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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8010C13.3
        

               
Conread position:
               
1-742
               

               
Cow position:
               
chr25:36800684-36801413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 102
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr25:34733955-34733702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-334
               

               
Cow position:
               
chr25:33530451-33530783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-773
               

               
Cow position:
               
chr25:36800517-36801288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 102
               

               
Conread position:
               
2-782
               

               
Cow position:
               
chr25:33298617-33299397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 84
               

               
Conread position:
               
2-787
               

               
Cow position:
               
chr25:34770070-34769285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr25:33506803-33507129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-445
               

               
Cow position:
               
chr25:25652915-25653357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 154
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr25:3664154-3664598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
396, 401
               

               
Conread position:
               
3-713
               

               
Cow position:
               
chr25:326552-327268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 417
               

               
Conread position:
               
3-714
               

               
Cow position:
               
chr25:34732469-34731757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 160
               

               
Conread position:
               
3-807
               

               
Cow position:
               
chr25:25652243-25653047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
809
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 256
               

               
Conread position:
               
3-836
               

               
Cow position:
               
chr25:25652411-25653243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
839
               

               
Alignm identity:
               
553
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 250
               

               
Conread position:
               
3-885
               

               
Cow position:
               
chr25:25652327-25653209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
887
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
396, 401
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr25:33145155-33145436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-411
               

               
Cow position:
               
chr25:23420440-23420846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-467
               

               
Cow position:
               
chr25:33127775-33128237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 409
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr25:3664072-3664598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 252
               

               
Conread position:
               
5-652
               

               
Cow position:
               
chr25:33157416-33156768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
636, 622
               

               
Conread position:
               
5-660
               

               
Cow position:
               
chr25:34769899-34769244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 410
               

               
Conread position:
               
5-732
               

               
Cow position:
               
chr25:34732551-34731824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 234
               

               
Conread position:
               
5-742
               

               
Cow position:
               
chr25:25652581-25653318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 81
               

               
Conread position:
               
5-743
               

               
Cow position:
               
chr25:34769983-34769245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 408
               

               
Conread position:
               
5-776
               

               
Cow position:
               
chr25:34762970-34763735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 91
               

               
Conread position:
               
5-783
               

               
Cow position:
               
chr25:34433581-34434341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
405, 35
               

               
Conread position:
               
5-786
               

               
Cow position:
               
chr25:33298788-33299569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-835
               

               
Cow position:
               
chr25:34770151-34769322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
583
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 91
               

               
Conread position:
               
5-849
               

               
Cow position:
               
chr25:34446995-34447830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
845
               

               
Alignm identity:
               
568
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
711, 0
               

               
Conread position:
               
6-362
               

               
Cow position:
               
chr25:33145072-33145428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
69, 98
               

               
Conread position:
               
6-576
               

               
Cow position:
               
chr25:34713924-34714494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
71, 81
               

               
Conread position:
               
6-840
               

               
Cow position:
               
chr25:34762887-34763714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
836
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
474, 256
               

               
Conread position:
               
7-506
               

               
Cow position:
               
chr25:23420358-23420856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
493, 0
               

               
Conread position:
               
8-786
               

               
Cow position:
               
chr25:33298875-33299653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 78
               

               
Conread position:
               
8-786
               

               
Cow position:
               
chr25:33306321-33305552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
790
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 28
               

               
Conread position:
               
9-375
               

               
Cow position:
               
chr25:4657404-4657038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
81, 74
               

               
Conread position:
               
9-460
               

               
Cow position:
               
chr25:34473652-34474100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
164, 168
               

               
Conread position:
               
9-675
               

               
Cow position:
               
chr25:33530122-33530788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 159
               

               
Conread position:
               
9-696
               

               
Cow position:
               
chr25:25652669-25653356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 242
               

               
Conread position:
               
9-826
               

               
Cow position:
               
chr25:25652501-25653317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
474, 479
               

               
Conread position:
               
10-530
               

               
Cow position:
               
chr25:36801437-36801957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-620
               

               
Cow position:
               
chr25:3663993-3664603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 247
               

               
Conread position:
               
10-696
               

               
Cow position:
               
chr25:34713844-34714530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
10-708
               

               
Cow position:
               
chr25:33299129-33299827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 82
               

               
Conread position:
               
