774
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 305
               

               
Conread position:
               
109-826
               

               
Cow position:
               
chr18:50245989-50246705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 59
               

               
Conread position:
               
111-756
               

               
Cow position:
               
chr18:50031068-50030421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 135
               

               
Conread position:
               
112-786
               

               
Cow position:
               
chr18:40306169-40306842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
113-531
               

               
Cow position:
               
chr18:14453288-14452870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 401
               

               
Conread position:
               
113-787
               

               
Cow position:
               
chr18:42675489-42674815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
554, 548
               

               
Conread position:
               
113-829
               

               
Cow position:
               
chr18:43167707-43168423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 701
               

               
Conread position:
               
115-846
               

               
Cow position:
               
chr18:56330185-56329455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 305
               

               
Conread position:
               
115-878
               

               
Cow position:
               
chr18:42837934-42837171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 298
               

               
Conread position:
               
116-741
               

               
Cow position:
               
chr18:50250922-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
117-876
               

               
Cow position:
               
chr18:49033378-49032619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
117-878
               

               
Cow position:
               
chr18:43120319-43119558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 58
               

               
Conread position:
               
122-786
               

               
Cow position:
               
chr18:42675396-42674732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 301
               

               
Conread position:
               
122-826
               

               
Cow position:
               
chr18:53610542-53609839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
122-830
               

               
Cow position:
               
chr18:41197500-41198207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 385
               

               
Conread position:
               
129-536
               

               
Cow position:
               
chr18:56267528-56267121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
129-633
               

               
Cow position:
               
chr18:53571827-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
245, 172
               

               
Conread position:
               
129-785
               

               
Cow position:
               
chr18:53559690-53560346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 110
               

               
Conread position:
               
130-774
               

               
Cow position:
               
chr18:55497689-55497045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 121
               

               
Conread position:
               
130-786
               

               
Cow position:
               
chr18:40074875-40075528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 52
               

               
Conread position:
               
131-780
               

               
Cow position:
               
chr18:49021504-49022151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 36
               

               
Conread position:
               
131-832
               

               
Cow position:
               
chr18:53636110-53635410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
131-833
               

               
Cow position:
               
chr18:43175590-43174889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 294
               

               
Conread position:
               
137-786
               

               
Cow position:
               
chr18:51839537-51838888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
278, 286
               

               
Conread position:
               
137-836
               

               
Cow position:
               
chr18:49021090-49021785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
138-839
               

               
Cow position:
               
chr18:56247788-56247098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 0
               

               
Conread position:
               
140-786
               

               
Cow position:
               
chr18:56315824-56316470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 92
               

               
Conread position:
               
153-878
               

               
Cow position:
               
chr18:50271417-50272142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 186
               

               
Conread position:
               
167-854
               

               
Cow position:
               
chr18:41949378-41948692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 250
               

               
Conread position:
               
169-804
               

               
Cow position:
               
chr18:50281646-50282281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
170-786
               

               
Cow position:
               
chr18:54992709-54993325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 81
               

               
Conread position:
               
177-786
               

               
Cow position:
               
chr18:40086956-40086345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
177-826
               

               
Cow position:
               
chr18:50245721-50246369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
32, 36
               

               
Conread position:
               
179-790
               

               
Cow position:
               
chr18:51400175-51400789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 237
               

               
Conread position:
               
186-495
               

               
Cow position:
               
chr18:55442339-55442648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
190-786
               

               
Cow position:
               
chr18:51789899-51789304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
191-573
               

               
Cow position:
               
chr18:43048734-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 51
               

               
Conread position:
               
191-775
               

               
Cow position:
               
chr18:51874057-51874634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
239, 102
               

               
Conread position:
               
191-780
               

               
Cow position:
               
chr18:56391521-56390932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 293
               

               
Conread position:
               
191-786
               

               
Cow position:
               
chr18:55067116-55066521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 65
               

               
Conread position:
               
197-633
               

               
Cow position:
               
chr18:14453288-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 316
               

               
Conread position:
               
197-711
               

               
Cow position:
               
chr18:42724840-42724326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
67, 61
               

               
Conread position:
               
197-834
               

               
Cow position:
               
chr18:53587083-53586447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 214
               

               
Conread position:
               
200-465
               

               
Cow position:
               
chr18:43053456-43053191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
221, 209
               

               
Conread position:
               
200-715
               

               
Cow position:
               
chr18:42827407-42827922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
200-886
               

