Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8010C13.3
        

               Conread position:
               2-531
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 246
               

               Conread position:
               5-330
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               80, 89
               

               Conread position:
               5-461
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               391, 411
               

               Conread position:
               5-538
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               392, 398
               

               Conread position:
               5-618
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-696
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 252
               

               Conread position:
               5-772
               

               Cow position:
               
               

               Alignm length:
               769
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 250
               

               Conread position:
               5-780
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 109
               

               Conread position:
               5-786
               

               Cow position:
               
               

               Alignm length:
               785
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               423, 408
               

               Conread position:
               5-786
               

               Cow position:
               
               

               Alignm length:
               784
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               427, 414
               

               Conread position:
               5-786
               

               Cow position:
               
               

               Alignm length:
               786
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 247
               

               Conread position:
               5-829
               

               Cow position:
               
               

               Alignm length:
               827
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               586, 572
               

               Conread position:
               6-568
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 336
               

               Conread position:
               7-289
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-878
               

               Cow position:
               
               

               Alignm length:
               873
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               856, 803
               

               Conread position:
               7-889
               

               Cow position:
               
               

               Alignm length:
               885
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               353, 344
               

               Conread position:
               8-545
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               472, 487
               

               Conread position:
               8-702
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 88
               

               Conread position:
               9-878
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 45
               

               Conread position:
               10-540
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 148
               

               Conread position:
               10-786
               

               Cow position:
               
               

               Alignm length:
               781
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 158
               

               Conread position:
               10-809
               

               Cow position:
               
               

               Alignm length:
               806
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 163
               

               Conread position:
               10-876
               

               Cow position:
               
               

               Alignm length:
               868
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               853, 800
               

               Conread position:
               11-374
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               11-498
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               417, 84
               

               Conread position:
               11-509
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 62
               

               Conread position:
               11-629
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               412, 403
               

               Conread position:
               11-708
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 177
               

               Conread position:
               11-711
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               636, 27
               

               Conread position:
               11-753
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               672, 668
               

               Conread position:
               11-786
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               412, 88
               

               Conread position:
               11-786
               

               Cow position:
               
               

               Alignm length:
               776
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-786
               

               Cow position:
               
               

               Alignm length:
               776
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-804
               

               Cow position:
               
               

               Alignm length:
               795
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 153
               

               Conread position:
               11-805
               

               Cow position:
               
               

               Alignm length:
               796
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               398, 406
               

               Conread position:
               11-829
               

               Cow position:
               
               

               Alignm length:
               824
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 156
               

               Conread position:
               11-846
               

               Cow position:
               
               

               Alignm length:
               838
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               416, 397
               

               Conread position:
               11-877
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               545
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 147
               

               Conread position:
               14-829
               

               Cow position:
               
               

               Alignm length:
               818
               

               Alignm identity:
               547
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 82
               

               Conread position:
               16-657
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               412, 399
               

               Conread position:
               16-681
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 82
               

               Conread position:
               16-786
               

               Cow position:
               
               

               Alignm length:
               773
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 243
               

               Conread position:
               17-848
               

               Cow position:
               
               

               Alignm length:
               838
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               23-826
               

               Cow position:
               
               

               Alignm length:
               811
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 159
               

               Conread position:
               23-833
               

               Cow position:
               
               

               Alignm length:
               817
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 60
               

               Conread position:
               24-848
               

               Cow position:
               
               

               Alignm length:
               827
               

               Alignm identity:
               545
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               539, 548
               

               Conread position:
               32-786
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               613, 606
               

               Conread position:
               38-878
               

               Cow position:
               
               

               Alignm length:
               844
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               392, 372
               

               Conread position:
               41-829
               

               Cow position:
               
               

               Alignm length:
               792
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 181
               

               Conread position:
               53-772
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               56-743
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               353, 295
               

               Conread position:
               92-496
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               111, 93
               

               Conread position:
               99-835
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               708, 0
               

               Conread position:
               107-741
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               337, 328
               

               Conread position:
               113-878
               

               Cow position:
               
               

               Alignm length:
               767
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               750, 694
               

               Conread position:
               115-787
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-573
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               37, 48
               

               Conread position:
               131-790
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 56
               

               Conread position:
               188-576
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               196-876
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               667, 614
               

               Conread position:
               201-829
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               483, 214
               

               Conread position:
               207-825
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 225
               

               Conread position:
               214-848
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 9
               

               Conread position:
               220-786
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 54
               

               Conread position:
               259-806
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 150
               

               Conread position:
               261-845
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               563, 189
               

               Conread position:
               263-750
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               305
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               421, 81
               

               Conread position:
               264-878
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 5
               

               Conread position:
               344-854
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 188
               

               Conread position:
               345-741
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               74, 84
               

               Conread position:
               361-835
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 51
               

               Conread position:
               368-834
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 209
               

               Conread position:
               514-949
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               344, 296
               
Show alignments to all cow chromosomes.