11-267
               

               
Cow position:
               
chr25:23420614-23420870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-364
               

               
Cow position:
               
chr25:3676055-3676408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-374
               

               
Cow position:
               
chr25:22235976-22236339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
161, 157
               

               
Conread position:
               
11-406
               

               
Cow position:
               
chr25:3636415-3636020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-458
               

               
Cow position:
               
chr25:23267433-23266993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
81, 85
               

               
Conread position:
               
11-530
               

               
Cow position:
               
chr25:34763225-34763741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 231
               

               
Conread position:
               
11-532
               

               
Cow position:
               
chr25:34473570-34474089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
160, 154
               

               
Conread position:
               
11-737
               

               
Cow position:
               
chr25:33157494-33156767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
11-742
               

               
Cow position:
               
chr25:33306235-33305512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
11-780
               

               
Cow position:
               
chr25:33298962-33299731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-780
               

               
Cow position:
               
chr25:33299046-33299815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-820
               

               
Cow position:
               
chr25:36801198-36801990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
810
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
11-881
               

               
Cow position:
               
chr25:33298710-33299578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
568
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
796, 0
               

               
Conread position:
               
14-746
               

               
Cow position:
               
chr25:36800613-36801344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 394
               

               
Conread position:
               
14-790
               

               
Cow position:
               
chr25:326479-327261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 244
               

               
Conread position:
               
19-368
               

               
Cow position:
               
chr25:3636323-3635974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
158, 148
               

               
Conread position:
               
20-510
               

               
Cow position:
               
chr25:24385260-24384770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 149
               

               
Conread position:
               
22-584
               

               
Cow position:
               
chr25:24385342-24384780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-270
               

               
Cow position:
               
chr25:3676151-3676398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-374
               

               
Cow position:
               
chr25:36844545-36844203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
240, 189
               

               
Conread position:
               
23-507
               

               
Cow position:
               
chr25:3636487-3636003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
375, 381
               

               
Conread position:
               
23-786
               

               
Cow position:
               
chr25:33298470-33299233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 231
               

               
Conread position:
               
23-800
               

               
Cow position:
               
chr25:33305971-33305225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
488, 26
               

               
Conread position:
               
25-786
               

               
Cow position:
               
chr25:34732615-34731854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 306
               

               
Conread position:
               
26-464
               

               
Cow position:
               
chr25:36844626-36844197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
27-454
               

               
Cow position:
               
chr25:346443-346869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
155, 162
               

               
Conread position:
               
29-386
               

               
Cow position:
               
chr25:34734012-34733655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
343, 355
               

               
Conread position:
               
29-701
               

               
Cow position:
               
chr25:3663928-3664600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 26
               

               
Conread position:
               
31-809
               

               
Cow position:
               
chr25:25652187-25652965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
377, 392
               

               
Conread position:
               
32-786
               

               
Cow position:
               
chr25:24399227-24398488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
453, 180
               

               
Conread position:
               
35-564
               

               
Cow position:
               
chr25:3636559-3636030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 133
               

               
Conread position:
               
37-459
               

               
Cow position:
               
chr25:4657460-4657038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 132
               

               
Conread position:
               
37-530
               

               
Cow position:
               
chr25:34714039-34714532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
293, 300
               

               
Conread position:
               
38-542
               

               
Cow position:
               
chr25:22235835-22236339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
38-780
               

               
Cow position:
               
chr25:33298569-33299311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
646, 641
               

               
Conread position:
               
45-786
               

               
Cow position:
               
chr25:33157544-33156803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
46-494
               

               
Cow position:
               
chr25:33529028-33529476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
135, 122
               

               
Conread position:
               
46-783
               

               
Cow position:
               
chr25:34446952-34447689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
386, 368
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:33506763-33507127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
357, 352
               

               
Conread position:
               
47-412
               

               
Cow position:
               
chr25:414681-414319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
166, 178
               

               
Conread position:
               
47-445
               

               
Cow position:
               
chr25:3676007-3676405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
352, 357
               

               
Conread position:
               
49-591
               

               
Cow position:
               
chr25:23420316-23420858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-533
               

               
Cow position:
               
chr25:33127738-33128219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 371
               

               
Conread position:
               
53-574
               

               
Cow position:
               
chr25:33144870-33145388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 161
               

               
Conread position:
               