               
Cow position:
               
chr18:42960296-42959619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
463, 470
               

               
Conread position:
               
201-766
               

               
Cow position:
               
chr18:14454016-14453450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 218
               

               
Conread position:
               
201-786
               

               
Cow position:
               
chr18:43120403-43119818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
202-743
               

               
Cow position:
               
chr18:33093101-33092560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 291
               

               
Conread position:
               
202-783
               

               
Cow position:
               
chr18:50031061-50030478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 130
               

               
Conread position:
               
206-832
               

               
Cow position:
               
chr18:56391590-56390965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 199
               

               
Conread position:
               
210-877
               

               
Cow position:
               
chr18:50295201-50295868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
540, 536
               

               
Conread position:
               
214-835
               

               
Cow position:
               
chr18:56128054-56128674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
214-876
               

               
Cow position:
               
chr18:53636111-53635449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
650, 592
               

               
Conread position:
               
215-626
               

               
Cow position:
               
chr18:56267526-56267113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
401, 0
               

               
Conread position:
               
215-717
               

               
Cow position:
               
chr18:53571829-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
215-805
               

               
Cow position:
               
chr18:51813034-51812444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
209, 200
               

               
Conread position:
               
222-809
               

               
Cow position:
               
chr18:51839536-51838949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
199, 191
               

               
Conread position:
               
223-529
               

               
Cow position:
               
chr18:56391960-56391654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
188, 200
               

               
Conread position:
               
224-786
               

               
Cow position:
               
chr18:53497999-53498561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
224-786
               

               
Cow position:
               
chr18:54966894-54967456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
242-878
               

               
Cow position:
               
chr18:42675528-42674892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 36
               

               
Conread position:
               
249-780
               

               
Cow position:
               
chr18:50031098-50030565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 167
               

               
Conread position:
               
254-786
               

               
Cow position:
               
chr18:53587110-53586578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
254-878
               

               
Cow position:
               
chr18:42675597-42674976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
254-878
               

               
Cow position:
               
chr18:42837963-42837339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 158
               

               
Conread position:
               
255-717
               

               
Cow position:
               
chr18:14453314-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 321
               

               
Conread position:
               
256-886
               

               
Cow position:
               
chr18:44398464-44397834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
257-786
               

               
Cow position:
               
chr18:50059731-50059202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
388, 383
               

               
Conread position:
               
257-786
               

               
Cow position:
               
chr18:55008453-55008980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
167, 99
               

               
Conread position:
               
258-786
               

               
Cow position:
               
chr18:42790941-42791469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 257
               

               
Conread position:
               
261-790
               

               
Cow position:
               
chr18:42827384-42827913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
261-849
               

               
Cow position:
               
chr18:1417814-1418401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
550, 528
               

               
Conread position:
               
262-829
               

               
Cow position:
               
chr18:43023090-43022524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
545, 0
               

               
Conread position:
               
263-738
               

               
Cow position:
               
chr18:54979374-54979849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
163, 169
               

               
Conread position:
               
264-782
               

               
Cow position:
               
chr18:14454037-14453519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 149
               

               
Conread position:
               
264-821
               

               
Cow position:
               
chr18:22634623-22635179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
115, 107
               

               
Conread position:
               
264-895
               

               
Cow position:
               
chr18:52427532-52428163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
166, 149
               

               
Conread position:
               
264-895
               

               
Cow position:
               
chr18:52432881-52433512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
166, 149
               

               
Conread position:
               
265-831
               

               
Cow position:
               
chr18:56315781-56316346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
141, 136
               

               
Conread position:
               
266-876
               

               
Cow position:
               
chr18:49033397-49032787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 69
               

               
Conread position:
               
268-657
               

               
Cow position:
               
chr18:43048741-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 327
               

               
Conread position:
               
274-886
               

               
Cow position:
               
chr18:51752341-51751730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
277-829
               

               
Cow position:
               
chr18:43094163-43093627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
390, 72
               

               
Conread position:
               
279-832
               

               
Cow position:
               
chr18:55523306-55523857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
534, 0
               

               
Conread position:
               
281-774
               

               
Cow position:
               
chr18:42724840-42724347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 48
               

               
Conread position:
               
284-821
               

               
Cow position:
               
chr18:50250845-50251369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
145, 55
               

               
Conread position:
               
290-787
               

               
Cow position:
               
chr18:33093096-33092600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
298-689
               

