Cow genome map

Conread name: Ss1.1-Pig3-SRG8010C13.3

Conread position: 2-878
Cow position: chr6:49340459-49341334 (view UCSC Genome Browser custom track)
Alignm length: 881
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 9

Conread position: 2-878
Cow position: chr6:49340543-49341418 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 756, 9

Conread position: 5-743
Cow position: chr6:49396023-49396752 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 9

Conread position: 10-409
Cow position: chr6:49341054-49341452 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 0

Conread position: 10-832
Cow position: chr6:49428542-49429363 (view UCSC Genome Browser custom track)
Alignm length: 831
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 156

Conread position: 10-845
Cow position: chr6:49428626-49429460 (view UCSC Genome Browser custom track)
Alignm length: 840
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 404

Conread position: 11-530
Cow position: chr6:49396440-49396959 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 323
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 156, 169

Conread position: 11-651
Cow position: chr6:49396272-49396912 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 166

Conread position: 11-743
Cow position: chr6:49428795-49429525 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 72

Conread position: 11-760
Cow position: chr6:49340719-49341466 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 721, 0

Conread position: 11-767
Cow position: chr6:49395942-49396690 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 181

Conread position: 22-845
Cow position: chr6:49395785-49396601 (view UCSC Genome Browser custom track)
Alignm length: 831
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 71

Conread position: 23-558
Cow position: chr6:49362330-49362853 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 334
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 149, 144

Conread position: 23-774
Cow position: chr6:49428723-49429474 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 60

Conread position: 23-790
Cow position: chr6:49428303-49429070 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 114

Conread position: 23-830
Cow position: chr6:49428471-49429277 (view UCSC Genome Browser custom track)
Alignm length: 816
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 238

Conread position: 28-782
Cow position: chr6:49362095-49362825 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 460
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 50, 66

Conread position: 32-878
Cow position: chr6:49340404-49341250 (view UCSC Genome Browser custom track)
Alignm length: 851
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 135

Conread position: 46-832
Cow position: chr6:49428242-49429027 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 44

Conread position: 55-714
Cow position: chr6:49396232-49396891 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 359

Conread position: 100-786
Cow position: chr6:49340388-49341074 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 67

Conread position: 104-835
Cow position: chr6:49395783-49396507 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 433
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 78, 72

Conread position: 118-790
Cow position: chr6:49428230-49428902 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 62

Conread position: 144-807
Cow position: chr6:49361958-49362608 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 405
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 8, 209

Conread position: 195-845
Cow position: chr6:49428223-49428871 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 69

Conread position: 242-878
Cow position: chr6:49340362-49340998 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 170

Conread position: 363-836
Cow position: chr6:49428222-49428695 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 52

Conread position: 493-786
Cow position: chr6:49340361-49340654 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.