53-806
               

               
Cow position:
               
chr25:34713719-34714472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 63
               

               
Conread position:
               
67-615
               

               
Cow position:
               
chr25:33127669-33128217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
86-567
               

               
Cow position:
               
chr25:18642201-18641708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
76, 84
               

               
Conread position:
               
93-658
               

               
Cow position:
               
chr25:33305423-33304866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
382, 14
               

               
Conread position:
               
94-886
               

               
Cow position:
               
chr25:36800525-36801317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
797
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
95-696
               

               
Cow position:
               
chr25:34763141-34763739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 304
               

               
Conread position:
               
97-445
               

               
Cow position:
               
chr25:427226-427574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
98-626
               

               
Cow position:
               
chr25:22235811-22236339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
104-878
               

               
Cow position:
               
chr25:34762901-34763669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 193
               

               
Conread position:
               
106-839
               

               
Cow position:
               
chr25:33298469-33299201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
433, 420
               

               
Conread position:
               
109-723
               

               
Cow position:
               
chr25:33127621-33128241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 72
               

               
Conread position:
               
109-807
               

               
Cow position:
               
chr25:33530053-33530752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
110-549
               

               
Cow position:
               
chr25:36844626-36844196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
155, 149
               

               
Conread position:
               
111-521
               

               
Cow position:
               
chr25:346443-346853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
297, 309
               

               
Conread position:
               
113-879
               

               
Cow position:
               
chr25:326494-327266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
114-498
               

               
Cow position:
               
chr25:414698-414317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
283, 237
               

               
Conread position:
               
114-658
               

               
Cow position:
               
chr25:33144849-33145388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 21
               

               
Conread position:
               
114-786
               

               
Cow position:
               
chr25:34433522-34434176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 53
               

               
Conread position:
               
115-411
               

               
Cow position:
               
chr25:366724-367020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
103, 107
               

               
Conread position:
               
115-846
               

               
Cow position:
               
chr25:34446937-34447667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 299
               

               
Conread position:
               
116-425
               

               
Cow position:
               
chr25:24398738-24398431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
296, 0
               

               
Conread position:
               
116-535
               

               
Cow position:
               
chr25:3675992-3676411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
134, 126
               

               
Conread position:
               
117-369
               

               
Cow position:
               
chr25:427330-427582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
116, 131
               

               
Conread position:
               
117-890
               

               
Cow position:
               
chr25:33306461-33305700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
375, 116
               

               
Conread position:
               
118-520
               

               
Cow position:
               
chr25:4657463-4657061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
286, 282
               

               
Conread position:
               
118-692
               

               
Cow position:
               
chr25:34473509-34474080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 139
               

               
Conread position:
               
121-675
               

               
Cow position:
               
chr25:3636557-3636003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
279, 284
               

               
Conread position:
               
129-470
               

               
Cow position:
               
chr25:34733996-34733655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
266, 275
               

               
Conread position:
               
130-578
               

               
Cow position:
               
chr25:33529028-33529476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
298, 282
               

               
Conread position:
               
133-680
               

               
Cow position:
               
chr25:23420316-23420863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
135-786
               

               
Cow position:
               
chr25:34446873-34447524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 277
               

               
Conread position:
               
137-495
               

               
Cow position:
               
chr25:33506769-33507127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
267, 263
               

               
Conread position:
               
140-806
               

               
Cow position:
               
chr25:34762853-34763513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 271
               

               
Conread position:
               
168-753
               

               
Cow position:
               
chr25:24385366-24384779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
8, 100
               

               
Conread position:
               
187-710
               

               
Cow position:
               
chr25:22235816-22236339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
59, 52
               

               
Conread position:
               
189-805
               

               
Cow position:
               
chr25:326486-327108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
195-575
               

               
Cow position:
               
chr25:3675987-3676367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
204, 209
               

               
Conread position:
               
195-773
               

               
Cow position:
               
chr25:33144844-33145419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 0
               

               
Conread position:
               
195-780
               

               
Cow position:
               
chr25:3663926-3664511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 209
               

               
Conread position:
               
196-836
               

               
Cow position:
               
chr25:33157477-33156838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 222
               

               
Conread position:
               
200-522
               

               
Cow position:
               
chr25:366725-367047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
200-546
               

               
Cow position:
               
chr25:346448-346794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
172, 150
               

