Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8010C13.3
        

               Conread position:
               3-361
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 93
               

               Conread position:
               3-392
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-406
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-412
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               387, 372
               

               Conread position:
               3-447
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               412, 420
               

               Conread position:
               3-608
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               553, 539
               

               Conread position:
               5-216
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               87, 91
               

               Conread position:
               5-510
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-519
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               504, 0
               

               Conread position:
               5-545
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 91
               

               Conread position:
               5-782
               

               Cow position:
               
               

               Alignm length:
               780
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 91
               

               Conread position:
               6-290
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-623
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               611, 0
               

               Conread position:
               6-653
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 90
               

               Conread position:
               6-708
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 95
               

               Conread position:
               7-533
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 289
               

               Conread position:
               8-624
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               9-775
               

               Cow position:
               
               

               Alignm length:
               786
               

               Alignm identity:
               466
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               68, 78
               

               Conread position:
               10-541
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-292
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 0
               

               Conread position:
               11-292
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               185, 196
               

               Conread position:
               11-520
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               417, 59
               

               Conread position:
               11-667
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               414
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               135, 140
               

               Conread position:
               11-785
               

               Cow position:
               
               

               Alignm length:
               777
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 116
               

               Conread position:
               11-849
               

               Cow position:
               
               

               Alignm length:
               842
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 85
               

               Conread position:
               12-876
               

               Cow position:
               
               

               Alignm length:
               870
               

               Alignm identity:
               554
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 10
               

               Conread position:
               15-579
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 252
               

               Conread position:
               16-328
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               299, 0
               

               Conread position:
               16-750
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 85
               

               Conread position:
               25-474
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               423, 0
               

               Conread position:
               27-361
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               121, 126
               

               Conread position:
               27-826
               

               Cow position:
               
               

               Alignm length:
               804
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 319
               

               Conread position:
               37-663
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               38-711
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 48
               

               Conread position:
               41-496
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               418, 0
               

               Conread position:
               42-606
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               47-696
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 49
               

               Conread position:
               53-379
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               53-445
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               379, 372
               

               Conread position:
               75-772
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               82-877
               

               Cow position:
               
               

               Alignm length:
               800
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 55
               

               Conread position:
               92-844
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 54
               

               Conread position:
               95-666
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 67
               

               Conread position:
               106-743
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 81
               

               Conread position:
               108-462
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               11, 302
               

               Conread position:
               109-559
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 301
               

               Conread position:
               109-699
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 241
               

               Conread position:
               111-776
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               131-540
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 128
               

               Conread position:
               182-785
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 236
               

               Conread position:
               199-832
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               208-531
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               209-849
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               604, 0
               

               Conread position:
               215-576
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 198
               

               Conread position:
               224-775
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 35
               

               Conread position:
               224-790
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-713
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               262-835
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 68
               

               Conread position:
               278-833
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               535, 0
               

               Conread position:
               284-846
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               293-574
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               67, 57
               

               Conread position:
               299-696
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 119
               

               Conread position:
               305-835
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 127
               

               Conread position:
               344-780
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               344-786
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 7
               

               Conread position:
               376-708
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 37
               

               Conread position:
               378-848
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               430, 410
               

               Conread position:
               423-741
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               442-805
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               151, 158
               

               Conread position:
               444-783
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               445-866
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               377, 343
               

               Conread position:
               447-790
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               48, 37
               

               Conread position:
               447-875
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               270
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               48, 37
               

               Conread position:
               544-889
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               319, 269
               

               Conread position:
               551-876
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               133, 128
               
Show alignments to all cow chromosomes.