               
Cow position:
               
chr18:56267527-56267136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
298-785
               

               
Cow position:
               
chr18:53571828-53572302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
135, 121
               

               
Conread position:
               
300-788
               

               
Cow position:
               
chr18:56267612-56267120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
305-886
               

               
Cow position:
               
chr18:51839537-51838956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 120
               

               
Conread position:
               
330-741
               

               
Cow position:
               
chr18:43023106-43022695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
102, 85
               

               
Conread position:
               
338-897
               

               
Cow position:
               
chr18:51813076-51812521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
343-786
               

               
Cow position:
               
chr18:42827382-42827825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
344-742
               

               
Cow position:
               
chr18:53636149-53635751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
344-750
               

               
Cow position:
               
chr18:56128016-56128422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
88, 73
               

               
Conread position:
               
344-786
               

               
Cow position:
               
chr18:1417813-1418255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
347-742
               

               
Cow position:
               
chr18:53598324-53597937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
233, 31
               

               
Conread position:
               
356-741
               

               
Cow position:
               
chr18:33093115-33092730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
356-741
               

               
Cow position:
               
chr18:43048737-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
359-786
               

               
Cow position:
               
chr18:55523302-55523729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
299, 308
               

               
Conread position:
               
362-753
               

               
Cow position:
               
chr18:56248239-56247856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
365-783
               

               
Cow position:
               
chr18:14453288-14452870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
376-790
               

               
Cow position:
               
chr18:55497695-55497281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
377-772
               

               
Cow position:
               
chr18:53571823-53572207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
377-786
               

               
Cow position:
               
chr18:53559686-53560095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
223, 217
               

               
Conread position:
               
377-886
               

               
Cow position:
               
chr18:51839549-51839040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
385-633
               

               
Cow position:
               
chr18:43053439-43053191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
400-786
               

               
Cow position:
               
chr18:54966818-54967204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
400-878
               

               
Cow position:
               
chr18:50059672-50059194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
462, 424
               

               
Conread position:
               
411-829
               

               
Cow position:
               
chr18:14454057-14453641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
421-826
               

               
Cow position:
               
chr18:42790936-42791340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
257, 244
               

               
Conread position:
               
426-826
               

               
Cow position:
               
chr18:50049250-50048847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 240
               

               
Conread position:
               
429-746
               

               
Cow position:
               
chr18:54979372-54979689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
429-758
               

               
Cow position:
               
chr18:55568685-55568365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
238, 0
               

               
Conread position:
               
432-754
               

               
Cow position:
               
chr18:53636145-53635823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
432-787
               

               
Cow position:
               
chr18:56128020-56128375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
433-885
               

               
Cow position:
               
chr18:51400264-51400716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
173, 151
               

               
Conread position:
               
440-784
               

               
Cow position:
               
chr18:43048737-43048393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
440-786
               

               
Cow position:
               
chr18:33093115-33092769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
441-882
               

               
Cow position:
               
chr18:42790873-42791313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
242, 5
               

               
Conread position:
               
449-854
               

               
Cow position:
               
chr18:14453288-14452884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 0
               

               
Conread position:
               
451-717
               

               
Cow position:
               
chr18:43053457-43053191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
477-786
               

               
Cow position:
               
chr18:50098919-50099228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
489-786
               

               
Cow position:
               
chr18:50281630-50281927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
512-786
               

               
Cow position:
               
chr18:42985581-42985307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
172, 167
               

               
Conread position:
               
515-836
               

               
Cow position:
               
chr18:56267478-56267158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
292, 298
               

               
Conread position:
               
518-786
               

               
Cow position:
               
chr18:53509224-53509491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
518-786
               

               
Cow position:
               
chr18:53525678-53525945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
519-797
               

               
Cow position:
               
chr18:42827390-42827668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
520-876
               

               
Cow position:
               
chr18:43048741-43048385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
232, 214
               

               
Conread position:
               
524-886
               

               
Cow position:
               
chr18:42744726-42744364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
339, 283
               

               
Conread position:
               
533-835
               

               
Cow position:
               
chr18:56330187-56329886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
281, 252
               

               
Conread position:
               
546-786
               

               
Cow position:
               
chr18:56248225-56247990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
550-804
               

               
Cow position:
               
chr18:55497689-55497435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-829
               

               
Cow position:
               
chr18:55075112-55075384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
168, 240
               

               
Conread position:
               
634-797
               

               
Cow position:
               
chr18:56267527-56267364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.