               
Conread position:
               
200-780
               

               
Cow position:
               
chr25:34713950-34714530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
202-780
               

               
Cow position:
               
chr25:34473509-34474084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
215-544
               

               
Cow position:
               
chr25:34733994-34733664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
196, 203
               

               
Conread position:
               
215-604
               

               
Cow position:
               
chr25:33506763-33507152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
189, 185
               

               
Conread position:
               
217-780
               

               
Cow position:
               
chr25:23420316-23420879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
223-658
               

               
Cow position:
               
chr25:33529037-33529472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
181, 177
               

               
Conread position:
               
223-783
               

               
Cow position:
               
chr25:33127656-33128217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
224-666
               

               
Cow position:
               
chr25:414751-414317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
199, 56
               

               
Conread position:
               
237-886
               

               
Cow position:
               
chr25:34770171-34769522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
626, 573
               

               
Conread position:
               
272-797
               

               
Cow position:
               
chr25:24385344-24384819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
278-716
               

               
Cow position:
               
chr25:36844626-36844197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
281-780
               

               
Cow position:
               
chr25:23267499-23267007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
362, 202
               

               
Conread position:
               
281-787
               

               
Cow position:
               
chr25:33144846-33145349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 132
               

               
Conread position:
               
283-768
               

               
Cow position:
               
chr25:22235828-22236313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 130
               

               
Conread position:
               
284-690
               

               
Cow position:
               
chr25:3675992-3676398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
116, 121
               

               
Conread position:
               
284-840
               

               
Cow position:
               
chr25:34762829-34763381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 204
               

               
Conread position:
               
285-529
               

               
Cow position:
               
chr25:427330-427574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
285-847
               

               
Cow position:
               
chr25:3663932-3664493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 115
               

               
Conread position:
               
298-711
               

               
Cow position:
               
chr25:4657451-4657038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 102
               

               
Conread position:
               
298-742
               

               
Cow position:
               
chr25:33529028-33529472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
110, 134
               

               
Conread position:
               
298-770
               

               
Cow position:
               
chr25:24385402-24384930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
143, 136
               

               
Conread position:
               
303-790
               

               
Cow position:
               
chr25:23420318-23420805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 111
               

               
Conread position:
               
304-574
               

               
Cow position:
               
chr25:34733989-34733719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
96, 101
               

               
Conread position:
               
308-758
               

               
Cow position:
               
chr25:414751-414310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
337-664
               

               
Cow position:
               
chr25:18642202-18641872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
344-839
               

               
Cow position:
               
chr25:34433500-34433988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
162, 105
               

               
Conread position:
               
361-708
               

               
Cow position:
               
chr25:34734016-34733669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
362-790
               

               
Cow position:
               
chr25:36844626-36844207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
367-847
               

               
Cow position:
               
chr25:36800462-36800941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
370-790
               

               
Cow position:
               
chr25:4657463-4657043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
118, 114
               

               
Conread position:
               
395-831
               

               
Cow position:
               
chr25:33127661-33128096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
422-752
               

               
Cow position:
               
chr25:414804-414480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
422-806
               

               
Cow position:
               
chr25:34762799-34763180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
426-783
               

               
Cow position:
               
chr25:34433498-34433852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
219, 106
               

               
Conread position:
               
431-790
               

               
Cow position:
               
chr25:22235892-22236251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
432-877
               

               
Cow position:
               
chr25:23420210-23420638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
102, 65
               

               
Conread position:
               
439-806
               

               
Cow position:
               
chr25:22235816-22236183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
446-876
               

               
Cow position:
               
chr25:36844626-36844205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
447-805
               

               
Cow position:
               
chr25:346443-346801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
192, 197
               

               
Conread position:
               
450-800
               

               
Cow position:
               
chr25:414698-414350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
283, 229
               

               
Conread position:
               
451-781
               

               
Cow position:
               
chr25:366724-367054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
226, 233
               

               
Conread position:
               
466-770
               

               
Cow position:
               
chr25:34733995-34733691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
529-826
               

               
Cow position:
               
chr25:34732615-34732319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
284, 0
               

               
Conread position:
               
539-797
               

               
Cow position:
               
chr25:4657462-4657204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
53, 44
               
Show alignments to all cow chromosomes.